RNA–Protein interactions for RNA: ENST00000564342.5

NSMCE1-207, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-207ENST00000564342 SEPT11Q9NVA2 429 aaKnown RBP8.48□□□□□ -1.05
NSMCE1-207ENST00000564342 TMEM51Q9NW97 253 aa8.48□□□□□ -1.05
NSMCE1-207ENST00000564342 ADAM22Q9P0K1 906 aa8.48□□□□□ -1.05
NSMCE1-207ENST00000564342 USP36Q9P275 1121 aaKnown RBP8.48□□□□□ -1.05
NSMCE1-207ENST00000564342 PLA2G4CQ9UP65 541 aa8.48□□□□□ -1.05
NSMCE1-207ENST00000564342 ERVW-1Q9UQF0 538 aa8.48□□□□□ -1.05
NSMCE1-207ENST00000564342 PAXBP1Q9Y5B6 917 aa8.48□□□□□ -1.05
NSMCE1-207ENST00000564342 SNX10Q9Y5X0 201 aa8.48□□□□□ -1.05
NSMCE1-207ENST00000564342 ITIH6Q6UXX5 1313 aa8.48□□□□□ -1.05
NSMCE1-207ENST00000564342 CEP250Q9BV73 2442 aa8.48□□□□□ -1.05
NSMCE1-207ENST00000564342 CACNA1EQ15878 2313 aa8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 ADAMTS9Q9P2N4 1935 aa8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 CFAP54Q96N23 3096 aa8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 DRGXA6NNA5 263 aa8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 AP5Z1O43299 807 aa8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 GDF9O60383 454 aa8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 CNTN5O94779 1100 aa8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 MOCS3O95396 460 aa8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 IGLV3-19P01714 112 aa8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 CALB1P05937 261 aa8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 SRPRAP08240 638 aaKnown RBP8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 KRT3P12035 628 aa8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 PDGFRAP16234 1089 aa8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 MZF1P28698 734 aaPredicted RBP8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 SDC4P31431 198 aa8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 RFC1P35251 1148 aaPredicted RBP8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 PBX1P40424 430 aa8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 PRKCIP41743 596 aa8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 PTPN9P43378 593 aa8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 TPM4P67936 248 aa8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 ATP11AP98196 1134 aa8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 RPL6Q02878 288 aaKnown RBP8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 ASIC2Q16515 512 aa8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 CDO1Q16878 200 aa8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 CCDC14Q49A88 953 aa8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 ALFQ53S48 1182 aa8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 FIGNQ5HY92 759 aa8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 PPP1R15BQ5SWA1 713 aa8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 SH3PXD2AQ5TCZ1 1133 aa8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 PEAR1Q5VY43 1037 aaPredicted RBP8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 TCEAL6Q6IPX3 200 aa8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 ACAD10Q6JQN1 1059 aa8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 STRADAQ7RTN6 431 aa8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 CYP2U1Q7Z449 544 aa8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 FAM131BQ86XD5 332 aa8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 CACUL1Q86Y37 369 aa8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 SLC41A1Q8IVJ1 513 aa8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 DEFB119Q8N690 84 aa8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 KDM1BQ8NB78 822 aa8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 C3orf20Q8ND61 904 aa8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 PIGKQ92643 395 aa8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 CENPIQ92674 756 aaPredicted RBP8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 PRCCQ92733 491 aaPredicted RBP8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 TCEAL3Q969E4 200 aa8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 SIPA1Q96FS4 1042 aa8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 C1orf74Q96LT6 269 aa8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 SELENOOQ9BVL4 669 aa8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 EDEM3Q9BZQ6 932 aa8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 RXFP3Q9NSD7 469 aa8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 TMEM74BQ9NUR3 256 aa8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 WSB2Q9NYS7 404 aaPredicted RBP8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 AIPL1Q9NZN9 384 aa8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 SUN2Q9UH99 717 aa8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 TBC1D30Q9Y2I9 924 aa8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 OR51B4Q9Y5P0 310 aa8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 ATXN2Q99700 1313 aaKnown RBP8.47□□□□□ -1.05
NSMCE1-207ENST00000564342 TP53BP1Q12888 1972 aaPredicted RBP8.46□□□□□ -1.05
NSMCE1-207ENST00000564342 PCDH15Q96QU1 1955 aa8.46□□□□□ -1.05
NSMCE1-207ENST00000564342 CNOT1A5YKK6 2376 aaKnown RBP8.46□□□□□ -1.06
NSMCE1-207ENST00000564342 IGLV3-10A0A075B6K4 115 aa8.46□□□□□ -1.06
NSMCE1-207ENST00000564342 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.46□□□□□ -1.06
NSMCE1-207ENST00000564342 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.46□□□□□ -1.06
NSMCE1-207ENST00000564342 SIGLEC16A6NMB1 481 aa8.46□□□□□ -1.06
NSMCE1-207ENST00000564342 PATE3B3GLJ2 98 aa8.46□□□□□ -1.06
NSMCE1-207ENST00000564342 E9PAM4 449 aa8.46□□□□□ -1.06
NSMCE1-207ENST00000564342 GOLGA6L19H0YKK7 550 aa8.46□□□□□ -1.06
NSMCE1-207ENST00000564342 SIN3BO75182 1162 aa8.46□□□□□ -1.06
NSMCE1-207ENST00000564342 CLDN11O75508 207 aa8.46□□□□□ -1.06
NSMCE1-207ENST00000564342 TNFAIP3P21580 790 aa8.46□□□□□ -1.06
NSMCE1-207ENST00000564342 GPD1P21695 349 aa8.46□□□□□ -1.06
NSMCE1-207ENST00000564342 RRM1P23921 792 aa8.46□□□□□ -1.06
NSMCE1-207ENST00000564342 CD6P30203 668 aa8.46□□□□□ -1.06
NSMCE1-207ENST00000564342 NUMBP49757 651 aa8.46□□□□□ -1.06
NSMCE1-207ENST00000564342 STK19P49842 368 aaPredicted RBP8.46□□□□□ -1.06
NSMCE1-207ENST00000564342 TPMTP51580 245 aa8.46□□□□□ -1.06
NSMCE1-207ENST00000564342 CDH4P55283 916 aa8.46□□□□□ -1.06
NSMCE1-207ENST00000564342 OXCT1P55809 520 aa8.46□□□□□ -1.06
NSMCE1-207ENST00000564342 HDAC4P56524 1084 aa8.46□□□□□ -1.06
NSMCE1-207ENST00000564342 UBASH3AP57075 661 aa8.46□□□□□ -1.06
NSMCE1-207ENST00000564342 ST8SIA6P61647 398 aa8.46□□□□□ -1.06
NSMCE1-207ENST00000564342 RPS14P62263 151 aaKnown RBP8.46□□□□□ -1.06
NSMCE1-207ENST00000564342 ECT2LQ008S8 904 aa8.46□□□□□ -1.06
NSMCE1-207ENST00000564342 ZNF33AQ06730 810 aa8.46□□□□□ -1.06
NSMCE1-207ENST00000564342 ZNF177Q13360 481 aaPredicted RBP8.46□□□□□ -1.06
NSMCE1-207ENST00000564342 PUM1Q14671 1186 aaKnown RBP eCLIP8.46□□□□□ -1.06
NSMCE1-207ENST00000564342 ARID5BQ14865 1188 aa8.46□□□□□ -1.06
NSMCE1-207ENST00000564342 HNRNPA1L2Q32P51 320 aaKnown RBP8.46□□□□□ -1.06
NSMCE1-207ENST00000564342 AASDHQ4L235 1098 aaPredicted RBP8.46□□□□□ -1.06
NSMCE1-207ENST00000564342 ACBD5Q5T8D3 534 aaPredicted RBP8.46□□□□□ -1.06
NSMCE1-207ENST00000564342 SFMBT2Q5VUG0 894 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms