RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 SLC16A3O15427 465 aaKnown RBP12.47□□□□□ -0.41
CAPN3-220ENST00000569827 IRAK2O43187 625 aa12.47□□□□□ -0.41
CAPN3-220ENST00000569827 BNIP3LO60238 219 aa12.47□□□□□ -0.41
CAPN3-220ENST00000569827 TBC1D3HP0C7X1 549 aa12.47□□□□□ -0.41
CAPN3-220ENST00000569827 GOT1P17174 413 aa12.47□□□□□ -0.41
CAPN3-220ENST00000569827 TACR2P21452 398 aa12.47□□□□□ -0.41
CAPN3-220ENST00000569827 DRD3P35462 400 aa12.47□□□□□ -0.41
CAPN3-220ENST00000569827 HNF1BP35680 557 aa12.47□□□□□ -0.41
CAPN3-220ENST00000569827 NXPH1P58417 271 aa12.47□□□□□ -0.41
CAPN3-220ENST00000569827 ECT2LQ008S8 904 aa12.47□□□□□ -0.41
CAPN3-220ENST00000569827 CENPCQ03188 943 aa12.47□□□□□ -0.41
CAPN3-220ENST00000569827 RNF219Q5W0B1 726 aaPredicted RBP12.47□□□□□ -0.41
CAPN3-220ENST00000569827 TBC1D3GQ6DHY5 549 aa12.47□□□□□ -0.41
CAPN3-220ENST00000569827 TBC1D3CQ6IPX1 549 aa12.47□□□□□ -0.41
CAPN3-220ENST00000569827 DENND1BQ6P3S1 775 aa12.47□□□□□ -0.41
CAPN3-220ENST00000569827 FBXL19Q6PCT2 694 aa12.47□□□□□ -0.41
CAPN3-220ENST00000569827 SND1Q7KZF4 910 aaKnown RBP eCLIP12.47□□□□□ -0.41
CAPN3-220ENST00000569827 TBC1D3Q8IZP1 549 aaPredicted RBP12.47□□□□□ -0.41
CAPN3-220ENST00000569827 IRGQQ8WZA9 623 aa12.47□□□□□ -0.41
CAPN3-220ENST00000569827 KLK6Q92876 244 aa12.47□□□□□ -0.41
CAPN3-220ENST00000569827 SLC39A13Q96H72 371 aa12.47□□□□□ -0.41
CAPN3-220ENST00000569827 NT5C1BQ96P26 610 aa12.47□□□□□ -0.41
CAPN3-220ENST00000569827 FCRL3Q96P31 734 aaPredicted RBP12.47□□□□□ -0.41
CAPN3-220ENST00000569827 ACP6Q9NPH0 428 aa12.47□□□□□ -0.41
CAPN3-220ENST00000569827 COX16Q9P0S2 106 aa12.47□□□□□ -0.41
CAPN3-220ENST00000569827 ARMCX3Q9UH62 379 aaPredicted RBP12.47□□□□□ -0.41
CAPN3-220ENST00000569827 ADAMTS1Q9UHI8 967 aa12.47□□□□□ -0.41
CAPN3-220ENST00000569827 CYTH4Q9UIA0 394 aa12.47□□□□□ -0.41
CAPN3-220ENST00000569827 FZD4Q9ULV1 537 aa12.47□□□□□ -0.41
CAPN3-220ENST00000569827 SCML1Q9UN30 329 aa12.47□□□□□ -0.41
CAPN3-220ENST00000569827 LRRK1Q38SD2 2015 aa12.47□□□□□ -0.41
CAPN3-220ENST00000569827 C10orf142B7Z368 130 aa12.46□□□□□ -0.41
CAPN3-220ENST00000569827 BRINP1O60477 761 aa12.46□□□□□ -0.41
CAPN3-220ENST00000569827 SRPRAP08240 638 aaKnown RBP12.46□□□□□ -0.41
CAPN3-220ENST00000569827 PAEPP09466 180 aa12.46□□□□□ -0.41
CAPN3-220ENST00000569827 MYF5P13349 255 aa12.46□□□□□ -0.41
CAPN3-220ENST00000569827 TBXAS1P24557 533 aaPredicted RBP12.46□□□□□ -0.41
CAPN3-220ENST00000569827 CCR5P51681 352 aa12.46□□□□□ -0.41
CAPN3-220ENST00000569827 CCDC173Q0VFZ6 552 aa12.46□□□□□ -0.41
CAPN3-220ENST00000569827 CNGA2Q16280 664 aa12.46□□□□□ -0.41
CAPN3-220ENST00000569827 ZNF658Q5TYW1 1059 aaPredicted RBP12.46□□□□□ -0.41
CAPN3-220ENST00000569827 KDM7AQ6ZMT4 941 aa12.46□□□□□ -0.41
CAPN3-220ENST00000569827 KANSL1Q7Z3B3 1105 aa12.46□□□□□ -0.41
CAPN3-220ENST00000569827 CCDC117Q8IWD4 279 aaPredicted RBP12.46□□□□□ -0.41
CAPN3-220ENST00000569827 OR52K2Q8NGK3 314 aa12.46□□□□□ -0.41
CAPN3-220ENST00000569827 SLC39A7Q92504 469 aa12.46□□□□□ -0.41
CAPN3-220ENST00000569827 TSC1Q92574 1164 aa12.46□□□□□ -0.41
CAPN3-220ENST00000569827 NAF1Q96HR8 494 aaKnown RBP12.46□□□□□ -0.41
CAPN3-220ENST00000569827 KREMEN1Q96MU8 473 aa12.46□□□□□ -0.41
CAPN3-220ENST00000569827 SERPINB11Q96P15 392 aa12.46□□□□□ -0.41
CAPN3-220ENST00000569827 UBL7Q96S82 380 aaPredicted RBP12.46□□□□□ -0.41
CAPN3-220ENST00000569827 PRORYQ9H606 182 aa12.46□□□□□ -0.41
CAPN3-220ENST00000569827 FZD3Q9NPG1 666 aa12.46□□□□□ -0.41
CAPN3-220ENST00000569827 TLR6Q9Y2C9 796 aa12.46□□□□□ -0.41
CAPN3-220ENST00000569827 PCDHGA1Q9Y5H4 931 aa12.46□□□□□ -0.41
CAPN3-220ENST00000569827 PIEZO2Q9H5I5 2752 aa12.45□□□□□ -0.42
CAPN3-220ENST00000569827 A0A1W2PQ27 194 aa12.45□□□□□ -0.42
CAPN3-220ENST00000569827 A0A1W2PQ64 194 aa12.45□□□□□ -0.42
CAPN3-220ENST00000569827 FAM170AA1A519 330 aa12.45□□□□□ -0.42
CAPN3-220ENST00000569827 TARSL2A2RTX5 802 aaKnown RBP12.45□□□□□ -0.42
CAPN3-220ENST00000569827 DFNA5O60443 496 aa12.45□□□□□ -0.42
CAPN3-220ENST00000569827 MOCS3O95396 460 aa12.45□□□□□ -0.42
CAPN3-220ENST00000569827 TRUB2O95900 331 aaKnown RBP12.45□□□□□ -0.42
CAPN3-220ENST00000569827 ADH1BP00325 375 aa12.45□□□□□ -0.42
CAPN3-220ENST00000569827 CD44P16070 742 aaKnown RBP12.45□□□□□ -0.42
CAPN3-220ENST00000569827 PRLRP16471 622 aa12.45□□□□□ -0.42
CAPN3-220ENST00000569827 C5AR1P21730 350 aa12.45□□□□□ -0.42
CAPN3-220ENST00000569827 ARRB1P49407 418 aaPredicted RBP12.45□□□□□ -0.42
CAPN3-220ENST00000569827 FKBP3Q00688 224 aaKnown RBP12.45□□□□□ -0.42
CAPN3-220ENST00000569827 CNTN1Q12860 1018 aa12.45□□□□□ -0.42
CAPN3-220ENST00000569827 TAF5Q15542 800 aa12.45□□□□□ -0.42
CAPN3-220ENST00000569827 CCDC40Q4G0X9 1142 aa12.45□□□□□ -0.42
CAPN3-220ENST00000569827 SFMBT2Q5VUG0 894 aa12.45□□□□□ -0.42
CAPN3-220ENST00000569827 NAPEPLDQ6IQ20 393 aa12.45□□□□□ -0.42
CAPN3-220ENST00000569827 LRRC69Q6ZNQ3 347 aa12.45□□□□□ -0.42
CAPN3-220ENST00000569827 Q6ZVU0 165 aa12.45□□□□□ -0.42
CAPN3-220ENST00000569827 CCAR2Q8N163 923 aaKnown RBP12.45□□□□□ -0.42
CAPN3-220ENST00000569827 LMO3Q8TAP4 145 aa12.45□□□□□ -0.42
CAPN3-220ENST00000569827 AZIN2Q96A70 460 aa12.45□□□□□ -0.42
CAPN3-220ENST00000569827 SKA1Q96BD8 255 aa12.45□□□□□ -0.42
CAPN3-220ENST00000569827 DDX50Q9BQ39 737 aaKnown RBP12.45□□□□□ -0.42
CAPN3-220ENST00000569827 ARHGAP20Q9P2F6 1191 aa12.45□□□□□ -0.42
CAPN3-220ENST00000569827 KIAA1257Q9ULG3 409 aa12.45□□□□□ -0.42
CAPN3-220ENST00000569827 PCDHB1Q9Y5F3 818 aa12.45□□□□□ -0.42
CAPN3-220ENST00000569827 E5RJQ4 531 aa12.44□□□□□ -0.42
CAPN3-220ENST00000569827 F5H5T6 163 aa12.44□□□□□ -0.42
CAPN3-220ENST00000569827 RNF103O00237 685 aa12.44□□□□□ -0.42
CAPN3-220ENST00000569827 TRIM38O00635 465 aa12.44□□□□□ -0.42
CAPN3-220ENST00000569827 CAPN9O14815 690 aa12.44□□□□□ -0.42
CAPN3-220ENST00000569827 FFAR2O15552 330 aa12.44□□□□□ -0.42
CAPN3-220ENST00000569827 SIGLEC6O43699 453 aa12.44□□□□□ -0.42
CAPN3-220ENST00000569827 FBXO21O94952 628 aa12.44□□□□□ -0.42
CAPN3-220ENST00000569827 APOEP02649 317 aa12.44□□□□□ -0.42
CAPN3-220ENST00000569827 KRT5P13647 590 aa12.44□□□□□ -0.42
CAPN3-220ENST00000569827 GPD2P43304 727 aa12.44□□□□□ -0.42
CAPN3-220ENST00000569827 NUCB2P80303 420 aa12.44□□□□□ -0.42
CAPN3-220ENST00000569827 INSM1Q01101 510 aaPredicted RBP12.44□□□□□ -0.42
CAPN3-220ENST00000569827 ARID5BQ14865 1188 aa12.44□□□□□ -0.42
CAPN3-220ENST00000569827 ACCSLQ4AC99 568 aa12.44□□□□□ -0.42
CAPN3-220ENST00000569827 AGBL4Q5VU57 503 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms