RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 E5RJQ4 531 aa4.63□□□□□ -1.67
NUP88-202ENST00000570937 DSCR3O14972 297 aa4.63□□□□□ -1.67
NUP88-202ENST00000570937 NCK2O43639 380 aa4.63□□□□□ -1.67
NUP88-202ENST00000570937 BBOX1O75936 387 aa4.63□□□□□ -1.67
NUP88-202ENST00000570937 NTSR2O95665 410 aa4.63□□□□□ -1.67
NUP88-202ENST00000570937 MYL3P08590 195 aa4.63□□□□□ -1.67
NUP88-202ENST00000570937 NBPF7P0C2Y1 421 aaPredicted RBP4.63□□□□□ -1.67
NUP88-202ENST00000570937 TMIGD3P0DMS9 266 aaPredicted RBP4.63□□□□□ -1.67
NUP88-202ENST00000570937 HARSP12081 509 aaKnown RBP4.63□□□□□ -1.67
NUP88-202ENST00000570937 ATP5F1P24539 256 aaPredicted RBP4.63□□□□□ -1.67
NUP88-202ENST00000570937 PBX1P40424 430 aa4.63□□□□□ -1.67
NUP88-202ENST00000570937 AK2P54819 239 aa4.63□□□□□ -1.67
NUP88-202ENST00000570937 PMS2P11Q13670 270 aa4.63□□□□□ -1.67
NUP88-202ENST00000570937 ZNF268Q14587 947 aaPredicted RBP4.63□□□□□ -1.67
NUP88-202ENST00000570937 SLC35G1Q2M3R5 365 aa4.63□□□□□ -1.67
NUP88-202ENST00000570937 CRY2Q49AN0 593 aa4.63□□□□□ -1.67
NUP88-202ENST00000570937 AWAT1Q58HT5 328 aa4.63□□□□□ -1.67
NUP88-202ENST00000570937 CCDC181Q5TID7 509 aa4.63□□□□□ -1.67
NUP88-202ENST00000570937 IZUMO3Q5VZ72 239 aa4.63□□□□□ -1.67
NUP88-202ENST00000570937 FAM90A2PQ658T7 463 aa4.63□□□□□ -1.67
NUP88-202ENST00000570937 CLASRPQ8N2M8 674 aaKnown RBP4.63□□□□□ -1.67
NUP88-202ENST00000570937 OR2C3Q8N628 320 aa4.63□□□□□ -1.67
NUP88-202ENST00000570937 PI4KAP1Q8N8J0 262 aa4.63□□□□□ -1.67
NUP88-202ENST00000570937 CCDC191Q8NCU4 936 aa4.63□□□□□ -1.67
NUP88-202ENST00000570937 MAP4K1Q92918 833 aa4.63□□□□□ -1.67
NUP88-202ENST00000570937 RIPOR3Q96MK2 946 aa4.63□□□□□ -1.67
NUP88-202ENST00000570937 MYD88Q99836 296 aa4.63□□□□□ -1.67
NUP88-202ENST00000570937 NUDT22Q9BRQ3 303 aa4.63□□□□□ -1.67
NUP88-202ENST00000570937 PCDHAC1Q9H158 963 aa4.63□□□□□ -1.67
NUP88-202ENST00000570937 SAP30LQ9HAJ7 183 aa4.63□□□□□ -1.67
NUP88-202ENST00000570937 USP29Q9HBJ7 922 aa4.63□□□□□ -1.67
NUP88-202ENST00000570937 CWC25Q9NXE8 425 aaPredicted RBP4.63□□□□□ -1.67
NUP88-202ENST00000570937 RGL1Q9NZL6 768 aa4.63□□□□□ -1.67
NUP88-202ENST00000570937 KLHL13Q9P2N7 655 aa4.63□□□□□ -1.67
NUP88-202ENST00000570937 RNF7Q9UBF6 113 aa4.63□□□□□ -1.67
NUP88-202ENST00000570937 PHTF1Q9UMS5 762 aa4.63□□□□□ -1.67
NUP88-202ENST00000570937 UBN2Q6ZU65 1347 aa4.63□□□□□ -1.67
NUP88-202ENST00000570937 SCN7AQ01118 1682 aa4.62□□□□□ -1.67
NUP88-202ENST00000570937 TP73O15350 636 aa4.62□□□□□ -1.67
NUP88-202ENST00000570937 RNF8O76064 485 aa4.62□□□□□ -1.67
NUP88-202ENST00000570937 NDST3O95803 873 aa4.62□□□□□ -1.67
NUP88-202ENST00000570937 GALNSP34059 522 aa4.62□□□□□ -1.67
NUP88-202ENST00000570937 SLC14A1Q13336 389 aa4.62□□□□□ -1.67
NUP88-202ENST00000570937 PICALMQ13492 652 aa4.62□□□□□ -1.67
NUP88-202ENST00000570937 KLF9Q13886 244 aaPredicted RBP4.62□□□□□ -1.67
NUP88-202ENST00000570937 SEC23BQ15437 767 aa4.62□□□□□ -1.67
NUP88-202ENST00000570937 TRIP6Q15654 476 aaKnown RBP4.62□□□□□ -1.67
NUP88-202ENST00000570937 MAPKAPK3Q16644 382 aa4.62□□□□□ -1.67
NUP88-202ENST00000570937 LONRF1Q17RB8 773 aa4.62□□□□□ -1.67
NUP88-202ENST00000570937 ALDH1L2Q3SY69 923 aa4.62□□□□□ -1.67
NUP88-202ENST00000570937 TMTC4Q5T4D3 741 aa4.62□□□□□ -1.67
NUP88-202ENST00000570937 SLC2A7Q6PXP3 512 aa4.62□□□□□ -1.67
NUP88-202ENST00000570937 P3H2Q8IVL5 708 aa4.62□□□□□ -1.67
NUP88-202ENST00000570937 TXLNBQ8N3L3 684 aa4.62□□□□□ -1.67
NUP88-202ENST00000570937 GLIS1Q8NBF1 620 aa4.62□□□□□ -1.67
NUP88-202ENST00000570937 LINS1Q8NG48 757 aa4.62□□□□□ -1.67
NUP88-202ENST00000570937 OSR1Q8TAX0 266 aaPredicted RBP4.62□□□□□ -1.67
NUP88-202ENST00000570937 PIGOQ8TEQ8 1089 aa4.62□□□□□ -1.67
NUP88-202ENST00000570937 OVCA2Q8WZ82 227 aa4.62□□□□□ -1.67
NUP88-202ENST00000570937 PRR11Q96HE9 360 aaPredicted RBP4.62□□□□□ -1.67
NUP88-202ENST00000570937 ISCA1Q9BUE6 129 aa4.62□□□□□ -1.67
NUP88-202ENST00000570937 TAOK3Q9H2K8 898 aa4.62□□□□□ -1.67
NUP88-202ENST00000570937 NECTIN3Q9NQS3 549 aa4.62□□□□□ -1.67
NUP88-202ENST00000570937 TM7SF3Q9NS93 570 aa4.62□□□□□ -1.67
NUP88-202ENST00000570937 TUBA8Q9NY65 449 aaPredicted RBP4.62□□□□□ -1.67
NUP88-202ENST00000570937 CA14Q9ULX7 337 aa4.62□□□□□ -1.67
NUP88-202ENST00000570937 ZNF521Q96K83 1311 aa4.62□□□□□ -1.67
NUP88-202ENST00000570937 RIC1Q4ADV7 1423 aa4.62□□□□□ -1.67
NUP88-202ENST00000570937 KIF13BQ9NQT8 1826 aa4.61□□□□□ -1.67
NUP88-202ENST00000570937 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.61□□□□□ -1.67
NUP88-202ENST00000570937 FAM234BA2RU67 622 aa4.61□□□□□ -1.67
NUP88-202ENST00000570937 KCNU1A8MYU2 1149 aa4.61□□□□□ -1.67
NUP88-202ENST00000570937 TCERG1O14776 1098 aaKnown RBP4.61□□□□□ -1.67
NUP88-202ENST00000570937 HNRNPDLO14979 420 aaKnown RBP4.61□□□□□ -1.67
NUP88-202ENST00000570937 DHHO43323 396 aa4.61□□□□□ -1.67
NUP88-202ENST00000570937 MOSPD3O75425 235 aa4.61□□□□□ -1.67
NUP88-202ENST00000570937 TOP3BO95985 862 aaKnown RBP4.61□□□□□ -1.67
NUP88-202ENST00000570937 PCCAP05165 728 aaPredicted RBP4.61□□□□□ -1.67
NUP88-202ENST00000570937 EEF1GP26641 437 aaKnown RBP4.61□□□□□ -1.67
NUP88-202ENST00000570937 DUSP1P28562 367 aa4.61□□□□□ -1.67
NUP88-202ENST00000570937 THBS4P35443 961 aa4.61□□□□□ -1.67
NUP88-202ENST00000570937 ARHGAP25P42331 645 aa4.61□□□□□ -1.67
NUP88-202ENST00000570937 JAK3P52333 1124 aa4.61□□□□□ -1.67
NUP88-202ENST00000570937 NSUN2Q08J23 767 aaKnown RBP eCLIP4.61□□□□□ -1.67
NUP88-202ENST00000570937 HNRNPA0Q13151 305 aaKnown RBP4.61□□□□□ -1.67
NUP88-202ENST00000570937 CCDC152Q4G0S7 254 aa4.61□□□□□ -1.67
NUP88-202ENST00000570937 PAPD7Q5XG87 772 aaKnown RBP4.61□□□□□ -1.67
NUP88-202ENST00000570937 UBE2Q1Q7Z7E8 422 aa4.61□□□□□ -1.67
NUP88-202ENST00000570937 DENND1AQ8TEH3 1009 aa4.61□□□□□ -1.67
NUP88-202ENST00000570937 SCARB1Q8WTV0 552 aa4.61□□□□□ -1.67
NUP88-202ENST00000570937 DNAAF4Q8WXU2 420 aa4.61□□□□□ -1.67
NUP88-202ENST00000570937 P2RY11Q96G91 374 aa4.61□□□□□ -1.67
NUP88-202ENST00000570937 CCDC138Q96M89 665 aa4.61□□□□□ -1.67
NUP88-202ENST00000570937 TMEM79Q9BSE2 394 aa4.61□□□□□ -1.67
NUP88-202ENST00000570937 ADGRE3Q9BY15 652 aa4.61□□□□□ -1.67
NUP88-202ENST00000570937 RNF26Q9BY78 433 aaPredicted RBP4.61□□□□□ -1.67
NUP88-202ENST00000570937 VPS33BQ9H267 617 aa4.61□□□□□ -1.67
NUP88-202ENST00000570937 ATP6V0A2Q9Y487 856 aa4.61□□□□□ -1.67
NUP88-202ENST00000570937 PTPRCP08575 1304 aa4.61□□□□□ -1.67
NUP88-202ENST00000570937 UTRNP46939 3433 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms