RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-213ENST00000571643 DGKHQ86XP1 1220 aa4.01□□□□□ -1.77
CDC27-213ENST00000571643 C12orf76Q8N812 135 aaPredicted RBP4.01□□□□□ -1.77
CDC27-213ENST00000571643 ZC3H10Q96K80 434 aaKnown RBP4.01□□□□□ -1.77
CDC27-213ENST00000571643 HIST1H2AAQ96QV6 131 aa4.01□□□□□ -1.77
CDC27-213ENST00000571643 HERPUD2Q9BSE4 406 aa4.01□□□□□ -1.77
CDC27-213ENST00000571643 SYT17Q9BSW7 474 aa4.01□□□□□ -1.77
CDC27-213ENST00000571643 CINPQ9BW66 212 aaPredicted RBP4.01□□□□□ -1.77
CDC27-213ENST00000571643 SPRTNQ9H040 489 aaPredicted RBP4.01□□□□□ -1.77
CDC27-213ENST00000571643 RETREG1Q9H6L5 497 aa4.01□□□□□ -1.77
CDC27-213ENST00000571643 PTPRHQ9HD43 1115 aa4.01□□□□□ -1.77
CDC27-213ENST00000571643 CWC25Q9NXE8 425 aaPredicted RBP4.01□□□□□ -1.77
CDC27-213ENST00000571643 COL20A1Q9P218 1284 aa4.01□□□□□ -1.77
CDC27-213ENST00000571643 DKK4Q9UBT3 224 aa4.01□□□□□ -1.77
CDC27-213ENST00000571643 DBF4Q9UBU7 674 aaPredicted RBP4.01□□□□□ -1.77
CDC27-213ENST00000571643 ZNF212Q9UDV6 495 aa4.01□□□□□ -1.77
CDC27-213ENST00000571643 TAGLN3Q9UI15 199 aa4.01□□□□□ -1.77
CDC27-213ENST00000571643 ITGB1BP2Q9UKP3 347 aa4.01□□□□□ -1.77
CDC27-213ENST00000571643 RIMKLBQ9ULI2 386 aa4.01□□□□□ -1.77
CDC27-213ENST00000571643 AFG3L2Q9Y4W6 797 aa4.01□□□□□ -1.77
CDC27-213ENST00000571643 C4AP0C0L4 1744 aa4.01□□□□□ -1.77
CDC27-213ENST00000571643 IBTKQ9P2D0 1353 aaPredicted RBP4.01□□□□□ -1.77
CDC27-213ENST00000571643 ZMYM2Q9UBW7 1377 aa4.01□□□□□ -1.77
CDC27-213ENST00000571643 DYTNA2CJ06 578 aa4□□□□□ -1.77
CDC27-213ENST00000571643 TPP1O14773 563 aa4□□□□□ -1.77
CDC27-213ENST00000571643 INSIG1O15503 277 aa4□□□□□ -1.77
CDC27-213ENST00000571643 MMP10P09238 476 aa4□□□□□ -1.77
CDC27-213ENST00000571643 NBPF7P0C2Y1 421 aaPredicted RBP4□□□□□ -1.77
CDC27-213ENST00000571643 HGFP14210 728 aa4□□□□□ -1.77
CDC27-213ENST00000571643 SCP2P22307 547 aa4□□□□□ -1.77
CDC27-213ENST00000571643 PEX2P28328 305 aa4□□□□□ -1.77
CDC27-213ENST00000571643 HTR3AP46098 478 aa4□□□□□ -1.77
CDC27-213ENST00000571643 ITGA8P53708 1063 aa4□□□□□ -1.77
CDC27-213ENST00000571643 TERF1P54274 439 aa4□□□□□ -1.77
CDC27-213ENST00000571643 GEMIN4P57678 1058 aaKnown RBP4□□□□□ -1.77
CDC27-213ENST00000571643 DCTN1Q14203 1278 aa4□□□□□ -1.77
CDC27-213ENST00000571643 MFSD13AQ14CX5 517 aa4□□□□□ -1.77
CDC27-213ENST00000571643 KIAA0753Q2KHM9 967 aa4□□□□□ -1.77
CDC27-213ENST00000571643 CCDC92Q53HC0 331 aaPredicted RBP4□□□□□ -1.77
CDC27-213ENST00000571643 C3orf38Q5JPI3 329 aa4□□□□□ -1.77
CDC27-213ENST00000571643 FAM83BQ5T0W9 1011 aa4□□□□□ -1.77
CDC27-213ENST00000571643 CCDC30Q5VVM6 783 aa4□□□□□ -1.77
CDC27-213ENST00000571643 ANO1Q5XXA6 986 aa4□□□□□ -1.77
CDC27-213ENST00000571643 ERAP2Q6P179 960 aa4□□□□□ -1.77
CDC27-213ENST00000571643 BHLHA9Q7RTU4 235 aa4□□□□□ -1.77
CDC27-213ENST00000571643 KCTD20Q7Z5Y7 419 aa4□□□□□ -1.77
CDC27-213ENST00000571643 TECPR1Q7Z6L1 1165 aa4□□□□□ -1.77
CDC27-213ENST00000571643 ZNF354CQ86Y25 554 aa4□□□□□ -1.77
CDC27-213ENST00000571643 ANKRD42Q8N9B4 389 aa4□□□□□ -1.77
CDC27-213ENST00000571643 FAM156AQ8NDB6 213 aa4□□□□□ -1.77
CDC27-213ENST00000571643 MAP4K1Q92918 833 aa4□□□□□ -1.77
CDC27-213ENST00000571643 SKA1Q96BD8 255 aa4□□□□□ -1.77
CDC27-213ENST00000571643 WDYHV1Q96HA8 205 aa4□□□□□ -1.77
CDC27-213ENST00000571643 STRBPQ96SI9 672 aaKnown RBP4□□□□□ -1.77
CDC27-213ENST00000571643 NYXQ9GZU5 481 aa4□□□□□ -1.77
CDC27-213ENST00000571643 CHST8Q9H2A9 424 aa4□□□□□ -1.77
CDC27-213ENST00000571643 DDX21Q9NR30 783 aaKnown RBP eCLIP4□□□□□ -1.77
CDC27-213ENST00000571643 HYPKQ9NX55 129 aa4□□□□□ -1.77
CDC27-213ENST00000571643 CLIC5Q9NZA1 410 aa4□□□□□ -1.77
CDC27-213ENST00000571643 CAPN11Q9UMQ6 739 aa4□□□□□ -1.77
CDC27-213ENST00000571643 ZBTB1Q9Y2K1 713 aa4□□□□□ -1.77
CDC27-213ENST00000571643 USP16Q9Y5T5 823 aa4□□□□□ -1.77
CDC27-213ENST00000571643 NRXN2Q9P2S2 1712 aa4□□□□□ -1.77
CDC27-213ENST00000571643 CARMIL3Q8ND23 1372 aa4□□□□□ -1.77
CDC27-213ENST00000571643 SCN7AQ01118 1682 aa4□□□□□ -1.77
CDC27-213ENST00000571643 MAP3K15Q6ZN16 1313 aa3.99□□□□□ -1.77
CDC27-213ENST00000571643 RIC1Q4ADV7 1423 aa3.99□□□□□ -1.77
CDC27-213ENST00000571643 C10orf71Q711Q0 1435 aa3.99□□□□□ -1.77
CDC27-213ENST00000571643 ATP10DQ9P241 1426 aa3.99□□□□□ -1.77
CDC27-213ENST00000571643 FAM90A10PA6NDY2 464 aa3.99□□□□□ -1.77
CDC27-213ENST00000571643 KCNQ3O43525 872 aa3.99□□□□□ -1.77
CDC27-213ENST00000571643 CNOT3O75175 753 aaKnown RBP3.99□□□□□ -1.77
CDC27-213ENST00000571643 CAMTA2O94983 1202 aa3.99□□□□□ -1.77
CDC27-213ENST00000571643 OAZ2O95190 189 aa3.99□□□□□ -1.77
CDC27-213ENST00000571643 RPN1P04843 607 aaKnown RBP3.99□□□□□ -1.77
CDC27-213ENST00000571643 TRIM27P14373 513 aa3.99□□□□□ -1.77
CDC27-213ENST00000571643 IL1R1P14778 569 aa3.99□□□□□ -1.77
CDC27-213ENST00000571643 DGKQP52824 942 aa3.99□□□□□ -1.77
CDC27-213ENST00000571643 PDE1CQ14123 709 aaPredicted RBP3.99□□□□□ -1.77
CDC27-213ENST00000571643 PUM3Q15397 648 aaKnown RBP3.99□□□□□ -1.77
CDC27-213ENST00000571643 RBMS2Q15434 407 aaKnown RBP3.99□□□□□ -1.77
CDC27-213ENST00000571643 PFKFB3Q16875 520 aaPredicted RBP3.99□□□□□ -1.77
CDC27-213ENST00000571643 SLC4A8Q2Y0W8 1093 aa3.99□□□□□ -1.77
CDC27-213ENST00000571643 ALDH1L2Q3SY69 923 aa3.99□□□□□ -1.77
CDC27-213ENST00000571643 ZNF260Q3ZCT1 412 aa3.99□□□□□ -1.77
CDC27-213ENST00000571643 SLC9C1Q4G0N8 1177 aa3.99□□□□□ -1.77
CDC27-213ENST00000571643 CCDC184Q52MB2 194 aa3.99□□□□□ -1.77
CDC27-213ENST00000571643 PARP10Q53GL7 1025 aa3.99□□□□□ -1.77
CDC27-213ENST00000571643 TMTC4Q5T4D3 741 aa3.99□□□□□ -1.77
CDC27-213ENST00000571643 PLAG1Q6DJT9 500 aa3.99□□□□□ -1.77
CDC27-213ENST00000571643 AWAT2Q6E213 333 aa3.99□□□□□ -1.77
CDC27-213ENST00000571643 KIF6Q6ZMV9 814 aa3.99□□□□□ -1.77
CDC27-213ENST00000571643 MMS22LQ6ZRQ5 1243 aa3.99□□□□□ -1.77
CDC27-213ENST00000571643 UBE2Q1Q7Z7E8 422 aa3.99□□□□□ -1.77
CDC27-213ENST00000571643 ANKRD13BQ86YJ7 626 aa3.99□□□□□ -1.77
CDC27-213ENST00000571643 TTC30BQ8N4P2 665 aa3.99□□□□□ -1.77
CDC27-213ENST00000571643 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.99□□□□□ -1.77
CDC27-213ENST00000571643 MBD3L2Q8NHZ7 208 aaPredicted RBP3.99□□□□□ -1.77
CDC27-213ENST00000571643 MPLKIPQ8TAP9 179 aa3.99□□□□□ -1.77
CDC27-213ENST00000571643 EDC3Q96F86 508 aaKnown RBP3.99□□□□□ -1.77
CDC27-213ENST00000571643 MPP4Q96JB8 637 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms