RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 FDPSP14324 419 aaKnown RBP6.04□□□□□ -1.44
CDH13-211ENST00000568770 AMY2BP19961 511 aa6.04□□□□□ -1.44
CDH13-211ENST00000568770 TYMPP19971 482 aa6.04□□□□□ -1.44
CDH13-211ENST00000568770 DDX6P26196 483 aaKnown RBP eCLIP6.04□□□□□ -1.44
CDH13-211ENST00000568770 MCM7P33993 719 aa6.04□□□□□ -1.44
CDH13-211ENST00000568770 GUCY2FP51841 1108 aa6.04□□□□□ -1.44
CDH13-211ENST00000568770 LILRA4P59901 499 aa6.04□□□□□ -1.44
CDH13-211ENST00000568770 DMP1Q13316 513 aaPredicted RBP6.04□□□□□ -1.44
CDH13-211ENST00000568770 MTF1Q14872 753 aa6.04□□□□□ -1.44
CDH13-211ENST00000568770 NOLC1Q14978 699 aaKnown RBP eCLIP6.04□□□□□ -1.44
CDH13-211ENST00000568770 ZBTB6Q15916 424 aa6.04□□□□□ -1.44
CDH13-211ENST00000568770 TM4SF20Q53R12 229 aa6.04□□□□□ -1.44
CDH13-211ENST00000568770 OSTM1Q86WC4 334 aa6.04□□□□□ -1.44
CDH13-211ENST00000568770 ZC3H7AQ8IWR0 971 aaKnown RBP6.04□□□□□ -1.44
CDH13-211ENST00000568770 DAW1Q8N136 415 aa6.04□□□□□ -1.44
CDH13-211ENST00000568770 HDDC3Q8N4P3 179 aa6.04□□□□□ -1.44
CDH13-211ENST00000568770 CCDC33Q8N5R6 958 aa6.04□□□□□ -1.44
CDH13-211ENST00000568770 OLIG1Q8TAK6 271 aa6.04□□□□□ -1.44
CDH13-211ENST00000568770 SH3RF2Q8TEC5 729 aa6.04□□□□□ -1.44
CDH13-211ENST00000568770 WASF1Q92558 559 aa6.04□□□□□ -1.44
CDH13-211ENST00000568770 ATP2A3Q93084 1043 aa6.04□□□□□ -1.44
CDH13-211ENST00000568770 LRIG1Q96JA1 1093 aa6.04□□□□□ -1.44
CDH13-211ENST00000568770 SENP8Q96LD8 212 aa6.04□□□□□ -1.44
CDH13-211ENST00000568770 CNOT6LQ96LI5 555 aaKnown RBP6.04□□□□□ -1.44
CDH13-211ENST00000568770 YTHDC1Q96MU7 727 aaKnown RBP6.04□□□□□ -1.44
CDH13-211ENST00000568770 GTPBP2Q9BX10 602 aaKnown RBP6.04□□□□□ -1.44
CDH13-211ENST00000568770 SGPP1Q9BX95 441 aa6.04□□□□□ -1.44
CDH13-211ENST00000568770 EPB41L1Q9H4G0 881 aa6.04□□□□□ -1.44
CDH13-211ENST00000568770 KIF9Q9HAQ2 790 aa6.04□□□□□ -1.44
CDH13-211ENST00000568770 KMT5AQ9NQR1 393 aa6.04□□□□□ -1.44
CDH13-211ENST00000568770 DUS2Q9NX74 493 aaKnown RBP6.04□□□□□ -1.44
CDH13-211ENST00000568770 ARHGAP28Q9P2N2 729 aa6.04□□□□□ -1.44
CDH13-211ENST00000568770 ORC3Q9UBD5 711 aaPredicted RBP6.04□□□□□ -1.44
CDH13-211ENST00000568770 PILRBQ9UKJ0 227 aa6.04□□□□□ -1.44
CDH13-211ENST00000568770 COA3Q9Y2R0 106 aaPredicted RBP6.04□□□□□ -1.44
CDH13-211ENST00000568770 WNT6Q9Y6F9 365 aa6.04□□□□□ -1.44
CDH13-211ENST00000568770 A0A087X0B3 334 aa6.03□□□□□ -1.44
CDH13-211ENST00000568770 TTC26A0AVF1 554 aa6.03□□□□□ -1.44
CDH13-211ENST00000568770 CCDC66A2RUB6 948 aa6.03□□□□□ -1.44
CDH13-211ENST00000568770 EIF4E1BA6NMX2 242 aaKnown RBP6.03□□□□□ -1.44
CDH13-211ENST00000568770 LACTBL1A8MY62 500 aa6.03□□□□□ -1.44
CDH13-211ENST00000568770 SLC16A4O15374 487 aa6.03□□□□□ -1.44
CDH13-211ENST00000568770 CLDN3O15551 220 aa6.03□□□□□ -1.44
CDH13-211ENST00000568770 OPA1O60313 960 aa6.03□□□□□ -1.44
CDH13-211ENST00000568770 PFKFB2O60825 505 aa6.03□□□□□ -1.44
CDH13-211ENST00000568770 OPHN1O60890 802 aa6.03□□□□□ -1.44
CDH13-211ENST00000568770 LTFP02788 710 aa6.03□□□□□ -1.44
CDH13-211ENST00000568770 HNRNPLP14866 589 aaKnown RBP eCLIP6.03□□□□□ -1.44
CDH13-211ENST00000568770 HMGA1P17096 107 aaKnown RBP6.03□□□□□ -1.44
CDH13-211ENST00000568770 CYP3A5P20815 502 aa6.03□□□□□ -1.44
CDH13-211ENST00000568770 CCT6AP40227 531 aaKnown RBP6.03□□□□□ -1.44
CDH13-211ENST00000568770 P2RY2P41231 377 aa6.03□□□□□ -1.44
CDH13-211ENST00000568770 TNFSF9P41273 254 aa6.03□□□□□ -1.44
CDH13-211ENST00000568770 MATR3P43243 847 aaKnown RBP eCLIP6.03□□□□□ -1.44
CDH13-211ENST00000568770 MAPKAPK2P49137 400 aa6.03□□□□□ -1.44
CDH13-211ENST00000568770 ATXN3P54252 364 aaPredicted RBP6.03□□□□□ -1.44
CDH13-211ENST00000568770 SRSF3P84103 164 aaKnown RBP6.03□□□□□ -1.44
CDH13-211ENST00000568770 GFPT1Q06210 699 aaPredicted RBP6.03□□□□□ -1.44
CDH13-211ENST00000568770 STRN3Q13033 797 aa6.03□□□□□ -1.44
CDH13-211ENST00000568770 ZNF268Q14587 947 aaPredicted RBP6.03□□□□□ -1.44
CDH13-211ENST00000568770 NR1I3Q14994 352 aa6.03□□□□□ -1.44
CDH13-211ENST00000568770 ZNF77Q15935 545 aa6.03□□□□□ -1.44
CDH13-211ENST00000568770 CRY1Q16526 586 aa6.03□□□□□ -1.44
CDH13-211ENST00000568770 LYSMD4Q5XG99 296 aa6.03□□□□□ -1.44
CDH13-211ENST00000568770 STEAP3Q658P3 488 aa6.03□□□□□ -1.44
CDH13-211ENST00000568770 HAUS3Q68CZ6 603 aa6.03□□□□□ -1.44
CDH13-211ENST00000568770 CNNM4Q6P4Q7 775 aa6.03□□□□□ -1.44
CDH13-211ENST00000568770 LRRTM3Q86VH5 581 aa6.03□□□□□ -1.44
CDH13-211ENST00000568770 MON1AQ86VX9 555 aa6.03□□□□□ -1.44
CDH13-211ENST00000568770 EFCAB13Q8IY85 973 aa6.03□□□□□ -1.44
CDH13-211ENST00000568770 DIS3L2Q8IYB7 885 aaKnown RBP6.03□□□□□ -1.44
CDH13-211ENST00000568770 PNPLA1Q8N8W4 532 aa6.03□□□□□ -1.44
CDH13-211ENST00000568770 IGSF22Q8N9C0 903 aa6.03□□□□□ -1.44
CDH13-211ENST00000568770 STKLD1Q8NE28 680 aa6.03□□□□□ -1.44
CDH13-211ENST00000568770 OR2I1PQ8NGU4 316 aa6.03□□□□□ -1.44
CDH13-211ENST00000568770 CCDC26Q8TAB7 109 aa6.03□□□□□ -1.44
CDH13-211ENST00000568770 MDM1Q8TC05 714 aa6.03□□□□□ -1.44
CDH13-211ENST00000568770 OSCP1Q8WVF1 389 aa6.03□□□□□ -1.44
CDH13-211ENST00000568770 MRPS31Q92665 395 aaKnown RBP6.03□□□□□ -1.44
CDH13-211ENST00000568770 FBXW5Q969U6 566 aa6.03□□□□□ -1.44
CDH13-211ENST00000568770 CAMK1GQ96NX5 476 aa6.03□□□□□ -1.44
CDH13-211ENST00000568770 SLC22A12Q96S37 553 aa6.03□□□□□ -1.44
CDH13-211ENST00000568770 CYP2S1Q96SQ9 504 aa6.03□□□□□ -1.44
CDH13-211ENST00000568770 HAPLN2Q9GZV7 340 aa6.03□□□□□ -1.44
CDH13-211ENST00000568770 ZCWPW1Q9H0M4 648 aa6.03□□□□□ -1.44
CDH13-211ENST00000568770 LINC00597Q9H2U6 94 aa6.03□□□□□ -1.44
CDH13-211ENST00000568770 PLEKHA5Q9HAU0 1116 aa6.03□□□□□ -1.44
CDH13-211ENST00000568770 TRPC7Q9HCX4 862 aa6.03□□□□□ -1.44
CDH13-211ENST00000568770 SLC6A20Q9NP91 592 aa6.03□□□□□ -1.44
CDH13-211ENST00000568770 PDRG1Q9NUG6 133 aa6.03□□□□□ -1.44
CDH13-211ENST00000568770 DDX19AQ9NUU7 478 aaKnown RBP6.03□□□□□ -1.44
CDH13-211ENST00000568770 MMP17Q9ULZ9 603 aa6.03□□□□□ -1.44
CDH13-211ENST00000568770 UBQLN1Q9UMX0 589 aaKnown RBP6.03□□□□□ -1.44
CDH13-211ENST00000568770 MAGED2Q9UNF1 606 aaPredicted RBP6.03□□□□□ -1.44
CDH13-211ENST00000568770 MYLKQ15746 1914 aa6.03□□□□□ -1.44
CDH13-211ENST00000568770 MUC22E2RYF6 1773 aaPredicted RBP6.03□□□□□ -1.44
CDH13-211ENST00000568770 MYO18BQ8IUG5 2567 aa6.03□□□□□ -1.44
CDH13-211ENST00000568770 E9PMD0 336 aa6.02□□□□□ -1.45
CDH13-211ENST00000568770 KCNK3O14649 394 aa6.02□□□□□ -1.45
CDH13-211ENST00000568770 XPOTO43592 962 aaKnown RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms