RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 ANAPC7Q9UJX3 599 aa12.77□□□□□ -0.37
RNF40-211ENST00000567365 REXO2Q9Y3B8 237 aaKnown RBP12.77□□□□□ -0.37
RNF40-211ENST00000567365 EPN1Q9Y6I3 576 aaPredicted RBP12.77□□□□□ -0.37
RNF40-211ENST00000567365 STON1Q9Y6Q2 735 aa12.77□□□□□ -0.37
RNF40-211ENST00000567365 ZFHX2Q9C0A1 2572 aaPredicted RBP12.76□□□□□ -0.37
RNF40-211ENST00000567365 ZNF292O60281 2723 aa12.76□□□□□ -0.37
RNF40-211ENST00000567365 PLXND1Q9Y4D7 1925 aa12.76□□□□□ -0.37
RNF40-211ENST00000567365 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.76□□□□□ -0.37
RNF40-211ENST00000567365 SOWAHDA6NJG2 315 aa12.76□□□□□ -0.37
RNF40-211ENST00000567365 WASH4PA8MWX3 477 aa12.76□□□□□ -0.37
RNF40-211ENST00000567365 EIF3CLB5ME19 914 aaKnown RBP12.76□□□□□ -0.37
RNF40-211ENST00000567365 H0Y626 953 aa12.76□□□□□ -0.37
RNF40-211ENST00000567365 MYO1FO00160 1098 aa12.76□□□□□ -0.37
RNF40-211ENST00000567365 SRGAP2O75044 1071 aa12.76□□□□□ -0.37
RNF40-211ENST00000567365 RNF8O76064 485 aa12.76□□□□□ -0.37
RNF40-211ENST00000567365 PROSCO94903 275 aa12.76□□□□□ -0.37
RNF40-211ENST00000567365 APBB3O95704 486 aa12.76□□□□□ -0.37
RNF40-211ENST00000567365 RHOQP17081 205 aa12.76□□□□□ -0.37
RNF40-211ENST00000567365 PRKCHP24723 683 aa12.76□□□□□ -0.37
RNF40-211ENST00000567365 DGKEP52429 567 aa12.76□□□□□ -0.37
RNF40-211ENST00000567365 HADHBP55084 474 aaKnown RBP12.76□□□□□ -0.37
RNF40-211ENST00000567365 OXCT1P55809 520 aa12.76□□□□□ -0.37
RNF40-211ENST00000567365 ZNF177Q13360 481 aaPredicted RBP12.76□□□□□ -0.37
RNF40-211ENST00000567365 EFHC2Q5JST6 749 aa12.76□□□□□ -0.37
RNF40-211ENST00000567365 ERMARDQ5T6L9 678 aa12.76□□□□□ -0.37
RNF40-211ENST00000567365 TXNRD3NBQ6F5E7 133 aa12.76□□□□□ -0.37
RNF40-211ENST00000567365 KIAA1211LQ6NV74 962 aa12.76□□□□□ -0.37
RNF40-211ENST00000567365 SCYL2Q6P3W7 929 aa12.76□□□□□ -0.37
RNF40-211ENST00000567365 WDR5BQ86VZ2 330 aa12.76□□□□□ -0.37
RNF40-211ENST00000567365 CHPFQ8IZ52 775 aa12.76□□□□□ -0.37
RNF40-211ENST00000567365 FAM71BQ8TC56 605 aa12.76□□□□□ -0.37
RNF40-211ENST00000567365 CYB5D2Q8WUJ1 264 aa12.76□□□□□ -0.37
RNF40-211ENST00000567365 UCMAQ8WVF2 138 aa12.76□□□□□ -0.37
RNF40-211ENST00000567365 RFFLQ8WZ73 363 aa12.76□□□□□ -0.37
RNF40-211ENST00000567365 HHIPQ96QV1 700 aa12.76□□□□□ -0.37
RNF40-211ENST00000567365 EIF3CQ99613 913 aaKnown RBP12.76□□□□□ -0.37
RNF40-211ENST00000567365 CIPCQ9C0C6 399 aa12.76□□□□□ -0.37
RNF40-211ENST00000567365 NOL6Q9H6R4 1146 aaKnown RBP12.76□□□□□ -0.37
RNF40-211ENST00000567365 TMEM248Q9NWD8 314 aa12.76□□□□□ -0.37
RNF40-211ENST00000567365 GPATCH2LQ9NWQ4 482 aa12.76□□□□□ -0.37
RNF40-211ENST00000567365 ZSCAN32Q9NX65 697 aa12.76□□□□□ -0.37
RNF40-211ENST00000567365 USP18Q9UMW8 372 aa12.76□□□□□ -0.37
RNF40-211ENST00000567365 A0A0D9SEW6 157 aa12.75□□□□□ -0.37
RNF40-211ENST00000567365 ILVBLA1L0T0 632 aa12.75□□□□□ -0.37
RNF40-211ENST00000567365 RCCD1A6NED2 376 aa12.75□□□□□ -0.37
RNF40-211ENST00000567365 PRR23AA6NEV1 266 aa12.75□□□□□ -0.37
RNF40-211ENST00000567365 ZMPSTE24O75844 475 aa12.75□□□□□ -0.37
RNF40-211ENST00000567365 NDUFA10O95299 355 aa12.75□□□□□ -0.37
RNF40-211ENST00000567365 ASLP04424 464 aa12.75□□□□□ -0.37
RNF40-211ENST00000567365 HOXB2P14652 356 aa12.75□□□□□ -0.37
RNF40-211ENST00000567365 POLR2EP19388 210 aaKnown RBP12.75□□□□□ -0.37
RNF40-211ENST00000567365 MAN1A1P33908 653 aa12.75□□□□□ -0.37
RNF40-211ENST00000567365 HTR7P34969 479 aa12.75□□□□□ -0.37
RNF40-211ENST00000567365 WASP42768 502 aa12.75□□□□□ -0.37
RNF40-211ENST00000567365 CTSOP43234 321 aaPredicted RBP12.75□□□□□ -0.37
RNF40-211ENST00000567365 CAMK2GQ13555 558 aaPredicted RBP12.75□□□□□ -0.37
RNF40-211ENST00000567365 E2F5Q15329 346 aa12.75□□□□□ -0.37
RNF40-211ENST00000567365 DPYSL2Q16555 572 aa12.75□□□□□ -0.37
RNF40-211ENST00000567365 RIF1Q5UIP0 2472 aaKnown RBP12.75□□□□□ -0.37
RNF40-211ENST00000567365 ZNF783Q6ZMS7 281 aa12.75□□□□□ -0.37
RNF40-211ENST00000567365 TFAP2DQ7Z6R9 452 aa12.75□□□□□ -0.37
RNF40-211ENST00000567365 LONP2Q86WA8 852 aa12.75□□□□□ -0.37
RNF40-211ENST00000567365 SPC24Q8NBT2 197 aa12.75□□□□□ -0.37
RNF40-211ENST00000567365 SLC35G2Q8TBE7 412 aa12.75□□□□□ -0.37
RNF40-211ENST00000567365 TEKT4Q8WW24 435 aa12.75□□□□□ -0.37
RNF40-211ENST00000567365 TBC1D31Q96DN5 1066 aa12.75□□□□□ -0.37
RNF40-211ENST00000567365 CFAP54Q96N23 3096 aa12.75□□□□□ -0.37
RNF40-211ENST00000567365 KCTD15Q96SI1 283 aaPredicted RBP12.75□□□□□ -0.37
RNF40-211ENST00000567365 CTTNBP2NLQ9P2B4 639 aa12.75□□□□□ -0.37
RNF40-211ENST00000567365 PCSK1NQ9UHG2 260 aa12.75□□□□□ -0.37
RNF40-211ENST00000567365 AP4E1Q9UPM8 1137 aa12.75□□□□□ -0.37
RNF40-211ENST00000567365 SLC8A2Q9UPR5 921 aa12.75□□□□□ -0.37
RNF40-211ENST00000567365 PCDHGA2Q9Y5H1 932 aa12.75□□□□□ -0.37
RNF40-211ENST00000567365 NYNRINQ9P2P1 1898 aaKnown RBP12.74□□□□□ -0.37
RNF40-211ENST00000567365 PRPSAP2O60256 369 aa12.74□□□□□ -0.37
RNF40-211ENST00000567365 ATP5BP06576 529 aaKnown RBP12.74□□□□□ -0.37
RNF40-211ENST00000567365 SRPRAP08240 638 aaKnown RBP12.74□□□□□ -0.37
RNF40-211ENST00000567365 RARAP10276 462 aa12.74□□□□□ -0.37
RNF40-211ENST00000567365 GABRG2P18507 467 aa12.74□□□□□ -0.37
RNF40-211ENST00000567365 CYLC1P35663 651 aaPredicted RBP12.74□□□□□ -0.37
RNF40-211ENST00000567365 MAGEA1P43355 309 aa12.74□□□□□ -0.37
RNF40-211ENST00000567365 HCAR3P49019 387 aa12.74□□□□□ -0.37
RNF40-211ENST00000567365 PXNP49023 591 aaPredicted RBP12.74□□□□□ -0.37
RNF40-211ENST00000567365 MAPKAPK2P49137 400 aa12.74□□□□□ -0.37
RNF40-211ENST00000567365 FNTBP49356 437 aa12.74□□□□□ -0.37
RNF40-211ENST00000567365 ARSEP51690 589 aa12.74□□□□□ -0.37
RNF40-211ENST00000567365 COPAP53621 1224 aa12.74□□□□□ -0.37
RNF40-211ENST00000567365 NRLP54845 237 aa12.74□□□□□ -0.37
RNF40-211ENST00000567365 TAS2R40P59535 323 aa12.74□□□□□ -0.37
RNF40-211ENST00000567365 ECT2LQ008S8 904 aa12.74□□□□□ -0.37
RNF40-211ENST00000567365 BOLA3Q53S33 107 aa12.74□□□□□ -0.37
RNF40-211ENST00000567365 RTL3Q8N8U3 475 aaKnown RBP12.74□□□□□ -0.37
RNF40-211ENST00000567365 MDGA1Q8NFP4 955 aa12.74□□□□□ -0.37
RNF40-211ENST00000567365 TSC1Q92574 1164 aa12.74□□□□□ -0.37
RNF40-211ENST00000567365 EPAS1Q99814 870 aa12.74□□□□□ -0.37
RNF40-211ENST00000567365 BAG1Q99933 345 aaPredicted RBP12.74□□□□□ -0.37
RNF40-211ENST00000567365 ACE2Q9BYF1 805 aaPredicted RBP12.74□□□□□ -0.37
RNF40-211ENST00000567365 KLC2Q9H0B6 622 aa12.74□□□□□ -0.37
RNF40-211ENST00000567365 GRPEL1Q9HAV7 217 aa12.74□□□□□ -0.37
RNF40-211ENST00000567365 ERVW-1Q9UQF0 538 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms