RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 HACD1B0YJ81 288 aa16.02■□□□□ 0.15
COMMD4-215ENST00000566843 PIK3R2O00459 728 aa16.02■□□□□ 0.15
COMMD4-215ENST00000566843 PSMC3P17980 439 aa16.02■□□□□ 0.15
COMMD4-215ENST00000566843 ATICP31939 592 aa16.02■□□□□ 0.15
COMMD4-215ENST00000566843 DPP6P42658 865 aa16.02■□□□□ 0.15
COMMD4-215ENST00000566843 DPYSQ14117 519 aa16.02■□□□□ 0.15
COMMD4-215ENST00000566843 LSM12Q3MHD2 195 aaKnown RBP16.02■□□□□ 0.15
COMMD4-215ENST00000566843 MGAT5BQ3V5L5 792 aa16.02■□□□□ 0.15
COMMD4-215ENST00000566843 MAP1SQ66K74 1059 aaPredicted RBP16.02■□□□□ 0.15
COMMD4-215ENST00000566843 SNRNP48Q6IEG0 339 aaKnown RBP16.02■□□□□ 0.15
COMMD4-215ENST00000566843 ZBTB8OSQ8IWT0 167 aa16.02■□□□□ 0.15
COMMD4-215ENST00000566843 TSPAN14Q8NG11 270 aa16.02■□□□□ 0.15
COMMD4-215ENST00000566843 CEP70Q8NHQ1 597 aa16.02■□□□□ 0.15
COMMD4-215ENST00000566843 FNDC8Q8TC99 324 aa16.02■□□□□ 0.15
COMMD4-215ENST00000566843 HTR3CQ8WXA8 447 aa16.02■□□□□ 0.15
COMMD4-215ENST00000566843 ZNF597Q96LX8 424 aa16.02■□□□□ 0.15
COMMD4-215ENST00000566843 KLHL32Q96NJ5 620 aa16.02■□□□□ 0.15
COMMD4-215ENST00000566843 ILKAPQ9H0C8 392 aaPredicted RBP16.02■□□□□ 0.15
COMMD4-215ENST00000566843 RNF181Q9P0P0 153 aa16.02■□□□□ 0.15
COMMD4-215ENST00000566843 HESX1Q9UBX0 185 aa16.02■□□□□ 0.15
COMMD4-215ENST00000566843 ZNHIT2Q9UHR6 403 aa16.02■□□□□ 0.15
COMMD4-215ENST00000566843 RAP2CQ9Y3L5 183 aa16.02■□□□□ 0.15
COMMD4-215ENST00000566843 RLFQ13129 1914 aa16.02■□□□□ 0.15
COMMD4-215ENST00000566843 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.01■□□□□ 0.15
COMMD4-215ENST00000566843 TADA2AO75478 443 aa16.01■□□□□ 0.15
COMMD4-215ENST00000566843 RNASEH2AO75792 299 aaKnown RBP16.01■□□□□ 0.15
COMMD4-215ENST00000566843 MPOP05164 745 aa16.01■□□□□ 0.15
COMMD4-215ENST00000566843 RPS12P25398 132 aaKnown RBP16.01■□□□□ 0.15
COMMD4-215ENST00000566843 TPP2P29144 1249 aaPredicted RBP16.01■□□□□ 0.15
COMMD4-215ENST00000566843 SDC4P31431 198 aa16.01■□□□□ 0.15
COMMD4-215ENST00000566843 PPARGP37231 505 aaPredicted RBP16.01■□□□□ 0.15
COMMD4-215ENST00000566843 PKNOX1P55347 436 aa16.01■□□□□ 0.15
COMMD4-215ENST00000566843 SESN2P58004 480 aaPredicted RBP16.01■□□□□ 0.15
COMMD4-215ENST00000566843 LAMTOR4Q0VGL1 99 aa16.01■□□□□ 0.15
COMMD4-215ENST00000566843 PPP2R5DQ14738 602 aa16.01■□□□□ 0.15
COMMD4-215ENST00000566843 PPP6R3Q5H9R7 873 aaPredicted RBP16.01■□□□□ 0.15
COMMD4-215ENST00000566843 SPANXN3Q5MJ09 141 aa16.01■□□□□ 0.15
COMMD4-215ENST00000566843 KLHL35Q6PF15 583 aa16.01■□□□□ 0.15
COMMD4-215ENST00000566843 CMC1Q7Z7K0 106 aa16.01■□□□□ 0.15
COMMD4-215ENST00000566843 CROCCP3Q8IVE0 287 aa16.01■□□□□ 0.15
COMMD4-215ENST00000566843 TNS4Q8IZW8 715 aa16.01■□□□□ 0.15
COMMD4-215ENST00000566843 BBS5Q8N3I7 341 aa16.01■□□□□ 0.15
COMMD4-215ENST00000566843 SREK1Q8WXA9 508 aaKnown RBP16.01■□□□□ 0.15
COMMD4-215ENST00000566843 RBBP8Q99708 897 aa16.01■□□□□ 0.15
COMMD4-215ENST00000566843 GATA5Q9BWX5 397 aaPredicted RBP16.01■□□□□ 0.15
COMMD4-215ENST00000566843 WDR41Q9HAD4 459 aa16.01■□□□□ 0.15
COMMD4-215ENST00000566843 KIAA1257Q9ULG3 409 aa16.01■□□□□ 0.15
COMMD4-215ENST00000566843 SQORQ9Y6N5 450 aa16.01■□□□□ 0.15
COMMD4-215ENST00000566843 SPDYE16A6NNV3 312 aaPredicted RBP16.01■□□□□ 0.15
COMMD4-215ENST00000566843 HDAC3O15379 428 aa16.01■□□□□ 0.15
COMMD4-215ENST00000566843 LIMK2P53671 638 aa16.01■□□□□ 0.15
COMMD4-215ENST00000566843 INCA1Q0VD86 236 aa16.01■□□□□ 0.15
COMMD4-215ENST00000566843 AFG1LQ8WV93 481 aa16.01■□□□□ 0.15
COMMD4-215ENST00000566843 CERS2Q96G23 380 aa16.01■□□□□ 0.15
COMMD4-215ENST00000566843 ZBED3Q96IU2 234 aaPredicted RBP16.01■□□□□ 0.15
COMMD4-215ENST00000566843 SLC4A5Q9BY07 1137 aa16.01■□□□□ 0.15
COMMD4-215ENST00000566843 WDR55Q9H6Y2 383 aaPredicted RBP16.01■□□□□ 0.15
COMMD4-215ENST00000566843 SYBUQ9NX95 663 aa16.01■□□□□ 0.15
COMMD4-215ENST00000566843 DTLQ9NZJ0 730 aa16.01■□□□□ 0.15
COMMD4-215ENST00000566843 TXNDC16Q9P2K2 825 aa16.01■□□□□ 0.15
COMMD4-215ENST00000566843 TSPAN16Q9UKR8 245 aa16.01■□□□□ 0.15
COMMD4-215ENST00000566843 LCTP09848 1927 aa16■□□□□ 0.15
COMMD4-215ENST00000566843 GOLGA8QA0A0J9YX86 632 aa16■□□□□ 0.15
COMMD4-215ENST00000566843 A0A1B0GTW7 788 aa16■□□□□ 0.15
COMMD4-215ENST00000566843 C7orf72A4D263 438 aa16■□□□□ 0.15
COMMD4-215ENST00000566843 GOLGA8OA6NCC3 632 aa16■□□□□ 0.15
COMMD4-215ENST00000566843 GOLGA8NF8WBI6 632 aa16■□□□□ 0.15
COMMD4-215ENST00000566843 NFICP08651 508 aa16■□□□□ 0.15
COMMD4-215ENST00000566843 ERVK-10P10266 1014 aa16■□□□□ 0.15
COMMD4-215ENST00000566843 EPHA3P29320 983 aa16■□□□□ 0.15
COMMD4-215ENST00000566843 SPRP35270 261 aaPredicted RBP16■□□□□ 0.15
COMMD4-215ENST00000566843 ZNF280AP59817 542 aaPredicted RBP16■□□□□ 0.15
COMMD4-215ENST00000566843 SLC6A3Q01959 620 aa16■□□□□ 0.15
COMMD4-215ENST00000566843 ATF7IP2Q5U623 682 aa16■□□□□ 0.15
COMMD4-215ENST00000566843 POTEHQ6S545 545 aa16■□□□□ 0.15
COMMD4-215ENST00000566843 CARM1Q86X55 608 aa16■□□□□ 0.15
COMMD4-215ENST00000566843 TMEM130Q8N3G9 435 aa16■□□□□ 0.15
COMMD4-215ENST00000566843 CNTD1Q8N815 330 aa16■□□□□ 0.15
COMMD4-215ENST00000566843 COLGALT1Q8NBJ5 622 aa16■□□□□ 0.15
COMMD4-215ENST00000566843 PGBD4Q96DM1 585 aa16■□□□□ 0.15
COMMD4-215ENST00000566843 CCT7Q99832 543 aa16■□□□□ 0.15
COMMD4-215ENST00000566843 MAF1Q9H063 256 aa16■□□□□ 0.15
COMMD4-215ENST00000566843 C2orf40Q9H1Z8 148 aa16■□□□□ 0.15
COMMD4-215ENST00000566843 RPF1Q9H9Y2 349 aaKnown RBP16■□□□□ 0.15
COMMD4-215ENST00000566843 OXSMQ9NWU1 459 aa16■□□□□ 0.15
COMMD4-215ENST00000566843 ZNF214Q9UL59 606 aaPredicted RBP16■□□□□ 0.15
COMMD4-215ENST00000566843 BARX2Q9UMQ3 279 aaPredicted RBP16■□□□□ 0.15
COMMD4-215ENST00000566843 ADAMTS5Q9UNA0 930 aa16■□□□□ 0.15
COMMD4-215ENST00000566843 H3BNH8 94 aa15.99■□□□□ 0.15
COMMD4-215ENST00000566843 ACKR2O00590 384 aa15.99■□□□□ 0.15
COMMD4-215ENST00000566843 GRID2O43424 1007 aa15.99■□□□□ 0.15
COMMD4-215ENST00000566843 TRPA1O75762 1119 aa15.99■□□□□ 0.15
COMMD4-215ENST00000566843 H6PDO95479 791 aa15.99■□□□□ 0.15
COMMD4-215ENST00000566843 CXCL8P10145 99 aa15.99■□□□□ 0.15
COMMD4-215ENST00000566843 MPSTP25325 297 aa15.99■□□□□ 0.15
COMMD4-215ENST00000566843 MSX2P35548 267 aaPredicted RBP15.99■□□□□ 0.15
COMMD4-215ENST00000566843 OSTNP61366 133 aa15.99■□□□□ 0.15
COMMD4-215ENST00000566843 TUBA4AP68366 448 aa15.99■□□□□ 0.15
COMMD4-215ENST00000566843 NSUN2Q08J23 767 aaKnown RBP eCLIP15.99■□□□□ 0.15
COMMD4-215ENST00000566843 TMED1Q13445 227 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms