RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 TBC1D3EA0A087X179 549 aa16.27■□□□□ 0.2
HERPUD1-215ENST00000568676 TBC1D3KA0A087X1G2 549 aa16.27■□□□□ 0.2
HERPUD1-215ENST00000568676 TEX51A0A1B0GUA7 166 aa16.27■□□□□ 0.2
HERPUD1-215ENST00000568676 TBC1D3FA6NER0 549 aaPredicted RBP16.27■□□□□ 0.2
HERPUD1-215ENST00000568676 TBC1D3LB9A6J9 549 aa16.27■□□□□ 0.2
HERPUD1-215ENST00000568676 CAPN9O14815 690 aa16.27■□□□□ 0.2
HERPUD1-215ENST00000568676 GABBR2O75899 941 aa16.27■□□□□ 0.2
HERPUD1-215ENST00000568676 IL1BP01584 269 aa16.27■□□□□ 0.2
HERPUD1-215ENST00000568676 TBC1D3HP0C7X1 549 aa16.27■□□□□ 0.2
HERPUD1-215ENST00000568676 ACP1P24666 158 aa16.27■□□□□ 0.2
HERPUD1-215ENST00000568676 MZF1P28698 734 aaPredicted RBP16.27■□□□□ 0.2
HERPUD1-215ENST00000568676 ACTN2P35609 894 aa16.27■□□□□ 0.2
HERPUD1-215ENST00000568676 PRCPP42785 496 aa16.27■□□□□ 0.2
HERPUD1-215ENST00000568676 ACADSBP45954 432 aa16.27■□□□□ 0.2
HERPUD1-215ENST00000568676 RPL34P49207 117 aaKnown RBP16.27■□□□□ 0.2
HERPUD1-215ENST00000568676 E2F1Q01094 437 aa16.27■□□□□ 0.2
HERPUD1-215ENST00000568676 MEA1Q16626 185 aa16.27■□□□□ 0.2
HERPUD1-215ENST00000568676 DCAF6Q58WW2 860 aa16.27■□□□□ 0.2
HERPUD1-215ENST00000568676 FSCBQ5H9T9 825 aa16.27■□□□□ 0.2
HERPUD1-215ENST00000568676 ZNF658Q5TYW1 1059 aaPredicted RBP16.27■□□□□ 0.2
HERPUD1-215ENST00000568676 TTC39BQ5VTQ0 682 aaPredicted RBP16.27■□□□□ 0.2
HERPUD1-215ENST00000568676 FAM46CQ5VWP2 391 aa16.27■□□□□ 0.2
HERPUD1-215ENST00000568676 TBC1D3GQ6DHY5 549 aa16.27■□□□□ 0.2
HERPUD1-215ENST00000568676 TBC1D3CQ6IPX1 549 aa16.27■□□□□ 0.2
HERPUD1-215ENST00000568676 TBC1D3Q8IZP1 549 aaPredicted RBP16.27■□□□□ 0.2
HERPUD1-215ENST00000568676 BTN2A3PQ96KV6 586 aa16.27■□□□□ 0.2
HERPUD1-215ENST00000568676 GSDMAQ96QA5 445 aa16.27■□□□□ 0.2
HERPUD1-215ENST00000568676 NUCKS1Q9H1E3 243 aaKnown RBP16.27■□□□□ 0.2
HERPUD1-215ENST00000568676 SLCO3A1Q9UIG8 710 aa16.27■□□□□ 0.2
HERPUD1-215ENST00000568676 PCDHB4Q9Y5E5 795 aa16.27■□□□□ 0.2
HERPUD1-215ENST00000568676 KNTC1P50748 2209 aa16.27■□□□□ 0.19
HERPUD1-215ENST00000568676 TP53BP1Q12888 1972 aaPredicted RBP16.27■□□□□ 0.19
HERPUD1-215ENST00000568676 P4HA2O15460 535 aa16.26■□□□□ 0.19
HERPUD1-215ENST00000568676 TLX3O43711 291 aaPredicted RBP16.26■□□□□ 0.19
HERPUD1-215ENST00000568676 RNGTTO60942 597 aaKnown RBP16.26■□□□□ 0.19
HERPUD1-215ENST00000568676 FYNP06241 537 aa16.26■□□□□ 0.19
HERPUD1-215ENST00000568676 ITPKBP27987 946 aa16.26■□□□□ 0.19
HERPUD1-215ENST00000568676 FMO5P49326 533 aa16.26■□□□□ 0.19
HERPUD1-215ENST00000568676 PLK1P53350 603 aa16.26■□□□□ 0.19
HERPUD1-215ENST00000568676 LRMPQ12912 555 aa16.26■□□□□ 0.19
HERPUD1-215ENST00000568676 MTA1Q13330 715 aa16.26■□□□□ 0.19
HERPUD1-215ENST00000568676 HS1BP3Q53T59 392 aa16.26■□□□□ 0.19
HERPUD1-215ENST00000568676 KANSL1Q7Z3B3 1105 aa16.26■□□□□ 0.19
HERPUD1-215ENST00000568676 TRIM69Q86WT6 500 aa16.26■□□□□ 0.19
HERPUD1-215ENST00000568676 SMYD4Q8IYR2 804 aaPredicted RBP16.26■□□□□ 0.19
HERPUD1-215ENST00000568676 STK40Q8N2I9 435 aa16.26■□□□□ 0.19
HERPUD1-215ENST00000568676 CLEC4CQ8WTT0 213 aa16.26■□□□□ 0.19
HERPUD1-215ENST00000568676 STK32AQ8WU08 396 aa16.26■□□□□ 0.19
HERPUD1-215ENST00000568676 FAM149B1Q96BN6 582 aa16.26■□□□□ 0.19
HERPUD1-215ENST00000568676 FCRL3Q96P31 734 aaPredicted RBP16.26■□□□□ 0.19
HERPUD1-215ENST00000568676 MIS12Q9H081 205 aa16.26■□□□□ 0.19
HERPUD1-215ENST00000568676 SLC12A6Q9UHW9 1150 aa16.26■□□□□ 0.19
HERPUD1-215ENST00000568676 CLCA2Q9UQC9 943 aa16.26■□□□□ 0.19
HERPUD1-215ENST00000568676 F5H5T6 163 aa16.25■□□□□ 0.19
HERPUD1-215ENST00000568676 CBX4O00257 560 aa16.25■□□□□ 0.19
HERPUD1-215ENST00000568676 PIK3R2O00459 728 aa16.25■□□□□ 0.19
HERPUD1-215ENST00000568676 WNT9AO14904 365 aa16.25■□□□□ 0.19
HERPUD1-215ENST00000568676 ALOX15BO15296 676 aa16.25■□□□□ 0.19
HERPUD1-215ENST00000568676 PLRG1O43660 514 aaKnown RBP16.25■□□□□ 0.19
HERPUD1-215ENST00000568676 SLC2A3P11169 496 aa16.25■□□□□ 0.19
HERPUD1-215ENST00000568676 TACR2P21452 398 aa16.25■□□□□ 0.19
HERPUD1-215ENST00000568676 GLDCP23378 1020 aa16.25■□□□□ 0.19
HERPUD1-215ENST00000568676 DRD3P35462 400 aa16.25■□□□□ 0.19
HERPUD1-215ENST00000568676 CTSOP43234 321 aaPredicted RBP16.25■□□□□ 0.19
HERPUD1-215ENST00000568676 GCNT1Q02742 428 aa16.25■□□□□ 0.19
HERPUD1-215ENST00000568676 STAT4Q14765 748 aa16.25■□□□□ 0.19
HERPUD1-215ENST00000568676 SETMARQ53H47 684 aaPredicted RBP16.25■□□□□ 0.19
HERPUD1-215ENST00000568676 MMS22LQ6ZRQ5 1243 aa16.25■□□□□ 0.19
HERPUD1-215ENST00000568676 GPR155Q7Z3F1 870 aa16.25■□□□□ 0.19
HERPUD1-215ENST00000568676 CHSY1Q86X52 802 aa16.25■□□□□ 0.19
HERPUD1-215ENST00000568676 LGI2Q8N0V4 545 aa16.25■□□□□ 0.19
HERPUD1-215ENST00000568676 CFAP52Q8N1V2 620 aa16.25■□□□□ 0.19
HERPUD1-215ENST00000568676 PPM1KQ8N3J5 372 aa16.25■□□□□ 0.19
HERPUD1-215ENST00000568676 ATP6V0D2Q8N8Y2 350 aa16.25■□□□□ 0.19
HERPUD1-215ENST00000568676 DCBLD1Q8N8Z6 715 aa16.25■□□□□ 0.19
HERPUD1-215ENST00000568676 OR8D1Q8WZ84 308 aa16.25■□□□□ 0.19
HERPUD1-215ENST00000568676 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.25■□□□□ 0.19
HERPUD1-215ENST00000568676 ARHGAP20Q9P2F6 1191 aa16.25■□□□□ 0.19
HERPUD1-215ENST00000568676 CYTH4Q9UIA0 394 aa16.25■□□□□ 0.19
HERPUD1-215ENST00000568676 A0A1B0GVM2 712 aa16.24■□□□□ 0.19
HERPUD1-215ENST00000568676 TCAF2A6NFQ2 919 aa16.24■□□□□ 0.19
HERPUD1-215ENST00000568676 C1QTNF3-AMACRE9PGA6 284 aa16.24■□□□□ 0.19
HERPUD1-215ENST00000568676 PRAMEF26H0Y7S4 382 aa16.24■□□□□ 0.19
HERPUD1-215ENST00000568676 MOCS2O96007 188 aaPredicted RBP16.24■□□□□ 0.19
HERPUD1-215ENST00000568676 BRD2P25440 801 aaKnown RBP16.24■□□□□ 0.19
HERPUD1-215ENST00000568676 PPP1R2P41236 205 aa16.24■□□□□ 0.19
HERPUD1-215ENST00000568676 GPD2P43304 727 aa16.24■□□□□ 0.19
HERPUD1-215ENST00000568676 CCDC15Q0P6D6 951 aa16.24■□□□□ 0.19
HERPUD1-215ENST00000568676 BNIP3Q12983 259 aa16.24■□□□□ 0.19
HERPUD1-215ENST00000568676 ZNF211Q13398 564 aaPredicted RBP16.24■□□□□ 0.19
HERPUD1-215ENST00000568676 PROX2Q3B8N5 592 aa16.24■□□□□ 0.19
HERPUD1-215ENST00000568676 TBC1D25Q3MII6 688 aa16.24■□□□□ 0.19
HERPUD1-215ENST00000568676 RABGAP1LQ5R372 815 aa16.24■□□□□ 0.19
HERPUD1-215ENST00000568676 ANKRD40Q6AI12 368 aa16.24■□□□□ 0.19
HERPUD1-215ENST00000568676 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.24■□□□□ 0.19
HERPUD1-215ENST00000568676 TAC4Q86UU9 113 aa16.24■□□□□ 0.19
HERPUD1-215ENST00000568676 SPATS2Q86XZ4 545 aaKnown RBP16.24■□□□□ 0.19
HERPUD1-215ENST00000568676 APCDD1Q8J025 514 aa16.24■□□□□ 0.19
HERPUD1-215ENST00000568676 ERCC4Q92889 916 aaPredicted RBP16.24■□□□□ 0.19
HERPUD1-215ENST00000568676 MYEOVQ96EZ4 313 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms