RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 CHSY3Q70JA7 882 aa12.61□□□□□ -0.39
SCAMP2-204ENST00000563829 OFCC1Q8IZS5 231 aa12.61□□□□□ -0.39
SCAMP2-204ENST00000563829 TMEM35BQ8NCS4 154 aa12.61□□□□□ -0.39
SCAMP2-204ENST00000563829 GABPB2Q8TAK5 448 aaPredicted RBP12.61□□□□□ -0.39
SCAMP2-204ENST00000563829 TFAP2CQ92754 450 aa12.61□□□□□ -0.39
SCAMP2-204ENST00000563829 EBNA1BP2Q99848 306 aaKnown RBP12.61□□□□□ -0.39
SCAMP2-204ENST00000563829 VTA1Q9NP79 307 aa12.61□□□□□ -0.39
SCAMP2-204ENST00000563829 TRPV5Q9NQA5 729 aa12.61□□□□□ -0.39
SCAMP2-204ENST00000563829 H0YJX3 145 aa12.61□□□□□ -0.39
SCAMP2-204ENST00000563829 CLASP2O75122 1294 aaKnown RBP12.61□□□□□ -0.39
SCAMP2-204ENST00000563829 GMNNO75496 209 aa12.61□□□□□ -0.39
SCAMP2-204ENST00000563829 CCNA2P20248 432 aa12.61□□□□□ -0.39
SCAMP2-204ENST00000563829 MPSTP25325 297 aa12.61□□□□□ -0.39
SCAMP2-204ENST00000563829 EPHX2P34913 555 aa12.61□□□□□ -0.39
SCAMP2-204ENST00000563829 CDH6P55285 790 aa12.61□□□□□ -0.39
SCAMP2-204ENST00000563829 ARPC4P59998 168 aa12.61□□□□□ -0.39
SCAMP2-204ENST00000563829 PGS1Q32NB8 556 aa12.61□□□□□ -0.39
SCAMP2-204ENST00000563829 EML3Q32P44 896 aa12.61□□□□□ -0.39
SCAMP2-204ENST00000563829 HMBOX1Q6NT76 420 aa12.61□□□□□ -0.39
SCAMP2-204ENST00000563829 VASH1Q7L8A9 365 aaPredicted RBP12.61□□□□□ -0.39
SCAMP2-204ENST00000563829 SIAH1Q8IUQ4 282 aa12.61□□□□□ -0.39
SCAMP2-204ENST00000563829 ZNF420Q8TAQ5 688 aaPredicted RBP12.61□□□□□ -0.39
SCAMP2-204ENST00000563829 FAM110BQ8TC76 370 aa12.61□□□□□ -0.39
SCAMP2-204ENST00000563829 FBXL18Q96ME1 805 aa12.61□□□□□ -0.39
SCAMP2-204ENST00000563829 APBA2Q99767 749 aa12.61□□□□□ -0.39
SCAMP2-204ENST00000563829 MXRA8Q9BRK3 442 aa12.61□□□□□ -0.39
SCAMP2-204ENST00000563829 CPQQ9Y646 472 aa12.61□□□□□ -0.39
SCAMP2-204ENST00000563829 DYNC1LI2O43237 492 aaPredicted RBP12.6□□□□□ -0.39
SCAMP2-204ENST00000563829 TPST1O60507 370 aa12.6□□□□□ -0.39
SCAMP2-204ENST00000563829 TFE3P19532 575 aaPredicted RBP12.6□□□□□ -0.39
SCAMP2-204ENST00000563829 GRIA3P42263 894 aa12.6□□□□□ -0.39
SCAMP2-204ENST00000563829 CSE1LP55060 971 aaKnown RBP12.6□□□□□ -0.39
SCAMP2-204ENST00000563829 DNASE1L3Q13609 305 aa12.6□□□□□ -0.39
SCAMP2-204ENST00000563829 UGCGQ16739 394 aa12.6□□□□□ -0.39
SCAMP2-204ENST00000563829 FAM47CQ5HY64 1035 aa12.6□□□□□ -0.39
SCAMP2-204ENST00000563829 C15orf39Q6ZRI6 1047 aa12.6□□□□□ -0.39
SCAMP2-204ENST00000563829 UTS2BQ765I0 119 aa12.6□□□□□ -0.39
SCAMP2-204ENST00000563829 Q8N9G6 341 aaPredicted RBP12.6□□□□□ -0.39
SCAMP2-204ENST00000563829 BSNDQ8WZ55 320 aa12.6□□□□□ -0.39
SCAMP2-204ENST00000563829 LPGAT1Q92604 370 aa12.6□□□□□ -0.39
SCAMP2-204ENST00000563829 SIGLEC10Q96LC7 697 aa12.6□□□□□ -0.39
SCAMP2-204ENST00000563829 PALMDQ9NP74 551 aa12.6□□□□□ -0.39
SCAMP2-204ENST00000563829 RIC8BQ9NVN3 520 aa12.6□□□□□ -0.39
SCAMP2-204ENST00000563829 NXF1Q9UBU9 619 aaKnown RBP12.6□□□□□ -0.39
SCAMP2-204ENST00000563829 VPS28Q9UK41 221 aa12.6□□□□□ -0.39
SCAMP2-204ENST00000563829 PRR12Q9ULL5 1215 aa12.6□□□□□ -0.39
SCAMP2-204ENST00000563829 WDR27A2RRH5 827 aa12.6□□□□□ -0.39
SCAMP2-204ENST00000563829 FAM149AA5PLN7 773 aa12.6□□□□□ -0.39
SCAMP2-204ENST00000563829 TRIM38O00635 465 aa12.6□□□□□ -0.39
SCAMP2-204ENST00000563829 NRP1O14786 923 aa12.6□□□□□ -0.39
SCAMP2-204ENST00000563829 SNAP91O60641 907 aa12.6□□□□□ -0.39
SCAMP2-204ENST00000563829 MYO1DO94832 1006 aa12.6□□□□□ -0.39
SCAMP2-204ENST00000563829 C4BPAP04003 597 aaKnown RBP12.6□□□□□ -0.39
SCAMP2-204ENST00000563829 MIPP30301 263 aa12.6□□□□□ -0.39
SCAMP2-204ENST00000563829 MLLT10P55197 1068 aa12.6□□□□□ -0.39
SCAMP2-204ENST00000563829 TPTEP56180 551 aa12.6□□□□□ -0.39
SCAMP2-204ENST00000563829 PRKCQQ04759 706 aa12.6□□□□□ -0.39
SCAMP2-204ENST00000563829 TRIM25Q14258 630 aaKnown RBP12.6□□□□□ -0.39
SCAMP2-204ENST00000563829 NOMO1Q15155 1222 aa12.6□□□□□ -0.39
SCAMP2-204ENST00000563829 CARTPTQ16568 116 aa12.6□□□□□ -0.39
SCAMP2-204ENST00000563829 TIGD2Q4W5G0 525 aa12.6□□□□□ -0.39
SCAMP2-204ENST00000563829 TIFABQ6ZNK6 161 aa12.6□□□□□ -0.39
SCAMP2-204ENST00000563829 TTC30AQ86WT1 665 aa12.6□□□□□ -0.39
SCAMP2-204ENST00000563829 CBR4Q8N4T8 237 aa12.6□□□□□ -0.39
SCAMP2-204ENST00000563829 SLCO4A1Q96BD0 722 aa12.6□□□□□ -0.39
SCAMP2-204ENST00000563829 ASB9Q96DX5 294 aa12.6□□□□□ -0.39
SCAMP2-204ENST00000563829 C1orf50Q9BV19 199 aa12.6□□□□□ -0.39
SCAMP2-204ENST00000563829 CEP44Q9C0F1 390 aa12.6□□□□□ -0.39
SCAMP2-204ENST00000563829 ST6GALNAC4Q9H4F1 302 aa12.6□□□□□ -0.39
SCAMP2-204ENST00000563829 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.6□□□□□ -0.39
SCAMP2-204ENST00000563829 SLC27A5Q9Y2P5 690 aa12.6□□□□□ -0.39
SCAMP2-204ENST00000563829 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 ZNF839A8K0R7 811 aa12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 C9IYK1 514 aa12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 LIG4P49917 911 aa12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 RHDQ02161 417 aa12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 WDTC1Q8N5D0 677 aa12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 NIPA2Q8N8Q9 360 aa12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 FBXL20Q96IG2 436 aa12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 OLFM1Q99784 485 aa12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 KCNH7Q9NS40 1196 aa12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 CNOT6Q9ULM6 557 aaKnown RBP12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 RNF103-CHMP3A0A140T963 221 aa12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 SPDYE2BA6NHP3 402 aa12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 SPDYE6P0CI01 402 aa12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 ITGB5P18084 799 aa12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 MATN1P21941 496 aa12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 NKX2-5P52952 324 aaPredicted RBP12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 SPP2Q13103 211 aa12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 BFSP2Q13515 415 aa12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 SPDYE2Q495Y8 402 aa12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 STXBP5Q5T5C0 1151 aa12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 RSBN1LQ6PCB5 846 aaPredicted RBP12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 MAMDC4Q6UXC1 1216 aa12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 BRINP3Q76B58 766 aa12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 HACE1Q8IYU2 909 aa12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 PLD6Q8N2A8 252 aaKnown RBP12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 BPIFB6Q8NFQ5 453 aa12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 TNIP2Q8NFZ5 429 aa12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 SREK1Q8WXA9 508 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms