RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 TTC17Q96AE7 1141 aa14.05□□□□□ -0.16
VPS9D1-204ENST00000565023 MYO19Q96H55 970 aa14.05□□□□□ -0.16
VPS9D1-204ENST00000565023 MRGPRX3Q96LB0 322 aa14.05□□□□□ -0.16
VPS9D1-204ENST00000565023 CFAP57Q96MR6 1250 aa14.05□□□□□ -0.16
VPS9D1-204ENST00000565023 TTYH3Q9C0H2 523 aa14.05□□□□□ -0.16
VPS9D1-204ENST00000565023 IFNKQ9P0W0 207 aa14.05□□□□□ -0.16
VPS9D1-204ENST00000565023 SLCO3A1Q9UIG8 710 aa14.05□□□□□ -0.16
VPS9D1-204ENST00000565023 MYO6Q9UM54 1294 aa14.05□□□□□ -0.16
VPS9D1-204ENST00000565023 FASNP49327 2511 aaKnown RBP14.04□□□□□ -0.16
VPS9D1-204ENST00000565023 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.04□□□□□ -0.16
VPS9D1-204ENST00000565023 OXTRP30559 389 aa14.04□□□□□ -0.16
VPS9D1-204ENST00000565023 ECT2LQ008S8 904 aa14.04□□□□□ -0.16
VPS9D1-204ENST00000565023 ZNF177Q13360 481 aaPredicted RBP14.04□□□□□ -0.16
VPS9D1-204ENST00000565023 FIGNQ5HY92 759 aa14.04□□□□□ -0.16
VPS9D1-204ENST00000565023 SYCP2LQ5T4T6 812 aa14.04□□□□□ -0.16
VPS9D1-204ENST00000565023 DAB2IPQ5VWQ8 1189 aa14.04□□□□□ -0.16
VPS9D1-204ENST00000565023 ZNF776Q68DI1 518 aaPredicted RBP14.04□□□□□ -0.16
VPS9D1-204ENST00000565023 METTL3Q86U44 580 aaKnown RBP14.04□□□□□ -0.16
VPS9D1-204ENST00000565023 FAM131BQ86XD5 332 aa14.04□□□□□ -0.16
VPS9D1-204ENST00000565023 ZCCHC9Q8N567 271 aaKnown RBP14.04□□□□□ -0.16
VPS9D1-204ENST00000565023 OR52K2Q8NGK3 314 aa14.04□□□□□ -0.16
VPS9D1-204ENST00000565023 BAP1Q92560 729 aa14.04□□□□□ -0.16
VPS9D1-204ENST00000565023 FOXJ1Q92949 421 aa14.04□□□□□ -0.16
VPS9D1-204ENST00000565023 ZNF419Q96HQ0 510 aaPredicted RBP14.04□□□□□ -0.16
VPS9D1-204ENST00000565023 PCDHB18PQ96TA0 734 aa14.04□□□□□ -0.16
VPS9D1-204ENST00000565023 NUP58Q9BVL2 599 aa14.04□□□□□ -0.16
VPS9D1-204ENST00000565023 EDEM3Q9BZQ6 932 aa14.04□□□□□ -0.16
VPS9D1-204ENST00000565023 RRN3Q9NYV6 651 aa14.04□□□□□ -0.16
VPS9D1-204ENST00000565023 EVLQ9UI08 416 aaPredicted RBP14.04□□□□□ -0.16
VPS9D1-204ENST00000565023 SLC6A14Q9UN76 642 aa14.04□□□□□ -0.16
VPS9D1-204ENST00000565023 ASCC3Q8N3C0 2202 aaKnown RBP14.04□□□□□ -0.16
VPS9D1-204ENST00000565023 FAM47DPA6NHR8 397 aa14.03□□□□□ -0.16
VPS9D1-204ENST00000565023 I6L893 689 aaPredicted RBP14.03□□□□□ -0.16
VPS9D1-204ENST00000565023 CDX4O14627 284 aaPredicted RBP14.03□□□□□ -0.16
VPS9D1-204ENST00000565023 BNIP3LO60238 219 aa14.03□□□□□ -0.16
VPS9D1-204ENST00000565023 SRGAP2O75044 1071 aa14.03□□□□□ -0.16
VPS9D1-204ENST00000565023 CNTN5O94779 1100 aa14.03□□□□□ -0.16
VPS9D1-204ENST00000565023 CYP1A1P04798 512 aaPredicted RBP14.03□□□□□ -0.16
VPS9D1-204ENST00000565023 VAV1P15498 845 aa14.03□□□□□ -0.16
VPS9D1-204ENST00000565023 ACSL1P33121 698 aa14.03□□□□□ -0.16
VPS9D1-204ENST00000565023 DPP6P42658 865 aa14.03□□□□□ -0.16
VPS9D1-204ENST00000565023 PSMD8P48556 350 aa14.03□□□□□ -0.16
VPS9D1-204ENST00000565023 CXCR3P49682 368 aa14.03□□□□□ -0.16
VPS9D1-204ENST00000565023 GFPT1Q06210 699 aaPredicted RBP14.03□□□□□ -0.16
VPS9D1-204ENST00000565023 C15orf59Q2T9L4 293 aaPredicted RBP14.03□□□□□ -0.16
VPS9D1-204ENST00000565023 HNRNPA1L2Q32P51 320 aaKnown RBP14.03□□□□□ -0.16
VPS9D1-204ENST00000565023 SLC25A52Q3SY17 297 aa14.03□□□□□ -0.16
VPS9D1-204ENST00000565023 TTC31Q49AM3 519 aaPredicted RBP14.03□□□□□ -0.16
VPS9D1-204ENST00000565023 ACCSLQ4AC99 568 aa14.03□□□□□ -0.16
VPS9D1-204ENST00000565023 RAB6CQ53S08 254 aa14.03□□□□□ -0.16
VPS9D1-204ENST00000565023 ALFQ53S48 1182 aa14.03□□□□□ -0.16
VPS9D1-204ENST00000565023 WDR45BQ5MNZ6 344 aa14.03□□□□□ -0.16
VPS9D1-204ENST00000565023 BRMS1LQ5PSV4 323 aa14.03□□□□□ -0.16
VPS9D1-204ENST00000565023 TTC39BQ5VTQ0 682 aaPredicted RBP14.03□□□□□ -0.16
VPS9D1-204ENST00000565023 CXorf57Q6NSI4 855 aaKnown RBP14.03□□□□□ -0.16
VPS9D1-204ENST00000565023 SLC23A3Q6PIS1 610 aa14.03□□□□□ -0.16
VPS9D1-204ENST00000565023 MMAAQ8IVH4 418 aaKnown RBP14.03□□□□□ -0.16
VPS9D1-204ENST00000565023 STK40Q8N2I9 435 aa14.03□□□□□ -0.16
VPS9D1-204ENST00000565023 JOSD2Q8TAC2 188 aa14.03□□□□□ -0.16
VPS9D1-204ENST00000565023 RXFP2Q8WXD0 754 aa14.03□□□□□ -0.16
VPS9D1-204ENST00000565023 XPO4Q9C0E2 1151 aaKnown RBP14.03□□□□□ -0.16
VPS9D1-204ENST00000565023 RAB6CQ9H0N0 254 aa14.03□□□□□ -0.16
VPS9D1-204ENST00000565023 MUC3BQ9H195 1237 aa14.03□□□□□ -0.16
VPS9D1-204ENST00000565023 C6orf106Q9H6K1 298 aaPredicted RBP14.03□□□□□ -0.16
VPS9D1-204ENST00000565023 ARHGEF38Q9NXL2 777 aa14.03□□□□□ -0.16
VPS9D1-204ENST00000565023 MPP6Q9NZW5 540 aa14.03□□□□□ -0.16
VPS9D1-204ENST00000565023 EIF2B4Q9UI10 523 aaKnown RBP14.03□□□□□ -0.16
VPS9D1-204ENST00000565023 TMEM59LQ9UK28 342 aa14.03□□□□□ -0.16
VPS9D1-204ENST00000565023 VPS28Q9UK41 221 aa14.03□□□□□ -0.16
VPS9D1-204ENST00000565023 CNOT1A5YKK6 2376 aaKnown RBP14.03□□□□□ -0.16
VPS9D1-204ENST00000565023 ANKRD11Q6UB99 2663 aaPredicted RBP14.02□□□□□ -0.16
VPS9D1-204ENST00000565023 DOCK4Q8N1I0 1966 aa14.02□□□□□ -0.16
VPS9D1-204ENST00000565023 PCDH15Q96QU1 1955 aa14.02□□□□□ -0.16
VPS9D1-204ENST00000565023 EDDM13A0A1B0GTR0 161 aa14.02□□□□□ -0.17
VPS9D1-204ENST00000565023 GIPC1O14908 333 aa14.02□□□□□ -0.17
VPS9D1-204ENST00000565023 MID1O15344 667 aa14.02□□□□□ -0.17
VPS9D1-204ENST00000565023 RNASEH1O60930 286 aaKnown RBP14.02□□□□□ -0.17
VPS9D1-204ENST00000565023 F9P00740 461 aa14.02□□□□□ -0.17
VPS9D1-204ENST00000565023 RHOCP08134 193 aa14.02□□□□□ -0.17
VPS9D1-204ENST00000565023 SRPRAP08240 638 aaKnown RBP14.02□□□□□ -0.17
VPS9D1-204ENST00000565023 GNSP15586 552 aa14.02□□□□□ -0.17
VPS9D1-204ENST00000565023 FERP16591 822 aa14.02□□□□□ -0.17
VPS9D1-204ENST00000565023 MMP8P22894 467 aa14.02□□□□□ -0.17
VPS9D1-204ENST00000565023 RDXP35241 583 aaKnown RBP14.02□□□□□ -0.17
VPS9D1-204ENST00000565023 SCNN1AP37088 669 aa14.02□□□□□ -0.17
VPS9D1-204ENST00000565023 NNMTP40261 264 aa14.02□□□□□ -0.17
VPS9D1-204ENST00000565023 NSFP46459 744 aaKnown RBP14.02□□□□□ -0.17
VPS9D1-204ENST00000565023 NOVA1P51513 510 aaKnown RBP14.02□□□□□ -0.17
VPS9D1-204ENST00000565023 PSAPL1Q6NUJ1 521 aa14.02□□□□□ -0.17
VPS9D1-204ENST00000565023 LRRC31Q6UY01 552 aa14.02□□□□□ -0.17
VPS9D1-204ENST00000565023 TRIM72Q6ZMU5 477 aa14.02□□□□□ -0.17
VPS9D1-204ENST00000565023 IRF2BP2Q7Z5L9 587 aa14.02□□□□□ -0.17
VPS9D1-204ENST00000565023 TFAP2DQ7Z6R9 452 aa14.02□□□□□ -0.17
VPS9D1-204ENST00000565023 CEP76Q8TAP6 659 aa14.02□□□□□ -0.17
VPS9D1-204ENST00000565023 BTBD1Q9H0C5 482 aa14.02□□□□□ -0.17
VPS9D1-204ENST00000565023 ADAM22Q9P0K1 906 aa14.02□□□□□ -0.17
VPS9D1-204ENST00000565023 SLC25A13Q9UJS0 675 aa14.02□□□□□ -0.17
VPS9D1-204ENST00000565023 NCKAP1Q9Y2A7 1128 aa14.02□□□□□ -0.17
VPS9D1-204ENST00000565023 PAXBP1Q9Y5B6 917 aa14.02□□□□□ -0.17
VPS9D1-204ENST00000565023 A0A1W2PP55 124 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms