RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 AGR3Q8TD06 166 aa15.74■□□□□ 0.11
SMG6-207ENST00000570756 BORCS5Q969J3 196 aa15.74■□□□□ 0.11
SMG6-207ENST00000570756 TOP1MTQ969P6 601 aa15.74■□□□□ 0.11
SMG6-207ENST00000570756 PGBD4Q96DM1 585 aa15.74■□□□□ 0.11
SMG6-207ENST00000570756 ASB9Q96DX5 294 aa15.74■□□□□ 0.11
SMG6-207ENST00000570756 ZNF512Q96ME7 567 aaPredicted RBP15.74■□□□□ 0.11
SMG6-207ENST00000570756 CPNE1Q99829 537 aa15.74■□□□□ 0.11
SMG6-207ENST00000570756 GLIS2Q9BZE0 524 aaPredicted RBP15.74■□□□□ 0.11
SMG6-207ENST00000570756 PIM2Q9P1W9 311 aa15.74■□□□□ 0.11
SMG6-207ENST00000570756 RAP2CQ9Y3L5 183 aa15.74■□□□□ 0.11
SMG6-207ENST00000570756 CTDP1Q9Y5B0 961 aaPredicted RBP15.74■□□□□ 0.11
SMG6-207ENST00000570756 ZNF487B1APH4 448 aa15.74■□□□□ 0.11
SMG6-207ENST00000570756 NEMP1O14524 444 aa15.74■□□□□ 0.11
SMG6-207ENST00000570756 ZNF189O75820 626 aaPredicted RBP15.74■□□□□ 0.11
SMG6-207ENST00000570756 PDGFRBP09619 1106 aa15.74■□□□□ 0.11
SMG6-207ENST00000570756 MCF2P10911 925 aa15.74■□□□□ 0.11
SMG6-207ENST00000570756 ZNF12P17014 697 aa15.74■□□□□ 0.11
SMG6-207ENST00000570756 PTPN1P18031 435 aaKnown RBP15.74■□□□□ 0.11
SMG6-207ENST00000570756 ATXN3P54252 364 aaPredicted RBP15.74■□□□□ 0.11
SMG6-207ENST00000570756 PTPN11Q06124 597 aaPredicted RBP15.74■□□□□ 0.11
SMG6-207ENST00000570756 PTK2BQ14289 1009 aa15.74■□□□□ 0.11
SMG6-207ENST00000570756 IL23RQ5VWK5 629 aa15.74■□□□□ 0.11
SMG6-207ENST00000570756 HEATR6Q6AI08 1181 aaKnown RBP15.74■□□□□ 0.11
SMG6-207ENST00000570756 ABHD15Q6UXT9 468 aa15.74■□□□□ 0.11
SMG6-207ENST00000570756 NAPRTQ6XQN6 538 aa15.74■□□□□ 0.11
SMG6-207ENST00000570756 ZBTB33Q86T24 672 aa15.74■□□□□ 0.11
SMG6-207ENST00000570756 ISOC1Q96CN7 298 aa15.74■□□□□ 0.11
SMG6-207ENST00000570756 WDR55Q9H6Y2 383 aaPredicted RBP15.74■□□□□ 0.11
SMG6-207ENST00000570756 OLAHQ9NV23 265 aa15.74■□□□□ 0.11
SMG6-207ENST00000570756 A0A087WXM4 84 aa15.73■□□□□ 0.11
SMG6-207ENST00000570756 SLCO1B7G3V0H7 640 aa15.73■□□□□ 0.11
SMG6-207ENST00000570756 VAPBO95292 243 aa15.73■□□□□ 0.11
SMG6-207ENST00000570756 EDN1P05305 212 aa15.73■□□□□ 0.11
SMG6-207ENST00000570756 NR3C2P08235 984 aa15.73■□□□□ 0.11
SMG6-207ENST00000570756 RAP1GAPP47736 663 aa15.73■□□□□ 0.11
SMG6-207ENST00000570756 NR2C2P49116 596 aa15.73■□□□□ 0.11
SMG6-207ENST00000570756 RPL14P50914 215 aaKnown RBP15.73■□□□□ 0.11
SMG6-207ENST00000570756 ZBED5Q49AG3 693 aa15.73■□□□□ 0.11
SMG6-207ENST00000570756 ZNF667Q5HYK9 610 aa15.73■□□□□ 0.11
SMG6-207ENST00000570756 GPR180Q86V85 440 aa15.73■□□□□ 0.11
SMG6-207ENST00000570756 CLVS1Q8IUQ0 354 aaPredicted RBP15.73■□□□□ 0.11
SMG6-207ENST00000570756 DQX1Q8TE96 717 aaKnown RBP15.73■□□□□ 0.11
SMG6-207ENST00000570756 FAM151AQ8WW52 585 aa15.73■□□□□ 0.11
SMG6-207ENST00000570756 ISL2Q96A47 359 aa15.73■□□□□ 0.11
SMG6-207ENST00000570756 ANKRD36BP1Q96IX9 119 aa15.73■□□□□ 0.11
SMG6-207ENST00000570756 CDHR1Q96JP9 859 aa15.73■□□□□ 0.11
SMG6-207ENST00000570756 ANKRD60Q9BZ19 345 aa15.73■□□□□ 0.11
SMG6-207ENST00000570756 TRPV6Q9H1D0 765 aa15.73■□□□□ 0.11
SMG6-207ENST00000570756 ZNF358Q9NW07 568 aa15.73■□□□□ 0.11
SMG6-207ENST00000570756 GPATCH2LQ9NWQ4 482 aa15.73■□□□□ 0.11
SMG6-207ENST00000570756 SUCOQ9UBS9 1254 aaKnown RBP15.73■□□□□ 0.11
SMG6-207ENST00000570756 VTI1BQ9UEU0 232 aa15.73■□□□□ 0.11
SMG6-207ENST00000570756 CDYLQ9Y232 598 aa15.73■□□□□ 0.11
SMG6-207ENST00000570756 G3V2L1 256 aa15.73■□□□□ 0.11
SMG6-207ENST00000570756 OGTO15294 1046 aa15.73■□□□□ 0.11
SMG6-207ENST00000570756 CLASP2O75122 1294 aaKnown RBP15.73■□□□□ 0.11
SMG6-207ENST00000570756 MPOP05164 745 aa15.73■□□□□ 0.11
SMG6-207ENST00000570756 TCF7P36402 384 aaPredicted RBP15.73■□□□□ 0.11
SMG6-207ENST00000570756 MAGEA12P43365 314 aa15.73■□□□□ 0.11
SMG6-207ENST00000570756 KCTD21Q4G0X4 260 aa15.73■□□□□ 0.11
SMG6-207ENST00000570756 ITPRIPL1Q6GPH6 555 aa15.73■□□□□ 0.11
SMG6-207ENST00000570756 ELMSAN1Q6PJG2 1045 aa15.73■□□□□ 0.11
SMG6-207ENST00000570756 ANKRD23Q86SG2 305 aa15.73■□□□□ 0.11
SMG6-207ENST00000570756 HACE1Q8IYU2 909 aa15.73■□□□□ 0.11
SMG6-207ENST00000570756 ATP6V1E2Q96A05 226 aa15.73■□□□□ 0.11
SMG6-207ENST00000570756 QKIQ96PU8 341 aaKnown RBP eCLIP15.73■□□□□ 0.11
SMG6-207ENST00000570756 EFHD1Q9BUP0 239 aa15.73■□□□□ 0.11
SMG6-207ENST00000570756 MRPL4Q9BYD3 311 aaKnown RBP15.73■□□□□ 0.11
SMG6-207ENST00000570756 HIPK3Q9H422 1215 aa15.73■□□□□ 0.11
SMG6-207ENST00000570756 ZNF385DQ9H6B1 395 aa15.73■□□□□ 0.11
SMG6-207ENST00000570756 PRDM16Q9HAZ2 1276 aa15.73■□□□□ 0.11
SMG6-207ENST00000570756 ZBTB26Q9HCK0 441 aa15.73■□□□□ 0.11
SMG6-207ENST00000570756 PTBP2Q9UKA9 531 aaKnown RBP15.73■□□□□ 0.11
SMG6-207ENST00000570756 CDH7Q9ULB5 785 aa15.73■□□□□ 0.11
SMG6-207ENST00000570756 BRCA1P38398 1863 aaKnown RBP15.72■□□□□ 0.11
SMG6-207ENST00000570756 MDM4O15151 490 aa15.72■□□□□ 0.11
SMG6-207ENST00000570756 POLBP06746 335 aa15.72■□□□□ 0.11
SMG6-207ENST00000570756 SPRP35270 261 aaPredicted RBP15.72■□□□□ 0.11
SMG6-207ENST00000570756 DPP6P42658 865 aa15.72■□□□□ 0.11
SMG6-207ENST00000570756 GPD2P43304 727 aa15.72■□□□□ 0.11
SMG6-207ENST00000570756 SESN2P58004 480 aaPredicted RBP15.72■□□□□ 0.11
SMG6-207ENST00000570756 CRADDP78560 199 aa15.72■□□□□ 0.11
SMG6-207ENST00000570756 RELAQ04206 551 aa15.72■□□□□ 0.11
SMG6-207ENST00000570756 ZNF829Q3KNS6 432 aaPredicted RBP15.72■□□□□ 0.11
SMG6-207ENST00000570756 RAB6CQ53S08 254 aa15.72■□□□□ 0.11
SMG6-207ENST00000570756 PPP6R3Q5H9R7 873 aaPredicted RBP15.72■□□□□ 0.11
SMG6-207ENST00000570756 OR6B2Q6IFH4 312 aa15.72■□□□□ 0.11
SMG6-207ENST00000570756 CMC1Q7Z7K0 106 aa15.72■□□□□ 0.11
SMG6-207ENST00000570756 LRRN4Q8WUT4 740 aa15.72■□□□□ 0.11
SMG6-207ENST00000570756 TMA16Q96EY4 203 aaKnown RBP15.72■□□□□ 0.11
SMG6-207ENST00000570756 ACO2Q99798 780 aaKnown RBP15.72■□□□□ 0.11
SMG6-207ENST00000570756 SYT17Q9BSW7 474 aa15.72■□□□□ 0.11
SMG6-207ENST00000570756 BCO2Q9BYV7 579 aa15.72■□□□□ 0.11
SMG6-207ENST00000570756 RAB6CQ9H0N0 254 aa15.72■□□□□ 0.11
SMG6-207ENST00000570756 SEMA6AQ9H2E6 1030 aa15.72■□□□□ 0.11
SMG6-207ENST00000570756 NGRNQ9NPE2 291 aaKnown RBP15.72■□□□□ 0.11
SMG6-207ENST00000570756 MTMR10Q9NXD2 777 aa15.72■□□□□ 0.11
SMG6-207ENST00000570756 IPO11Q9UI26 975 aaKnown RBP15.72■□□□□ 0.11
SMG6-207ENST00000570756 KIAA1217Q5T5P2 1943 aa15.72■□□□□ 0.11
SMG6-207ENST00000570756 FAM155AB1AL88 458 aaPredicted RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms