RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 PPP1R2P3Q6NXS1 205 aa13.78□□□□□ -0.2
CCDC40-205ENST00000571028 C12orf40Q86WS4 652 aa13.78□□□□□ -0.2
CCDC40-205ENST00000571028 SLC41A1Q8IVJ1 513 aa13.78□□□□□ -0.2
CCDC40-205ENST00000571028 ZNF276Q8N554 614 aa13.78□□□□□ -0.2
CCDC40-205ENST00000571028 C3orf20Q8ND61 904 aa13.78□□□□□ -0.2
CCDC40-205ENST00000571028 KCNV2Q8TDN2 545 aa13.78□□□□□ -0.2
CCDC40-205ENST00000571028 FOXJ1Q92949 421 aa13.78□□□□□ -0.2
CCDC40-205ENST00000571028 TRIM11Q96F44 468 aa13.78□□□□□ -0.2
CCDC40-205ENST00000571028 SERPINB11Q96P15 392 aa13.78□□□□□ -0.2
CCDC40-205ENST00000571028 PANX2Q96RD6 677 aa13.78□□□□□ -0.2
CCDC40-205ENST00000571028 TBCBQ99426 244 aa13.78□□□□□ -0.2
CCDC40-205ENST00000571028 PACSIN1Q9BY11 444 aa13.78□□□□□ -0.2
CCDC40-205ENST00000571028 TBC1D14Q9P2M4 693 aa13.78□□□□□ -0.2
CCDC40-205ENST00000571028 DKK4Q9UBT3 224 aa13.78□□□□□ -0.2
CCDC40-205ENST00000571028 TMEM59LQ9UK28 342 aa13.78□□□□□ -0.2
CCDC40-205ENST00000571028 STAP1Q9ULZ2 295 aa13.78□□□□□ -0.2
CCDC40-205ENST00000571028 MEI4A8MW99 385 aa13.77□□□□□ -0.21
CCDC40-205ENST00000571028 GJB3O75712 270 aa13.77□□□□□ -0.21
CCDC40-205ENST00000571028 KLKB1P03952 638 aa13.77□□□□□ -0.21
CCDC40-205ENST00000571028 GPD1P21695 349 aa13.77□□□□□ -0.21
CCDC40-205ENST00000571028 SDC4P31431 198 aa13.77□□□□□ -0.21
CCDC40-205ENST00000571028 RFC1P35251 1148 aaPredicted RBP13.77□□□□□ -0.21
CCDC40-205ENST00000571028 SCNN1AP37088 669 aa13.77□□□□□ -0.21
CCDC40-205ENST00000571028 WASP42768 502 aa13.77□□□□□ -0.21
CCDC40-205ENST00000571028 ABCG1P45844 678 aa13.77□□□□□ -0.21
CCDC40-205ENST00000571028 HARS2P49590 506 aaKnown RBP13.77□□□□□ -0.21
CCDC40-205ENST00000571028 GALCP54803 685 aa13.77□□□□□ -0.21
CCDC40-205ENST00000571028 RPL7AP62424 266 aaKnown RBP13.77□□□□□ -0.21
CCDC40-205ENST00000571028 GAD2Q05329 585 aa13.77□□□□□ -0.21
CCDC40-205ENST00000571028 DEUP1Q05D60 604 aa13.77□□□□□ -0.21
CCDC40-205ENST00000571028 CYP4F3Q08477 520 aa13.77□□□□□ -0.21
CCDC40-205ENST00000571028 C15orf59Q2T9L4 293 aaPredicted RBP13.77□□□□□ -0.21
CCDC40-205ENST00000571028 ASTE1Q2TB18 679 aaPredicted RBP13.77□□□□□ -0.21
CCDC40-205ENST00000571028 DENND4CQ5VZ89 1909 aa13.77□□□□□ -0.21
CCDC40-205ENST00000571028 RHBDF2Q6PJF5 856 aa13.77□□□□□ -0.21
CCDC40-205ENST00000571028 TPGS1Q6ZTW0 290 aa13.77□□□□□ -0.21
CCDC40-205ENST00000571028 GLRX5Q86SX6 157 aa13.77□□□□□ -0.21
CCDC40-205ENST00000571028 SLCO6A1Q86UG4 719 aa13.77□□□□□ -0.21
CCDC40-205ENST00000571028 GALNT15Q8N3T1 639 aa13.77□□□□□ -0.21
CCDC40-205ENST00000571028 ANP32BQ92688 251 aaKnown RBP13.77□□□□□ -0.21
CCDC40-205ENST00000571028 BHMTQ93088 406 aa13.77□□□□□ -0.21
CCDC40-205ENST00000571028 PLD4Q96BZ4 506 aa13.77□□□□□ -0.21
CCDC40-205ENST00000571028 VCPIP1Q96JH7 1222 aa13.77□□□□□ -0.21
CCDC40-205ENST00000571028 DCBLD2Q96PD2 775 aa13.77□□□□□ -0.21
CCDC40-205ENST00000571028 ISCUQ9H1K1 167 aa13.77□□□□□ -0.21
CCDC40-205ENST00000571028 KIAA1522Q9P206 1035 aaPredicted RBP13.77□□□□□ -0.21
CCDC40-205ENST00000571028 DEC1Q9P2X7 70 aa13.77□□□□□ -0.21
CCDC40-205ENST00000571028 PCOLCE2Q9UKZ9 415 aa13.77□□□□□ -0.21
CCDC40-205ENST00000571028 AGO1Q9UL18 857 aaKnown RBP13.77□□□□□ -0.21
CCDC40-205ENST00000571028 HBS1LQ9Y450 684 aaKnown RBP13.77□□□□□ -0.21
CCDC40-205ENST00000571028 A0A0A0MRY4 1105 aa13.76□□□□□ -0.21
CCDC40-205ENST00000571028 GOLGA6L7A0A1B0GV03 622 aa13.76□□□□□ -0.21
CCDC40-205ENST00000571028 SIGLEC16A6NMB1 481 aa13.76□□□□□ -0.21
CCDC40-205ENST00000571028 GOLGA8CPA6NN73 597 aa13.76□□□□□ -0.21
CCDC40-205ENST00000571028 IRAK2O43187 625 aa13.76□□□□□ -0.21
CCDC40-205ENST00000571028 TSPAN3O60637 253 aa13.76□□□□□ -0.21
CCDC40-205ENST00000571028 CER1O95813 267 aa13.76□□□□□ -0.21
CCDC40-205ENST00000571028 APOEP02649 317 aa13.76□□□□□ -0.21
CCDC40-205ENST00000571028 PRB1P04280 392 aa13.76□□□□□ -0.21
CCDC40-205ENST00000571028 H2AFZP0C0S5 128 aa13.76□□□□□ -0.21
CCDC40-205ENST00000571028 NTSR1P30989 418 aa13.76□□□□□ -0.21
CCDC40-205ENST00000571028 MAMLD1Q13495 774 aa13.76□□□□□ -0.21
CCDC40-205ENST00000571028 CCDC14Q49A88 953 aa13.76□□□□□ -0.21
CCDC40-205ENST00000571028 RAB6CQ53S08 254 aa13.76□□□□□ -0.21
CCDC40-205ENST00000571028 LY6G5CQ5SRR4 150 aa13.76□□□□□ -0.21
CCDC40-205ENST00000571028 HTR3DQ70Z44 454 aa13.76□□□□□ -0.21
CCDC40-205ENST00000571028 H2AFVQ71UI9 128 aa13.76□□□□□ -0.21
CCDC40-205ENST00000571028 SND1Q7KZF4 910 aaKnown RBP eCLIP13.76□□□□□ -0.21
CCDC40-205ENST00000571028 BEND5Q7L4P6 421 aa13.76□□□□□ -0.21
CCDC40-205ENST00000571028 TMPRSS7Q7RTY8 843 aa13.76□□□□□ -0.21
CCDC40-205ENST00000571028 CHPFQ8IZ52 775 aa13.76□□□□□ -0.21
CCDC40-205ENST00000571028 NAT16Q8N8M0 369 aa13.76□□□□□ -0.21
CCDC40-205ENST00000571028 ARHGEF26Q96DR7 871 aa13.76□□□□□ -0.21
CCDC40-205ENST00000571028 FCRL2Q96LA5 508 aaPredicted RBP13.76□□□□□ -0.21
CCDC40-205ENST00000571028 NPY6RQ99463 290 aa13.76□□□□□ -0.21
CCDC40-205ENST00000571028 CDC6Q99741 560 aa13.76□□□□□ -0.21
CCDC40-205ENST00000571028 BAG1Q99933 345 aaPredicted RBP13.76□□□□□ -0.21
CCDC40-205ENST00000571028 DCLK3Q9C098 648 aa13.76□□□□□ -0.21
CCDC40-205ENST00000571028 RAB6CQ9H0N0 254 aa13.76□□□□□ -0.21
CCDC40-205ENST00000571028 PARVAQ9NVD7 372 aa13.76□□□□□ -0.21
CCDC40-205ENST00000571028 CACNA2D2Q9NY47 1150 aa13.76□□□□□ -0.21
CCDC40-205ENST00000571028 TLR6Q9Y2C9 796 aa13.76□□□□□ -0.21
CCDC40-205ENST00000571028 TNRC6BQ9UPQ9 1833 aaKnown RBP13.76□□□□□ -0.21
CCDC40-205ENST00000571028 PCNX2A6NKB5 2137 aa13.75□□□□□ -0.21
CCDC40-205ENST00000571028 A0A087WV48 116 aa13.75□□□□□ -0.21
CCDC40-205ENST00000571028 TCRBV5S1A1TA0A578 114 aa13.75□□□□□ -0.21
CCDC40-205ENST00000571028 C2CD4BA6NLJ0 364 aa13.75□□□□□ -0.21
CCDC40-205ENST00000571028 TK2O00142 265 aa13.75□□□□□ -0.21
CCDC40-205ENST00000571028 GREM1O60565 184 aa13.75□□□□□ -0.21
CCDC40-205ENST00000571028 MYBL1P10243 752 aa13.75□□□□□ -0.21
CCDC40-205ENST00000571028 NDUFV2P19404 249 aa13.75□□□□□ -0.21
CCDC40-205ENST00000571028 PSMA2P25787 234 aa13.75□□□□□ -0.21
CCDC40-205ENST00000571028 CYLC1P35663 651 aaPredicted RBP13.75□□□□□ -0.21
CCDC40-205ENST00000571028 GSCP56915 257 aaPredicted RBP13.75□□□□□ -0.21
CCDC40-205ENST00000571028 GSDMDP57764 484 aa13.75□□□□□ -0.21
CCDC40-205ENST00000571028 ANO4Q32M45 955 aa13.75□□□□□ -0.21
CCDC40-205ENST00000571028 SLC25A52Q3SY17 297 aa13.75□□□□□ -0.21
CCDC40-205ENST00000571028 PLEKHA7Q6IQ23 1121 aa13.75□□□□□ -0.21
CCDC40-205ENST00000571028 SCYL2Q6P3W7 929 aa13.75□□□□□ -0.21
CCDC40-205ENST00000571028 IL27RAQ6UWB1 636 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms