RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 OR12D3Q9UGF7 316 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 CHMP2BQ9UQN3 213 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 MFHAS1Q9Y4C4 1052 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 TRIM17Q9Y577 477 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 IKBKGQ9Y6K9 419 aa5.53□□□□□ -1.52
SF3B3-213ENST00000569687 CEP350Q5VT06 3117 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 FAM92AA1XBS5 289 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 OR6C75A6NL08 312 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 WASH4PA8MWX3 477 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 CXorf49A8MYA2 514 aaPredicted RBP5.52□□□□□ -1.53
SF3B3-213ENST00000569687 I3L4J1 428 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 RNF103O00237 685 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 ENPP3O14638 875 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 BIRC5O15392 142 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 CREB3O43889 395 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 MFSD11O43934 449 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 TBC1D4O60343 1298 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 RFPL1O75677 317 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 ATP5HO75947 161 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 DDHD2O94830 711 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 TGDSO95455 350 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 AP2A1O95782 977 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 PGAM1P18669 254 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 CCNCP24863 283 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 PTPN3P26045 913 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 CRHR1P34998 444 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 SERPINB6P35237 376 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 CCNFP41002 786 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 SCTRP47872 440 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 MLLT6P55198 1093 aaPredicted RBP5.52□□□□□ -1.53
SF3B3-213ENST00000569687 TPI1P60174 286 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 PPARDQ03181 441 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 YWHAHQ04917 246 aaPredicted RBP5.52□□□□□ -1.53
SF3B3-213ENST00000569687 CDK18Q07002 472 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 SLC20A2Q08357 652 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 AP1B1Q10567 949 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 SMARCB1Q12824 385 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 IFRD2Q12894 506 aaPredicted RBP5.52□□□□□ -1.53
SF3B3-213ENST00000569687 BNIP1Q12981 228 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 USP4Q13107 963 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 EFTUD2Q15029 972 aaKnown RBP eCLIP5.52□□□□□ -1.53
SF3B3-213ENST00000569687 DBN1Q16643 649 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 TEX44Q53QW1 395 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 CLLU1OSQ5K130 101 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 ACBD5Q5T8D3 534 aaPredicted RBP5.52□□□□□ -1.53
SF3B3-213ENST00000569687 MANEALQ5VSG8 457 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 AFMIDQ63HM1 303 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 KCTD11Q693B1 232 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 ITPRIPL1Q6GPH6 555 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 CGB2Q6NT52 195 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 MSANTD2Q6P1R3 559 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 LVRNQ6Q4G3 990 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 MARK2Q7KZI7 788 aaKnown RBP5.52□□□□□ -1.53
SF3B3-213ENST00000569687 PID1Q7Z2X4 250 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 SCD5Q86SK9 330 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 TMEM135Q86UB9 458 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 ZNF280BQ86YH2 543 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 SPATA2LQ8IUW3 424 aaPredicted RBP5.52□□□□□ -1.53
SF3B3-213ENST00000569687 TRIM42Q8IWZ5 723 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 C10orf67Q8IYJ2 551 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 C4orf33Q8N1A6 199 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 CRIPAKQ8N1N5 446 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 ARHGAP18Q8N392 663 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 TAB3Q8N5C8 712 aaPredicted RBP5.52□□□□□ -1.53
SF3B3-213ENST00000569687 PPM1NQ8N819 430 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 URGCPQ8TCY9 931 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 SP7Q8TDD2 431 aaPredicted RBP5.52□□□□□ -1.53
SF3B3-213ENST00000569687 TCP10LQ8TDR4 215 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 LRRC8CQ8TDW0 803 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 ACMSDQ8TDX5 336 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 LINC01599Q8WXQ3 324 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 ARNTL2Q8WYA1 636 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 STAMBPL1Q96FJ0 436 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 CFAP36Q96G28 342 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 APOPT1Q96IL0 206 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 SERAC1Q96JX3 654 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 TEKT5Q96M29 485 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 CEP295NLQ96MC4 621 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 PPP1R2P1Q96PQ5 205 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 OXCT2Q9BYC2 517 aaPredicted RBP5.52□□□□□ -1.53
SF3B3-213ENST00000569687 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.52□□□□□ -1.53
SF3B3-213ENST00000569687 TKTL2Q9H0I9 626 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 TRPV6Q9H1D0 765 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 SMOC2Q9H3U7 446 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 KIF9Q9HAQ2 790 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 RXFP1Q9HBX9 757 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 CASS4Q9NQ75 786 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 SMYD2Q9NRG4 433 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 TMPRSS4Q9NRS4 437 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 FGFR1OP2Q9NVK5 253 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 DDIT4Q9NX09 232 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 TMEM161AQ9NX61 479 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 KLHL14Q9P2G3 628 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 CACNG4Q9UBN1 327 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 GRID1Q9ULK0 1009 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 PHF24Q9UPV7 400 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 SCML2Q9UQR0 700 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 PLLPQ9Y342 182 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 PCDHB11Q9Y5F2 797 aa5.52□□□□□ -1.53
SF3B3-213ENST00000569687 FAM237BA0A1B0GVD1 139 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms