RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 OVCA2Q8WZ82 227 aa5.56□□□□□ -1.52
LINC00254-201ENST00000563416 NAP1L4Q99733 375 aaKnown RBP5.56□□□□□ -1.52
LINC00254-201ENST00000563416 ELAC2Q9BQ52 826 aaKnown RBP5.56□□□□□ -1.52
LINC00254-201ENST00000563416 QTRT1Q9BXR0 403 aaKnown RBP5.56□□□□□ -1.52
LINC00254-201ENST00000563416 PNNQ9H307 717 aaKnown RBP5.56□□□□□ -1.52
LINC00254-201ENST00000563416 VPS45Q9NRW7 570 aa5.56□□□□□ -1.52
LINC00254-201ENST00000563416 RXFP3Q9NSD7 469 aa5.56□□□□□ -1.52
LINC00254-201ENST00000563416 PI4KBQ9UBF8 816 aa5.56□□□□□ -1.52
LINC00254-201ENST00000563416 GOLGB1Q14789 3259 aaKnown RBP5.56□□□□□ -1.52
LINC00254-201ENST00000563416 CCDC88AQ3V6T2 1871 aa5.56□□□□□ -1.52
LINC00254-201ENST00000563416 LAMB2P55268 1798 aa5.55□□□□□ -1.52
LINC00254-201ENST00000563416 MAPK8IP3Q9UPT6 1336 aa5.55□□□□□ -1.52
LINC00254-201ENST00000563416 CYP2D7A0A087X1C5 515 aa5.55□□□□□ -1.52
LINC00254-201ENST00000563416 WDR91A4D1P6 747 aa5.55□□□□□ -1.52
LINC00254-201ENST00000563416 TTC34A8MYJ7 566 aa5.55□□□□□ -1.52
LINC00254-201ENST00000563416 PRAMEF2O60811 474 aa5.55□□□□□ -1.52
LINC00254-201ENST00000563416 CBFA2T3O75081 653 aa5.55□□□□□ -1.52
LINC00254-201ENST00000563416 SLC3A2P08195 630 aaKnown RBP5.55□□□□□ -1.52
LINC00254-201ENST00000563416 SRGAP2BP0DMP2 458 aa5.55□□□□□ -1.52
LINC00254-201ENST00000563416 PECAM1P16284 738 aaPredicted RBP5.55□□□□□ -1.52
LINC00254-201ENST00000563416 ATF7P17544 494 aaPredicted RBP5.55□□□□□ -1.52
LINC00254-201ENST00000563416 MATN1P21941 496 aa5.55□□□□□ -1.52
LINC00254-201ENST00000563416 TACR3P29371 465 aa5.55□□□□□ -1.52
LINC00254-201ENST00000563416 GALNSP34059 522 aa5.55□□□□□ -1.52
LINC00254-201ENST00000563416 ARHGAP25P42331 645 aa5.55□□□□□ -1.52
LINC00254-201ENST00000563416 HSPA7P48741 367 aa5.55□□□□□ -1.52
LINC00254-201ENST00000563416 SSBP2P81877 361 aaPredicted RBP5.55□□□□□ -1.52
LINC00254-201ENST00000563416 SEMA3BQ13214 749 aa5.55□□□□□ -1.52
LINC00254-201ENST00000563416 SUPT20HL1Q3ZLR7 823 aa5.55□□□□□ -1.52
LINC00254-201ENST00000563416 ARHGAP15Q53QZ3 475 aa5.55□□□□□ -1.52
LINC00254-201ENST00000563416 TMEM196Q5HYL7 178 aa5.55□□□□□ -1.52
LINC00254-201ENST00000563416 DGKKQ5KSL6 1271 aa5.55□□□□□ -1.52
LINC00254-201ENST00000563416 SKAP1Q86WV1 359 aa5.55□□□□□ -1.52
LINC00254-201ENST00000563416 RASGRP3Q8IV61 690 aa5.55□□□□□ -1.52
LINC00254-201ENST00000563416 CLASRPQ8N2M8 674 aaKnown RBP5.55□□□□□ -1.52
LINC00254-201ENST00000563416 ZNF398Q8TD17 642 aa5.55□□□□□ -1.52
LINC00254-201ENST00000563416 SMG7Q92540 1137 aaKnown RBP5.55□□□□□ -1.52
LINC00254-201ENST00000563416 CUL5Q93034 780 aa5.55□□□□□ -1.52
LINC00254-201ENST00000563416 GJA10Q969M2 543 aa5.55□□□□□ -1.52
LINC00254-201ENST00000563416 RPL36ALQ969Q0 106 aaKnown RBP5.55□□□□□ -1.52
LINC00254-201ENST00000563416 SGCZQ96LD1 299 aa5.55□□□□□ -1.52
LINC00254-201ENST00000563416 GDF15Q99988 308 aa5.55□□□□□ -1.52
LINC00254-201ENST00000563416 RNF26Q9BY78 433 aaPredicted RBP5.55□□□□□ -1.52
LINC00254-201ENST00000563416 PRSS22Q9GZN4 317 aa5.55□□□□□ -1.52
LINC00254-201ENST00000563416 SAP30LQ9HAJ7 183 aa5.55□□□□□ -1.52
LINC00254-201ENST00000563416 ARFGAP3Q9NP61 516 aa5.55□□□□□ -1.52
LINC00254-201ENST00000563416 HELLSQ9NRZ9 838 aa5.55□□□□□ -1.52
LINC00254-201ENST00000563416 ARL8BQ9NVJ2 186 aa5.55□□□□□ -1.52
LINC00254-201ENST00000563416 KLHL13Q9P2N7 655 aa5.55□□□□□ -1.52
LINC00254-201ENST00000563416 ZNF70Q9UC06 446 aaPredicted RBP5.55□□□□□ -1.52
LINC00254-201ENST00000563416 SCAF8Q9UPN6 1271 aaKnown RBP5.55□□□□□ -1.52
LINC00254-201ENST00000563416 HEG1Q9ULI3 1381 aa5.55□□□□□ -1.52
LINC00254-201ENST00000563416 MYH3P11055 1940 aa5.54□□□□□ -1.52
LINC00254-201ENST00000563416 KCNU1A8MYU2 1149 aa5.54□□□□□ -1.52
LINC00254-201ENST00000563416 ANP32CO43423 234 aa5.54□□□□□ -1.52
LINC00254-201ENST00000563416 BCAR3O75815 825 aa5.54□□□□□ -1.52
LINC00254-201ENST00000563416 GLP2RO95838 553 aa5.54□□□□□ -1.52
LINC00254-201ENST00000563416 DUSP1P28562 367 aa5.54□□□□□ -1.52
LINC00254-201ENST00000563416 IGHMBP2P38935 993 aaKnown RBP5.54□□□□□ -1.52
LINC00254-201ENST00000563416 TMPOP42166 694 aaKnown RBP5.54□□□□□ -1.52
LINC00254-201ENST00000563416 MMP13P45452 471 aa5.54□□□□□ -1.52
LINC00254-201ENST00000563416 WDR5P61964 334 aaKnown RBP5.54□□□□□ -1.52
LINC00254-201ENST00000563416 GHRHRQ02643 423 aa5.54□□□□□ -1.52
LINC00254-201ENST00000563416 TEFQ10587 303 aa5.54□□□□□ -1.52
LINC00254-201ENST00000563416 SLC39A6Q13433 755 aa5.54□□□□□ -1.52
LINC00254-201ENST00000563416 WDR43Q15061 677 aaKnown RBP eCLIP5.54□□□□□ -1.52
LINC00254-201ENST00000563416 TRIP6Q15654 476 aaKnown RBP5.54□□□□□ -1.52
LINC00254-201ENST00000563416 MPEG1Q2M385 716 aa5.54□□□□□ -1.52
LINC00254-201ENST00000563416 P3H1Q32P28 736 aa5.54□□□□□ -1.52
LINC00254-201ENST00000563416 CCDC184Q52MB2 194 aa5.54□□□□□ -1.52
LINC00254-201ENST00000563416 INO80DQ53TQ3 878 aaPredicted RBP5.54□□□□□ -1.52
LINC00254-201ENST00000563416 AWAT1Q58HT5 328 aa5.54□□□□□ -1.52
LINC00254-201ENST00000563416 FAM90A2PQ658T7 463 aa5.54□□□□□ -1.52
LINC00254-201ENST00000563416 ZNF790Q6PG37 636 aa5.54□□□□□ -1.52
LINC00254-201ENST00000563416 MCM10Q7L590 875 aa5.54□□□□□ -1.52
LINC00254-201ENST00000563416 PRSS3P2Q8NHM4 247 aa5.54□□□□□ -1.52
LINC00254-201ENST00000563416 DENND1AQ8TEH3 1009 aa5.54□□□□□ -1.52
LINC00254-201ENST00000563416 KIAA1191Q96A73 305 aa5.54□□□□□ -1.52
LINC00254-201ENST00000563416 KAZALD1Q96I82 304 aa5.54□□□□□ -1.52
LINC00254-201ENST00000563416 NUAK2Q9H093 628 aa5.54□□□□□ -1.52
LINC00254-201ENST00000563416 PCDHGB2Q9Y5G2 931 aa5.54□□□□□ -1.52
LINC00254-201ENST00000563416 SBF1O95248 1867 aa5.54□□□□□ -1.52
LINC00254-201ENST00000563416 DICER1Q9UPY3 1922 aaKnown RBP5.53□□□□□ -1.52
LINC00254-201ENST00000563416 USP12O75317 370 aa5.53□□□□□ -1.52
LINC00254-201ENST00000563416 WDHD1O75717 1129 aaPredicted RBP5.53□□□□□ -1.52
LINC00254-201ENST00000563416 TCEA3O75764 348 aa5.53□□□□□ -1.52
LINC00254-201ENST00000563416 LMO1P25800 156 aa5.53□□□□□ -1.52
LINC00254-201ENST00000563416 ZNF81P51508 661 aa5.53□□□□□ -1.52
LINC00254-201ENST00000563416 RAE1P78406 368 aaKnown RBP5.53□□□□□ -1.52
LINC00254-201ENST00000563416 SLC14A1Q13336 389 aa5.53□□□□□ -1.52
LINC00254-201ENST00000563416 DCTN1Q14203 1278 aa5.53□□□□□ -1.52
LINC00254-201ENST00000563416 CSHL1Q14406 222 aa5.53□□□□□ -1.52
LINC00254-201ENST00000563416 DAZAP2Q15038 168 aaPredicted RBP5.53□□□□□ -1.52
LINC00254-201ENST00000563416 RAB30Q15771 203 aa5.53□□□□□ -1.52
LINC00254-201ENST00000563416 CNGA3Q16281 694 aa5.53□□□□□ -1.52
LINC00254-201ENST00000563416 FAM110CQ1W6H9 321 aa5.53□□□□□ -1.52
LINC00254-201ENST00000563416 TMEM95Q3KNT9 176 aa5.53□□□□□ -1.52
LINC00254-201ENST00000563416 TMTC4Q5T4D3 741 aa5.53□□□□□ -1.52
LINC00254-201ENST00000563416 CCDC144NLQ6NUI1 221 aa5.53□□□□□ -1.52
LINC00254-201ENST00000563416 TOGARAM2Q6ZUX3 1019 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms