RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 LOC285556D6RIA3 1793 aa8.97□□□□□ -0.97
LINC00558-201ENST00000569422 CITO14578 2027 aa8.97□□□□□ -0.97
LINC00558-201ENST00000569422 F8W810 466 aa8.97□□□□□ -0.97
LINC00558-201ENST00000569422 GSC2O15499 205 aa8.97□□□□□ -0.97
LINC00558-201ENST00000569422 PEX11AO75192 247 aa8.97□□□□□ -0.97
LINC00558-201ENST00000569422 DAB1O75553 588 aa8.97□□□□□ -0.97
LINC00558-201ENST00000569422 MOCS2O96007 188 aaPredicted RBP8.97□□□□□ -0.97
LINC00558-201ENST00000569422 BPGMP07738 259 aa8.97□□□□□ -0.97
LINC00558-201ENST00000569422 ITGA2BP08514 1039 aa8.97□□□□□ -0.97
LINC00558-201ENST00000569422 KCNE1P15382 129 aa8.97□□□□□ -0.97
LINC00558-201ENST00000569422 FDFT1P37268 417 aa8.97□□□□□ -0.97
LINC00558-201ENST00000569422 MAGEA3P43357 314 aa8.97□□□□□ -0.97
LINC00558-201ENST00000569422 CACNB2Q08289 660 aaPredicted RBP8.97□□□□□ -0.97
LINC00558-201ENST00000569422 EML3Q32P44 896 aa8.97□□□□□ -0.97
LINC00558-201ENST00000569422 ZCCHC8Q6NZY4 707 aaKnown RBP8.97□□□□□ -0.97
LINC00558-201ENST00000569422 FAM35AQ86V20 835 aa8.97□□□□□ -0.97
LINC00558-201ENST00000569422 SLC25A41Q8N5S1 370 aa8.97□□□□□ -0.97
LINC00558-201ENST00000569422 SMC1BQ8NDV3 1235 aa8.97□□□□□ -0.97
LINC00558-201ENST00000569422 FAM161BQ96MY7 647 aa8.97□□□□□ -0.97
LINC00558-201ENST00000569422 ZNF570Q96NI8 536 aa8.97□□□□□ -0.97
LINC00558-201ENST00000569422 DNAI2Q9GZS0 605 aa8.97□□□□□ -0.97
LINC00558-201ENST00000569422 EBF2Q9HAK2 575 aa8.97□□□□□ -0.97
LINC00558-201ENST00000569422 RRAGCQ9HB90 399 aa8.97□□□□□ -0.97
LINC00558-201ENST00000569422 CHRAC1Q9NRG0 131 aa8.97□□□□□ -0.97
LINC00558-201ENST00000569422 FAM105AQ9NUU6 356 aa8.97□□□□□ -0.97
LINC00558-201ENST00000569422 MOCS1Q9NZB8 636 aa8.97□□□□□ -0.97
LINC00558-201ENST00000569422 PRR5-ARHGAP8B1AHC4 643 aa8.96□□□□□ -0.97
LINC00558-201ENST00000569422 SKAP2O75563 359 aaPredicted RBP8.96□□□□□ -0.97
LINC00558-201ENST00000569422 POLBP06746 335 aa8.96□□□□□ -0.97
LINC00558-201ENST00000569422 HOXD8P13378 290 aaPredicted RBP8.96□□□□□ -0.97
LINC00558-201ENST00000569422 AXLP30530 894 aa8.96□□□□□ -0.97
LINC00558-201ENST00000569422 PGM1P36871 562 aa8.96□□□□□ -0.97
LINC00558-201ENST00000569422 ARHGAP8P85298 464 aa8.96□□□□□ -0.97
LINC00558-201ENST00000569422 PARP6Q2NL67 630 aa8.96□□□□□ -0.97
LINC00558-201ENST00000569422 HSF5Q4G112 596 aaPredicted RBP8.96□□□□□ -0.97
LINC00558-201ENST00000569422 ARMC3Q5W041 872 aa8.96□□□□□ -0.97
LINC00558-201ENST00000569422 LRRC8BQ6P9F7 803 aa8.96□□□□□ -0.97
LINC00558-201ENST00000569422 STRA8Q7Z7C7 330 aa8.96□□□□□ -0.97
LINC00558-201ENST00000569422 C10orf107Q8IVU9 208 aa8.96□□□□□ -0.97
LINC00558-201ENST00000569422 ARL10Q8N8L6 244 aa8.96□□□□□ -0.97
LINC00558-201ENST00000569422 ZMIZ2Q8NF64 920 aa8.96□□□□□ -0.97
LINC00558-201ENST00000569422 SCAMP5Q8TAC9 235 aa8.96□□□□□ -0.97
LINC00558-201ENST00000569422 WDR60Q8WVS4 1066 aa8.96□□□□□ -0.97
LINC00558-201ENST00000569422 ATP2A3Q93084 1043 aa8.96□□□□□ -0.97
LINC00558-201ENST00000569422 SKA1Q96BD8 255 aa8.96□□□□□ -0.97
LINC00558-201ENST00000569422 VMP1Q96GC9 406 aa8.96□□□□□ -0.97
LINC00558-201ENST00000569422 TMEM209Q96SK2 561 aa8.96□□□□□ -0.97
LINC00558-201ENST00000569422 ATXN3LQ9H3M9 355 aa8.96□□□□□ -0.97
LINC00558-201ENST00000569422 RNPEPL1Q9HAU8 725 aa8.96□□□□□ -0.97
LINC00558-201ENST00000569422 PNPOQ9NVS9 261 aa8.96□□□□□ -0.97
LINC00558-201ENST00000569422 TMEM216Q9P0N5 145 aa8.96□□□□□ -0.97
LINC00558-201ENST00000569422 OR12D3Q9UGF7 316 aa8.96□□□□□ -0.97
LINC00558-201ENST00000569422 LOC100653049A0A140TA62 436 aa8.96□□□□□ -0.98
LINC00558-201ENST00000569422 TNPO2O14787 897 aaKnown RBP8.96□□□□□ -0.98
LINC00558-201ENST00000569422 OPHN1O60890 802 aa8.96□□□□□ -0.98
LINC00558-201ENST00000569422 KRT34O76011 436 aa8.96□□□□□ -0.98
LINC00558-201ENST00000569422 KRT36O76013 467 aa8.96□□□□□ -0.98
LINC00558-201ENST00000569422 LTFP02788 710 aa8.96□□□□□ -0.98
LINC00558-201ENST00000569422 PDHA1P08559 390 aa8.96□□□□□ -0.98
LINC00558-201ENST00000569422 NFKB1P19838 968 aa8.96□□□□□ -0.98
LINC00558-201ENST00000569422 WARSP23381 471 aaKnown RBP8.96□□□□□ -0.98
LINC00558-201ENST00000569422 PTPN3P26045 913 aa8.96□□□□□ -0.98
LINC00558-201ENST00000569422 CRHR1P34998 444 aa8.96□□□□□ -0.98
LINC00558-201ENST00000569422 AVPR1AP37288 418 aa8.96□□□□□ -0.98
LINC00558-201ENST00000569422 ZNF157P51786 506 aaPredicted RBP8.96□□□□□ -0.98
LINC00558-201ENST00000569422 DAOAP59103 153 aa8.96□□□□□ -0.98
LINC00558-201ENST00000569422 ZBTB17Q13105 803 aa8.96□□□□□ -0.98
LINC00558-201ENST00000569422 ITGA9Q13797 1035 aa8.96□□□□□ -0.98
LINC00558-201ENST00000569422 RCN1Q15293 331 aa8.96□□□□□ -0.98
LINC00558-201ENST00000569422 OTOP3Q7RTS5 596 aa8.96□□□□□ -0.98
LINC00558-201ENST00000569422 TOP6BLQ8N6T0 577 aa8.96□□□□□ -0.98
LINC00558-201ENST00000569422 SPATA22Q8NHS9 363 aa8.96□□□□□ -0.98
LINC00558-201ENST00000569422 MTBPQ96DY7 904 aa8.96□□□□□ -0.98
LINC00558-201ENST00000569422 ZNF778Q96MU6 729 aa8.96□□□□□ -0.98
LINC00558-201ENST00000569422 THTPAQ9BU02 230 aa8.96□□□□□ -0.98
LINC00558-201ENST00000569422 MAN1C1Q9NR34 630 aa8.96□□□□□ -0.98
LINC00558-201ENST00000569422 ARL5CA6NH57 179 aa8.96□□□□□ -0.98
LINC00558-201ENST00000569422 PGAM1P18669 254 aa8.96□□□□□ -0.98
LINC00558-201ENST00000569422 NCF2P19878 526 aaPredicted RBP8.96□□□□□ -0.98
LINC00558-201ENST00000569422 CALB2P22676 271 aa8.96□□□□□ -0.98
LINC00558-201ENST00000569422 MAGEA6P43360 314 aa8.96□□□□□ -0.98
LINC00558-201ENST00000569422 GLRBP48167 497 aa8.96□□□□□ -0.98
LINC00558-201ENST00000569422 SERPINB9P50453 376 aa8.96□□□□□ -0.98
LINC00558-201ENST00000569422 ADAM17P78536 824 aa8.96□□□□□ -0.98
LINC00558-201ENST00000569422 IRF9Q00978 393 aa8.96□□□□□ -0.98
LINC00558-201ENST00000569422 PEX6Q13608 980 aa8.96□□□□□ -0.98
LINC00558-201ENST00000569422 THOC5Q13769 683 aaKnown RBP8.96□□□□□ -0.98
LINC00558-201ENST00000569422 TIGD5Q53EQ6 642 aa8.96□□□□□ -0.98
LINC00558-201ENST00000569422 ARHGAP36Q6ZRI8 547 aa8.96□□□□□ -0.98
LINC00558-201ENST00000569422 RAPH1Q70E73 1250 aa8.96□□□□□ -0.98
LINC00558-201ENST00000569422 TEX9Q8N6V9 391 aa8.96□□□□□ -0.98
LINC00558-201ENST00000569422 EFCAB3Q8N7B9 438 aa8.96□□□□□ -0.98
LINC00558-201ENST00000569422 GSTCDQ8NEC7 633 aa8.96□□□□□ -0.98
LINC00558-201ENST00000569422 ACVR1CQ8NER5 493 aa8.96□□□□□ -0.98
LINC00558-201ENST00000569422 GIMAP1Q8WWP7 306 aa8.96□□□□□ -0.98
LINC00558-201ENST00000569422 PTCD3Q96EY7 689 aaKnown RBP8.96□□□□□ -0.98
LINC00558-201ENST00000569422 CERS2Q96G23 380 aa8.96□□□□□ -0.98
LINC00558-201ENST00000569422 SAR1AQ9NR31 198 aa8.96□□□□□ -0.98
LINC00558-201ENST00000569422 IARS2Q9NSE4 1012 aaKnown RBP8.96□□□□□ -0.98
LINC00558-201ENST00000569422 C20orf96Q9NUD7 363 aaPredicted RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms