RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 FNTAP49354 379 aa11.4□□□□□ -0.58
SF3B3-205ENST00000564899 OTUD4Q01804 1114 aaKnown RBP11.4□□□□□ -0.58
SF3B3-205ENST00000564899 GBE1Q04446 702 aa11.4□□□□□ -0.58
SF3B3-205ENST00000564899 USP4Q13107 963 aa11.4□□□□□ -0.58
SF3B3-205ENST00000564899 SNX1Q13596 522 aa11.4□□□□□ -0.58
SF3B3-205ENST00000564899 PAFAH1B3Q15102 231 aaKnown RBP11.4□□□□□ -0.58
SF3B3-205ENST00000564899 NOMO1Q15155 1222 aa11.4□□□□□ -0.58
SF3B3-205ENST00000564899 CCNG2Q16589 344 aa11.4□□□□□ -0.58
SF3B3-205ENST00000564899 FAM133BQ5BKY9 247 aaKnown RBP11.4□□□□□ -0.58
SF3B3-205ENST00000564899 RABGAP1LQ5R372 815 aa11.4□□□□□ -0.58
SF3B3-205ENST00000564899 ADGRF1Q5T601 910 aa11.4□□□□□ -0.58
SF3B3-205ENST00000564899 RFWD3Q6PCD5 774 aa11.4□□□□□ -0.58
SF3B3-205ENST00000564899 NPNTQ6UXI9 565 aa11.4□□□□□ -0.58
SF3B3-205ENST00000564899 ARID3BQ8IVW6 561 aaPredicted RBP11.4□□□□□ -0.58
SF3B3-205ENST00000564899 MMGT1Q8N4V1 131 aa11.4□□□□□ -0.58
SF3B3-205ENST00000564899 ZSCAN18Q8TBC5 510 aaPredicted RBP11.4□□□□□ -0.58
SF3B3-205ENST00000564899 P3H4Q92791 437 aa11.4□□□□□ -0.58
SF3B3-205ENST00000564899 IGSF8Q969P0 613 aa11.4□□□□□ -0.58
SF3B3-205ENST00000564899 ZYG11BQ9C0D3 744 aa11.4□□□□□ -0.58
SF3B3-205ENST00000564899 LRRC19Q9H756 370 aa11.4□□□□□ -0.58
SF3B3-205ENST00000564899 KIF9Q9HAQ2 790 aa11.4□□□□□ -0.58
SF3B3-205ENST00000564899 TDP1Q9NUW8 608 aa11.4□□□□□ -0.58
SF3B3-205ENST00000564899 DLL3Q9NYJ7 618 aa11.4□□□□□ -0.58
SF3B3-205ENST00000564899 MPP6Q9NZW5 540 aa11.4□□□□□ -0.58
SF3B3-205ENST00000564899 DLGAP2Q9P1A6 1054 aa11.4□□□□□ -0.58
SF3B3-205ENST00000564899 SAE1Q9UBE0 346 aaPredicted RBP11.4□□□□□ -0.58
SF3B3-205ENST00000564899 PPARGC1AQ9UBK2 798 aaKnown RBP11.4□□□□□ -0.58
SF3B3-205ENST00000564899 STOML2Q9UJZ1 356 aa11.4□□□□□ -0.58
SF3B3-205ENST00000564899 HEY1Q9Y5J3 304 aa11.4□□□□□ -0.58
SF3B3-205ENST00000564899 OBSL1O75147 1896 aa11.4□□□□□ -0.59
SF3B3-205ENST00000564899 ANAPC1Q9H1A4 1944 aa11.39□□□□□ -0.59
SF3B3-205ENST00000564899 E2F8A0AVK6 867 aa11.39□□□□□ -0.59
SF3B3-205ENST00000564899 DRGXA6NNA5 263 aa11.39□□□□□ -0.59
SF3B3-205ENST00000564899 TRDMT1O14717 391 aaKnown RBP11.39□□□□□ -0.59
SF3B3-205ENST00000564899 LIASO43766 372 aa11.39□□□□□ -0.59
SF3B3-205ENST00000564899 TSPAN3O60637 253 aa11.39□□□□□ -0.59
SF3B3-205ENST00000564899 MAP3K6O95382 1288 aa11.39□□□□□ -0.59
SF3B3-205ENST00000564899 TCF3P15923 654 aa11.39□□□□□ -0.59
SF3B3-205ENST00000564899 RHOQP17081 205 aa11.39□□□□□ -0.59
SF3B3-205ENST00000564899 WEE1P30291 646 aa11.39□□□□□ -0.59
SF3B3-205ENST00000564899 SERPINB6P35237 376 aa11.39□□□□□ -0.59
SF3B3-205ENST00000564899 COILP38432 576 aaPredicted RBP11.39□□□□□ -0.59
SF3B3-205ENST00000564899 NR2C2P49116 596 aa11.39□□□□□ -0.59
SF3B3-205ENST00000564899 IRAK1P51617 712 aa11.39□□□□□ -0.59
SF3B3-205ENST00000564899 EIF3EP60228 445 aaKnown RBP11.39□□□□□ -0.59
SF3B3-205ENST00000564899 ZNF77Q15935 545 aa11.39□□□□□ -0.59
SF3B3-205ENST00000564899 ARTNQ5T4W7 220 aa11.39□□□□□ -0.59
SF3B3-205ENST00000564899 CCDC70Q6NSX1 233 aa11.39□□□□□ -0.59
SF3B3-205ENST00000564899 C8orf74Q6P047 294 aa11.39□□□□□ -0.59
SF3B3-205ENST00000564899 TTC27Q6P3X3 843 aa11.39□□□□□ -0.59
SF3B3-205ENST00000564899 DRICH1Q6PGQ1 229 aaPredicted RBP11.39□□□□□ -0.59
SF3B3-205ENST00000564899 CCDC137Q6PK04 289 aaKnown RBP11.39□□□□□ -0.59
SF3B3-205ENST00000564899 POTEHQ6S545 545 aa11.39□□□□□ -0.59
SF3B3-205ENST00000564899 HTR3DQ70Z44 454 aa11.39□□□□□ -0.59
SF3B3-205ENST00000564899 BZW1Q7L1Q6 419 aaKnown RBP11.39□□□□□ -0.59
SF3B3-205ENST00000564899 BBS7Q8IWZ6 715 aa11.39□□□□□ -0.59
SF3B3-205ENST00000564899 MAML2Q8IZL2 1156 aaPredicted RBP11.39□□□□□ -0.59
SF3B3-205ENST00000564899 PLCD3Q8N3E9 789 aa11.39□□□□□ -0.59
SF3B3-205ENST00000564899 RTL3Q8N8U3 475 aaKnown RBP11.39□□□□□ -0.59
SF3B3-205ENST00000564899 SLC35B2Q8TB61 432 aa11.39□□□□□ -0.59
SF3B3-205ENST00000564899 FGF13Q92913 245 aa11.39□□□□□ -0.59
SF3B3-205ENST00000564899 MYEOVQ96EZ4 313 aa11.39□□□□□ -0.59
SF3B3-205ENST00000564899 DOCK6Q96HP0 2047 aa11.39□□□□□ -0.59
SF3B3-205ENST00000564899 CCDC114Q96M63 670 aa11.39□□□□□ -0.59
SF3B3-205ENST00000564899 PRICKLE1Q96MT3 831 aaPredicted RBP11.39□□□□□ -0.59
SF3B3-205ENST00000564899 RUNDC3BQ96NL0 473 aa11.39□□□□□ -0.59
SF3B3-205ENST00000564899 MYADMQ96S97 322 aa11.39□□□□□ -0.59
SF3B3-205ENST00000564899 TBC1D17Q9HA65 648 aa11.39□□□□□ -0.59
SF3B3-205ENST00000564899 GDE1Q9NZC3 331 aa11.39□□□□□ -0.59
SF3B3-205ENST00000564899 DTLQ9NZJ0 730 aa11.39□□□□□ -0.59
SF3B3-205ENST00000564899 DNPEPQ9ULA0 475 aa11.39□□□□□ -0.59
SF3B3-205ENST00000564899 TYW5A2RUC4 315 aaKnown RBP11.38□□□□□ -0.59
SF3B3-205ENST00000564899 WASH4PA8MWX3 477 aa11.38□□□□□ -0.59
SF3B3-205ENST00000564899 H7C0C1 242 aa11.38□□□□□ -0.59
SF3B3-205ENST00000564899 CNTN5O94779 1100 aa11.38□□□□□ -0.59
SF3B3-205ENST00000564899 SP9P0CG40 484 aa11.38□□□□□ -0.59
SF3B3-205ENST00000564899 ATP5OP48047 213 aa11.38□□□□□ -0.59
SF3B3-205ENST00000564899 KCNJ1P48048 391 aa11.38□□□□□ -0.59
SF3B3-205ENST00000564899 TUBB4BP68371 445 aa11.38□□□□□ -0.59
SF3B3-205ENST00000564899 MRPS25P82663 173 aaKnown RBP11.38□□□□□ -0.59
SF3B3-205ENST00000564899 DR1Q01658 176 aa11.38□□□□□ -0.59
SF3B3-205ENST00000564899 BYSLQ13895 437 aaKnown RBP11.38□□□□□ -0.59
SF3B3-205ENST00000564899 RSPO4Q2I0M5 234 aaPredicted RBP11.38□□□□□ -0.59
SF3B3-205ENST00000564899 C5orf22Q49AR2 442 aa11.38□□□□□ -0.59
SF3B3-205ENST00000564899 ALFQ53S48 1182 aa11.38□□□□□ -0.59
SF3B3-205ENST00000564899 FAM78AQ5JUQ0 283 aa11.38□□□□□ -0.59
SF3B3-205ENST00000564899 TTC39BQ5VTQ0 682 aaPredicted RBP11.38□□□□□ -0.59
SF3B3-205ENST00000564899 TFAP2DQ7Z6R9 452 aa11.38□□□□□ -0.59
SF3B3-205ENST00000564899 ZC3H18Q86VM9 953 aaKnown RBP11.38□□□□□ -0.59
SF3B3-205ENST00000564899 NLRP14Q86W24 1093 aa11.38□□□□□ -0.59
SF3B3-205ENST00000564899 CIR1Q86X95 450 aaPredicted RBP11.38□□□□□ -0.59
SF3B3-205ENST00000564899 FAM217AQ8IXS0 508 aa11.38□□□□□ -0.59
SF3B3-205ENST00000564899 CELF5Q8N6W0 485 aaKnown RBP11.38□□□□□ -0.59
SF3B3-205ENST00000564899 NPWQ8N729 165 aa11.38□□□□□ -0.59
SF3B3-205ENST00000564899 SUMF1Q8NBK3 374 aa11.38□□□□□ -0.59
SF3B3-205ENST00000564899 HJURPQ8NCD3 748 aaPredicted RBP11.38□□□□□ -0.59
SF3B3-205ENST00000564899 MYRIPQ8NFW9 859 aa11.38□□□□□ -0.59
SF3B3-205ENST00000564899 CCDC26Q8TAB7 109 aa11.38□□□□□ -0.59
SF3B3-205ENST00000564899 RIN3Q8TB24 985 aa11.38□□□□□ -0.59
SF3B3-205ENST00000564899 UBXN4Q92575 508 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms