RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 FBXL12Q9NXK8 326 aa15.65■□□□□ 0.1
CMTM3-212ENST00000566121 ARHGEF38Q9NXL2 777 aa15.65■□□□□ 0.1
CMTM3-212ENST00000566121 KNTC1P50748 2209 aa15.65■□□□□ 0.1
CMTM3-212ENST00000566121 A0A1W2PPC4 97 aa15.64■□□□□ 0.09
CMTM3-212ENST00000566121 LRRC72A6NJI9 287 aa15.64■□□□□ 0.09
CMTM3-212ENST00000566121 DRGXA6NNA5 263 aa15.64■□□□□ 0.09
CMTM3-212ENST00000566121 SLC7A4O43246 635 aa15.64■□□□□ 0.09
CMTM3-212ENST00000566121 SH3BP5O60239 455 aa15.64■□□□□ 0.09
CMTM3-212ENST00000566121 PCDHGA12O60330 932 aa15.64■□□□□ 0.09
CMTM3-212ENST00000566121 MOCS2O96007 188 aaPredicted RBP15.64■□□□□ 0.09
CMTM3-212ENST00000566121 CYP11B1P15538 503 aa15.64■□□□□ 0.09
CMTM3-212ENST00000566121 GOT1P17174 413 aa15.64■□□□□ 0.09
CMTM3-212ENST00000566121 GALCP54803 685 aa15.64■□□□□ 0.09
CMTM3-212ENST00000566121 CDH4P55283 916 aa15.64■□□□□ 0.09
CMTM3-212ENST00000566121 PITX1P78337 314 aaPredicted RBP15.64■□□□□ 0.09
CMTM3-212ENST00000566121 AUHQ13825 339 aaKnown RBP15.64■□□□□ 0.09
CMTM3-212ENST00000566121 DRAP1Q14919 205 aaPredicted RBP15.64■□□□□ 0.09
CMTM3-212ENST00000566121 HLA-BQ31612 363 aa15.64■□□□□ 0.09
CMTM3-212ENST00000566121 DPCR1Q3MIW9 517 aa15.64■□□□□ 0.09
CMTM3-212ENST00000566121 TCP11X2Q5H9J9 407 aa15.64■□□□□ 0.09
CMTM3-212ENST00000566121 RNF219Q5W0B1 726 aaPredicted RBP15.64■□□□□ 0.09
CMTM3-212ENST00000566121 KIAA0895LQ68EN5 471 aa15.64■□□□□ 0.09
CMTM3-212ENST00000566121 CXorf57Q6NSI4 855 aaKnown RBP15.64■□□□□ 0.09
CMTM3-212ENST00000566121 UNQ6494/PRO21346Q6UXR6 183 aa15.64■□□□□ 0.09
CMTM3-212ENST00000566121 RBM43Q6ZSC3 357 aaKnown RBP15.64■□□□□ 0.09
CMTM3-212ENST00000566121 FAM183BPQ6ZVS7 135 aa15.64■□□□□ 0.09
CMTM3-212ENST00000566121 NAXDQ8IW45 347 aa15.64■□□□□ 0.09
CMTM3-212ENST00000566121 IGSF8Q969P0 613 aa15.64■□□□□ 0.09
CMTM3-212ENST00000566121 C18orf8Q96DM3 657 aa15.64■□□□□ 0.09
CMTM3-212ENST00000566121 SPAG5Q96R06 1193 aa15.64■□□□□ 0.09
CMTM3-212ENST00000566121 CDC6Q99741 560 aa15.64■□□□□ 0.09
CMTM3-212ENST00000566121 FEM1AQ9BSK4 669 aa15.64■□□□□ 0.09
CMTM3-212ENST00000566121 NUP62CLQ9H1M0 184 aa15.64■□□□□ 0.09
CMTM3-212ENST00000566121 GAREM1Q9H706 876 aa15.64■□□□□ 0.09
CMTM3-212ENST00000566121 FAM204AQ9H8W3 233 aa15.64■□□□□ 0.09
CMTM3-212ENST00000566121 FSCN3Q9NQT6 498 aa15.64■□□□□ 0.09
CMTM3-212ENST00000566121 SLCO3A1Q9UIG8 710 aa15.64■□□□□ 0.09
CMTM3-212ENST00000566121 PCOLCE2Q9UKZ9 415 aa15.64■□□□□ 0.09
CMTM3-212ENST00000566121 STAP1Q9ULZ2 295 aa15.64■□□□□ 0.09
CMTM3-212ENST00000566121 ADAMTS9Q9P2N4 1935 aa15.64■□□□□ 0.09
CMTM3-212ENST00000566121 SPEGQ15772 3267 aa15.63■□□□□ 0.09
CMTM3-212ENST00000566121 IGLV3-10A0A075B6K4 115 aa15.63■□□□□ 0.09
CMTM3-212ENST00000566121 VILLO15195 856 aa15.63■□□□□ 0.09
CMTM3-212ENST00000566121 FLRT2O43155 660 aa15.63■□□□□ 0.09
CMTM3-212ENST00000566121 ENDOD1O94919 500 aa15.63■□□□□ 0.09
CMTM3-212ENST00000566121 ERBB2P04626 1255 aa15.63■□□□□ 0.09
CMTM3-212ENST00000566121 IGHV4-34P06331 123 aa15.63■□□□□ 0.09
CMTM3-212ENST00000566121 UCHL3P15374 230 aa15.63■□□□□ 0.09
CMTM3-212ENST00000566121 SLC8A1P32418 973 aa15.63■□□□□ 0.09
CMTM3-212ENST00000566121 CTSKP43235 329 aa15.63■□□□□ 0.09
CMTM3-212ENST00000566121 APBA1Q02410 837 aa15.63■□□□□ 0.09
CMTM3-212ENST00000566121 FOXC1Q12948 553 aa15.63■□□□□ 0.09
CMTM3-212ENST00000566121 SLC25A52Q3SY17 297 aa15.63■□□□□ 0.09
CMTM3-212ENST00000566121 OR6B2Q6IFH4 312 aa15.63■□□□□ 0.09
CMTM3-212ENST00000566121 MMS22LQ6ZRQ5 1243 aa15.63■□□□□ 0.09
CMTM3-212ENST00000566121 SND1Q7KZF4 910 aaKnown RBP eCLIP15.63■□□□□ 0.09
CMTM3-212ENST00000566121 SETD3Q86TU7 594 aaPredicted RBP15.63■□□□□ 0.09
CMTM3-212ENST00000566121 CREBRFQ8IUR6 639 aa15.63■□□□□ 0.09
CMTM3-212ENST00000566121 APCDD1Q8J025 514 aa15.63■□□□□ 0.09
CMTM3-212ENST00000566121 ZNF366Q8N895 744 aa15.63■□□□□ 0.09
CMTM3-212ENST00000566121 SKA1Q96BD8 255 aa15.63■□□□□ 0.09
CMTM3-212ENST00000566121 ERLEC1Q96DZ1 483 aa15.63■□□□□ 0.09
CMTM3-212ENST00000566121 MIR1-1HGQ9H1L0 117 aa15.63■□□□□ 0.09
CMTM3-212ENST00000566121 WDCPQ9H6R7 721 aa15.63■□□□□ 0.09
CMTM3-212ENST00000566121 TM7SF3Q9NS93 570 aa15.63■□□□□ 0.09
CMTM3-212ENST00000566121 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.63■□□□□ 0.09
CMTM3-212ENST00000566121 AJAP1Q9UKB5 411 aaPredicted RBP15.63■□□□□ 0.09
CMTM3-212ENST00000566121 HS3ST2Q9Y278 367 aa15.63■□□□□ 0.09
CMTM3-212ENST00000566121 ANKRD6Q9Y2G4 727 aa15.63■□□□□ 0.09
CMTM3-212ENST00000566121 HS3ST4Q9Y661 456 aa15.63■□□□□ 0.09
CMTM3-212ENST00000566121 ZFYVE26Q68DK2 2539 aa15.63■□□□□ 0.09
CMTM3-212ENST00000566121 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.62■□□□□ 0.09
CMTM3-212ENST00000566121 LRRC10BA6NIK2 292 aa15.62■□□□□ 0.09
CMTM3-212ENST00000566121 TTC34A8MYJ7 566 aa15.62■□□□□ 0.09
CMTM3-212ENST00000566121 MCF2LO15068 1137 aa15.62■□□□□ 0.09
CMTM3-212ENST00000566121 LATO43561 262 aa15.62■□□□□ 0.09
CMTM3-212ENST00000566121 CAPNS1P04632 268 aa15.62■□□□□ 0.09
CMTM3-212ENST00000566121 CTSOP43234 321 aaPredicted RBP15.62■□□□□ 0.09
CMTM3-212ENST00000566121 FAM193AP78312 1265 aa15.62■□□□□ 0.09
CMTM3-212ENST00000566121 ZNF177Q13360 481 aaPredicted RBP15.62■□□□□ 0.09
CMTM3-212ENST00000566121 KCNJ12Q14500 433 aa15.62■□□□□ 0.09
CMTM3-212ENST00000566121 KIF19Q2TAC6 998 aa15.62■□□□□ 0.09
CMTM3-212ENST00000566121 OTUD1Q5VV17 481 aaPredicted RBP15.62■□□□□ 0.09
CMTM3-212ENST00000566121 FAM46CQ5VWP2 391 aa15.62■□□□□ 0.09
CMTM3-212ENST00000566121 ZNF783Q6ZMS7 281 aa15.62■□□□□ 0.09
CMTM3-212ENST00000566121 DSG4Q86SJ6 1040 aa15.62■□□□□ 0.09
CMTM3-212ENST00000566121 ZNF683Q8IZ20 524 aa15.62■□□□□ 0.09
CMTM3-212ENST00000566121 MSANTD4Q8NCY6 345 aa15.62■□□□□ 0.09
CMTM3-212ENST00000566121 RNF34Q969K3 372 aa15.62■□□□□ 0.09
CMTM3-212ENST00000566121 HAPLN3Q96S86 360 aa15.62■□□□□ 0.09
CMTM3-212ENST00000566121 NEUROG2Q9H2A3 272 aa15.62■□□□□ 0.09
CMTM3-212ENST00000566121 LMBRD1Q9NUN5 540 aa15.62■□□□□ 0.09
CMTM3-212ENST00000566121 TMEM59LQ9UK28 342 aa15.62■□□□□ 0.09
CMTM3-212ENST00000566121 APOBEC2Q9Y235 224 aaKnown RBP15.62■□□□□ 0.09
CMTM3-212ENST00000566121 PCDHB9Q9Y5E1 797 aa15.62■□□□□ 0.09
CMTM3-212ENST00000566121 SPAARA0A1B0GVQ0 90 aa15.61■□□□□ 0.09
CMTM3-212ENST00000566121 A0A1B0GVT2 93 aa15.61■□□□□ 0.09
CMTM3-212ENST00000566121 M0QYT0 321 aa15.61■□□□□ 0.09
CMTM3-212ENST00000566121 MID1O15344 667 aa15.61■□□□□ 0.09
CMTM3-212ENST00000566121 YKT6O15498 198 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms