RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 KCNAB2Q13303 367 aa9.38□□□□□ -0.91
VPS9D1-205ENST00000565452 STK38Q15208 465 aa9.38□□□□□ -0.91
VPS9D1-205ENST00000565452 TRIP4Q15650 581 aaPredicted RBP9.38□□□□□ -0.91
VPS9D1-205ENST00000565452 POM121L1PQ3SYA9 428 aa9.38□□□□□ -0.91
VPS9D1-205ENST00000565452 ZNF667Q5HYK9 610 aa9.38□□□□□ -0.91
VPS9D1-205ENST00000565452 MPP7Q5T2T1 576 aa9.38□□□□□ -0.91
VPS9D1-205ENST00000565452 CLEC20AQ6ZU45 233 aa9.38□□□□□ -0.91
VPS9D1-205ENST00000565452 UNC93AQ86WB7 457 aa9.38□□□□□ -0.91
VPS9D1-205ENST00000565452 TRIM69Q86WT6 500 aa9.38□□□□□ -0.91
VPS9D1-205ENST00000565452 DCP2Q8IU60 420 aaKnown RBP9.38□□□□□ -0.91
VPS9D1-205ENST00000565452 CCDC117Q8IWD4 279 aaPredicted RBP9.38□□□□□ -0.91
VPS9D1-205ENST00000565452 C12orf29Q8N999 325 aa9.38□□□□□ -0.91
VPS9D1-205ENST00000565452 LINC00301Q8NCQ3 95 aa9.38□□□□□ -0.91
VPS9D1-205ENST00000565452 USP28Q96RU2 1077 aa9.38□□□□□ -0.91
VPS9D1-205ENST00000565452 CGRRF1Q99675 332 aa9.38□□□□□ -0.91
VPS9D1-205ENST00000565452 SRRTQ9BXP5 876 aaKnown RBP9.38□□□□□ -0.91
VPS9D1-205ENST00000565452 IRX2Q9BZI1 471 aaPredicted RBP9.38□□□□□ -0.91
VPS9D1-205ENST00000565452 STRADBQ9C0K7 418 aa9.38□□□□□ -0.91
VPS9D1-205ENST00000565452 DNAI2Q9GZS0 605 aa9.38□□□□□ -0.91
VPS9D1-205ENST00000565452 XYLT2Q9H1B5 865 aa9.38□□□□□ -0.91
VPS9D1-205ENST00000565452 SMYD3Q9H7B4 428 aa9.38□□□□□ -0.91
VPS9D1-205ENST00000565452 VRTNQ9H8Y1 702 aa9.38□□□□□ -0.91
VPS9D1-205ENST00000565452 OLFML3Q9NRN5 406 aa9.38□□□□□ -0.91
VPS9D1-205ENST00000565452 SALL4Q9UJQ4 1053 aa9.38□□□□□ -0.91
VPS9D1-205ENST00000565452 CLIC4Q9Y696 253 aa9.38□□□□□ -0.91
VPS9D1-205ENST00000565452 CSNK1G3Q9Y6M4 447 aa9.38□□□□□ -0.91
VPS9D1-205ENST00000565452 U3KQA8 63 aa9.38□□□□□ -0.91
VPS9D1-205ENST00000565452 CKAP5Q14008 2032 aa9.38□□□□□ -0.91
VPS9D1-205ENST00000565452 SPTLC2O15270 562 aa9.37□□□□□ -0.91
VPS9D1-205ENST00000565452 AGFG2O95081 481 aa9.37□□□□□ -0.91
VPS9D1-205ENST00000565452 SRPRAP08240 638 aaKnown RBP9.37□□□□□ -0.91
VPS9D1-205ENST00000565452 POU3F2P20265 443 aaPredicted RBP9.37□□□□□ -0.91
VPS9D1-205ENST00000565452 CD70P32970 193 aa9.37□□□□□ -0.91
VPS9D1-205ENST00000565452 NNMTP40261 264 aa9.37□□□□□ -0.91
VPS9D1-205ENST00000565452 PKP1Q13835 747 aa9.37□□□□□ -0.91
VPS9D1-205ENST00000565452 SPIDRQ14159 915 aa9.37□□□□□ -0.91
VPS9D1-205ENST00000565452 PSMD6Q15008 389 aa9.37□□□□□ -0.91
VPS9D1-205ENST00000565452 NR0B2Q15466 257 aa9.37□□□□□ -0.91
VPS9D1-205ENST00000565452 FAM46CQ5VWP2 391 aa9.37□□□□□ -0.91
VPS9D1-205ENST00000565452 RNF219Q5W0B1 726 aaPredicted RBP9.37□□□□□ -0.91
VPS9D1-205ENST00000565452 GUSBP11Q6P575 273 aa9.37□□□□□ -0.91
VPS9D1-205ENST00000565452 STXBP4Q6ZWJ1 553 aa9.37□□□□□ -0.91
VPS9D1-205ENST00000565452 SV2BQ7L1I2 683 aa9.37□□□□□ -0.91
VPS9D1-205ENST00000565452 RAB11FIP2Q7L804 512 aa9.37□□□□□ -0.91
VPS9D1-205ENST00000565452 STK40Q8N2I9 435 aa9.37□□□□□ -0.91
VPS9D1-205ENST00000565452 FIBINQ8TAL6 211 aa9.37□□□□□ -0.91
VPS9D1-205ENST00000565452 FAM174AQ8TBP5 190 aa9.37□□□□□ -0.91
VPS9D1-205ENST00000565452 CCDC127Q96BQ5 260 aa9.37□□□□□ -0.91
VPS9D1-205ENST00000565452 CYFIP2Q96F07 1278 aa9.37□□□□□ -0.91
VPS9D1-205ENST00000565452 MYO19Q96H55 970 aa9.37□□□□□ -0.91
VPS9D1-205ENST00000565452 FUCA2Q9BTY2 467 aa9.37□□□□□ -0.91
VPS9D1-205ENST00000565452 CALN1Q9BXU9 219 aa9.37□□□□□ -0.91
VPS9D1-205ENST00000565452 FAM49BQ9NUQ9 324 aa9.37□□□□□ -0.91
VPS9D1-205ENST00000565452 DNAJC28Q9NX36 388 aa9.37□□□□□ -0.91
VPS9D1-205ENST00000565452 TFIP11Q9UBB9 837 aaKnown RBP9.37□□□□□ -0.91
VPS9D1-205ENST00000565452 STOML2Q9UJZ1 356 aa9.37□□□□□ -0.91
VPS9D1-205ENST00000565452 ERVW-1Q9UQF0 538 aa9.37□□□□□ -0.91
VPS9D1-205ENST00000565452 PLAAQ9Y263 795 aa9.37□□□□□ -0.91
VPS9D1-205ENST00000565452 USP3Q9Y6I4 520 aa9.37□□□□□ -0.91
VPS9D1-205ENST00000565452 C2CD3Q4AC94 2353 aa9.37□□□□□ -0.91
VPS9D1-205ENST00000565452 ICE1Q9Y2F5 2266 aa9.36□□□□□ -0.91
VPS9D1-205ENST00000565452 UBE4BO95155 1302 aa9.36□□□□□ -0.91
VPS9D1-205ENST00000565452 TTC34A8MYJ7 566 aa9.36□□□□□ -0.91
VPS9D1-205ENST00000565452 H3BM21 787 aa9.36□□□□□ -0.91
VPS9D1-205ENST00000565452 SLC31A1O15431 190 aa9.36□□□□□ -0.91
VPS9D1-205ENST00000565452 PLRG1O43660 514 aaKnown RBP9.36□□□□□ -0.91
VPS9D1-205ENST00000565452 CUTAO60888 179 aa9.36□□□□□ -0.91
VPS9D1-205ENST00000565452 TBL1XO60907 577 aa9.36□□□□□ -0.91
VPS9D1-205ENST00000565452 RTN2O75298 545 aa9.36□□□□□ -0.91
VPS9D1-205ENST00000565452 NEBLO76041 1014 aa9.36□□□□□ -0.91
VPS9D1-205ENST00000565452 MOCS3O95396 460 aa9.36□□□□□ -0.91
VPS9D1-205ENST00000565452 LATS1O95835 1130 aa9.36□□□□□ -0.91
VPS9D1-205ENST00000565452 JMJD7P0C870 316 aa9.36□□□□□ -0.91
VPS9D1-205ENST00000565452 IDEP14735 1019 aa9.36□□□□□ -0.91
VPS9D1-205ENST00000565452 AKT2P31751 481 aa9.36□□□□□ -0.91
VPS9D1-205ENST00000565452 CSKP41240 450 aa9.36□□□□□ -0.91
VPS9D1-205ENST00000565452 CASP5P51878 434 aa9.36□□□□□ -0.91
VPS9D1-205ENST00000565452 NDST1P52848 882 aa9.36□□□□□ -0.91
VPS9D1-205ENST00000565452 POLE2P56282 527 aa9.36□□□□□ -0.91
VPS9D1-205ENST00000565452 DNM1Q05193 864 aaKnown RBP9.36□□□□□ -0.91
VPS9D1-205ENST00000565452 SRSF6Q13247 344 aaKnown RBP9.36□□□□□ -0.91
VPS9D1-205ENST00000565452 SNRNP35Q16560 246 aaKnown RBP9.36□□□□□ -0.91
VPS9D1-205ENST00000565452 SGSM1Q2NKQ1 1148 aa9.36□□□□□ -0.91
VPS9D1-205ENST00000565452 ZNF699Q32M78 642 aa9.36□□□□□ -0.91
VPS9D1-205ENST00000565452 ZNF542PQ5EBM4 170 aa9.36□□□□□ -0.91
VPS9D1-205ENST00000565452 FHL5Q5TD97 284 aa9.36□□□□□ -0.91
VPS9D1-205ENST00000565452 FOXD4L5Q5VV16 416 aaPredicted RBP9.36□□□□□ -0.91
VPS9D1-205ENST00000565452 FAM173BQ6P4H8 233 aa9.36□□□□□ -0.91
VPS9D1-205ENST00000565452 CRTC1Q6UUV9 634 aa9.36□□□□□ -0.91
VPS9D1-205ENST00000565452 FOXD4L4Q8WXT5 416 aaPredicted RBP9.36□□□□□ -0.91
VPS9D1-205ENST00000565452 ZNF516Q92618 1163 aa9.36□□□□□ -0.91
VPS9D1-205ENST00000565452 NAT6Q93015 286 aa9.36□□□□□ -0.91
VPS9D1-205ENST00000565452 MRGPRX3Q96LB0 322 aa9.36□□□□□ -0.91
VPS9D1-205ENST00000565452 IL12RB2Q99665 862 aa9.36□□□□□ -0.91
VPS9D1-205ENST00000565452 OLA1Q9NTK5 396 aaKnown RBP9.36□□□□□ -0.91
VPS9D1-205ENST00000565452 CA5BQ9Y2D0 317 aa9.36□□□□□ -0.91
VPS9D1-205ENST00000565452 HBS1LQ9Y450 684 aaKnown RBP9.36□□□□□ -0.91
VPS9D1-205ENST00000565452 CEP83Q9Y592 693 aa9.36□□□□□ -0.91
VPS9D1-205ENST00000565452 FBN2P35556 2912 aa9.35□□□□□ -0.91
VPS9D1-205ENST00000565452 TPP1O14773 563 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms