RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 TMEM110Q86TL2 294 aa17.35■□□□□ 0.37
HDGFL3-203ENST00000563404 ZNF606Q8WXB4 792 aa17.35■□□□□ 0.37
HDGFL3-203ENST00000563404 BTN2A3PQ96KV6 586 aa17.35■□□□□ 0.37
HDGFL3-203ENST00000563404 PRMT1Q99873 361 aaKnown RBP17.35■□□□□ 0.37
HDGFL3-203ENST00000563404 POPDC2Q9HBU9 364 aa17.35■□□□□ 0.37
HDGFL3-203ENST00000563404 FTSJ1Q9UET6 329 aa17.35■□□□□ 0.37
HDGFL3-203ENST00000563404 NYNRINQ9P2P1 1898 aaKnown RBP17.35■□□□□ 0.37
HDGFL3-203ENST00000563404 PLK4O00444 970 aa17.34■□□□□ 0.37
HDGFL3-203ENST00000563404 CAPN9O14815 690 aa17.34■□□□□ 0.37
HDGFL3-203ENST00000563404 LETM1O95202 739 aaPredicted RBP17.34■□□□□ 0.37
HDGFL3-203ENST00000563404 MOCS3O95396 460 aa17.34■□□□□ 0.37
HDGFL3-203ENST00000563404 APOEP02649 317 aa17.34■□□□□ 0.37
HDGFL3-203ENST00000563404 AFPP02771 609 aaKnown RBP17.34■□□□□ 0.37
HDGFL3-203ENST00000563404 PDGFRAP16234 1089 aa17.34■□□□□ 0.37
HDGFL3-203ENST00000563404 GOT1P17174 413 aa17.34■□□□□ 0.37
HDGFL3-203ENST00000563404 CD38P28907 300 aa17.34■□□□□ 0.37
HDGFL3-203ENST00000563404 DRD3P35462 400 aa17.34■□□□□ 0.37
HDGFL3-203ENST00000563404 PPP1R2P41236 205 aa17.34■□□□□ 0.37
HDGFL3-203ENST00000563404 MARSP56192 900 aaKnown RBP17.34■□□□□ 0.37
HDGFL3-203ENST00000563404 YWHAZP63104 245 aaKnown RBP17.34■□□□□ 0.37
HDGFL3-203ENST00000563404 GJB7Q6PEY0 223 aa17.34■□□□□ 0.37
HDGFL3-203ENST00000563404 CCDC117Q8IWD4 279 aaPredicted RBP17.34■□□□□ 0.37
HDGFL3-203ENST00000563404 OR14C36Q8NHC7 312 aa17.34■□□□□ 0.37
HDGFL3-203ENST00000563404 SAP25Q8TEE9 199 aa17.34■□□□□ 0.37
HDGFL3-203ENST00000563404 FRS2Q8WU20 508 aa17.34■□□□□ 0.37
HDGFL3-203ENST00000563404 UBE2TQ9NPD8 197 aaPredicted RBP17.34■□□□□ 0.37
HDGFL3-203ENST00000563404 AASDHPPTQ9NRN7 309 aa17.34■□□□□ 0.37
HDGFL3-203ENST00000563404 HOOK1Q9UJC3 728 aaKnown RBP17.34■□□□□ 0.37
HDGFL3-203ENST00000563404 CEP83Q9Y592 693 aa17.34■□□□□ 0.37
HDGFL3-203ENST00000563404 COL5A1P20908 1838 aaPredicted RBP17.33■□□□□ 0.37
HDGFL3-203ENST00000563404 KCNU1A8MYU2 1149 aa17.33■□□□□ 0.36
HDGFL3-203ENST00000563404 BIN1O00499 593 aa17.33■□□□□ 0.36
HDGFL3-203ENST00000563404 ADH1BP00325 375 aa17.33■□□□□ 0.36
HDGFL3-203ENST00000563404 C5AR1P21730 350 aa17.33■□□□□ 0.36
HDGFL3-203ENST00000563404 SFSWAPQ12872 951 aaKnown RBP17.33■□□□□ 0.36
HDGFL3-203ENST00000563404 DNAJC3Q13217 504 aa17.33■□□□□ 0.36
HDGFL3-203ENST00000563404 PDCLQ13371 301 aa17.33■□□□□ 0.36
HDGFL3-203ENST00000563404 ACAP1Q15027 740 aa17.33■□□□□ 0.36
HDGFL3-203ENST00000563404 MEA1Q16626 185 aa17.33■□□□□ 0.36
HDGFL3-203ENST00000563404 CXorf57Q6NSI4 855 aaKnown RBP17.33■□□□□ 0.36
HDGFL3-203ENST00000563404 SND1Q7KZF4 910 aaKnown RBP eCLIP17.33■□□□□ 0.36
HDGFL3-203ENST00000563404 CCAR2Q8N163 923 aaKnown RBP17.33■□□□□ 0.36
HDGFL3-203ENST00000563404 WDTC1Q8N5D0 677 aa17.33■□□□□ 0.36
HDGFL3-203ENST00000563404 OR52K2Q8NGK3 314 aa17.33■□□□□ 0.36
HDGFL3-203ENST00000563404 FAM131CQ96AQ9 280 aa17.33■□□□□ 0.36
HDGFL3-203ENST00000563404 SRRTQ9BXP5 876 aaKnown RBP17.33■□□□□ 0.36
HDGFL3-203ENST00000563404 SCUBE2Q9NQ36 999 aa17.33■□□□□ 0.36
HDGFL3-203ENST00000563404 ARHGAP20Q9P2F6 1191 aa17.33■□□□□ 0.36
HDGFL3-203ENST00000563404 SARDHQ9UL12 918 aa17.33■□□□□ 0.36
HDGFL3-203ENST00000563404 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.33■□□□□ 0.36
HDGFL3-203ENST00000563404 URB1O60287 2271 aaKnown RBP17.32■□□□□ 0.36
HDGFL3-203ENST00000563404 BECN2A8MW95 431 aa17.32■□□□□ 0.36
HDGFL3-203ENST00000563404 F5H5T6 163 aa17.32■□□□□ 0.36
HDGFL3-203ENST00000563404 ENC1O14682 589 aa17.32■□□□□ 0.36
HDGFL3-203ENST00000563404 THAP12O43422 761 aa17.32■□□□□ 0.36
HDGFL3-203ENST00000563404 LATO43561 262 aa17.32■□□□□ 0.36
HDGFL3-203ENST00000563404 IL1BP01584 269 aa17.32■□□□□ 0.36
HDGFL3-203ENST00000563404 GNA15P30679 374 aa17.32■□□□□ 0.36
HDGFL3-203ENST00000563404 IRAK1P51617 712 aa17.32■□□□□ 0.36
HDGFL3-203ENST00000563404 PLK1P53350 603 aa17.32■□□□□ 0.36
HDGFL3-203ENST00000563404 NXPH1P58417 271 aa17.32■□□□□ 0.36
HDGFL3-203ENST00000563404 APBA1Q02410 837 aa17.32■□□□□ 0.36
HDGFL3-203ENST00000563404 BNIP3Q12983 259 aa17.32■□□□□ 0.36
HDGFL3-203ENST00000563404 ELAVL3Q14576 367 aaKnown RBP17.32■□□□□ 0.36
HDGFL3-203ENST00000563404 INAVAQ3KP66 663 aa17.32■□□□□ 0.36
HDGFL3-203ENST00000563404 RNF219Q5W0B1 726 aaPredicted RBP17.32■□□□□ 0.36
HDGFL3-203ENST00000563404 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.32■□□□□ 0.36
HDGFL3-203ENST00000563404 SPATS2Q86XZ4 545 aaKnown RBP17.32■□□□□ 0.36
HDGFL3-203ENST00000563404 PDCD7Q8N8D1 485 aaKnown RBP17.32■□□□□ 0.36
HDGFL3-203ENST00000563404 ALG14Q96F25 216 aa17.32■□□□□ 0.36
HDGFL3-203ENST00000563404 CRELD1Q96HD1 420 aa17.32■□□□□ 0.36
HDGFL3-203ENST00000563404 SERAC1Q96JX3 654 aa17.32■□□□□ 0.36
HDGFL3-203ENST00000563404 CNDP2Q96KP4 475 aaKnown RBP17.32■□□□□ 0.36
HDGFL3-203ENST00000563404 BBC3Q96PG8 261 aaPredicted RBP17.32■□□□□ 0.36
HDGFL3-203ENST00000563404 SLC2A13Q96QE2 648 aa17.32■□□□□ 0.36
HDGFL3-203ENST00000563404 MED15Q96RN5 788 aa17.32■□□□□ 0.36
HDGFL3-203ENST00000563404 TRIM62Q9BVG3 475 aa17.32■□□□□ 0.36
HDGFL3-203ENST00000563404 THAP9Q9H5L6 903 aa17.32■□□□□ 0.36
HDGFL3-203ENST00000563404 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.32■□□□□ 0.36
HDGFL3-203ENST00000563404 SYNJ2BP-COX16A0A087WUM0 186 aa17.31■□□□□ 0.36
HDGFL3-203ENST00000563404 TBC1D3DA0A087WVF3 549 aa17.31■□□□□ 0.36
HDGFL3-203ENST00000563404 TBC1D3IA0A087WXS9 549 aa17.31■□□□□ 0.36
HDGFL3-203ENST00000563404 TBC1D3EA0A087X179 549 aa17.31■□□□□ 0.36
HDGFL3-203ENST00000563404 TBC1D3KA0A087X1G2 549 aa17.31■□□□□ 0.36
HDGFL3-203ENST00000563404 BICDL2A1A5D9 508 aa17.31■□□□□ 0.36
HDGFL3-203ENST00000563404 TBC1D3FA6NER0 549 aaPredicted RBP17.31■□□□□ 0.36
HDGFL3-203ENST00000563404 TBC1D3LB9A6J9 549 aa17.31■□□□□ 0.36
HDGFL3-203ENST00000563404 TLR4O00206 839 aa17.31■□□□□ 0.36
HDGFL3-203ENST00000563404 MED7O43513 233 aa17.31■□□□□ 0.36
HDGFL3-203ENST00000563404 RTN2O75298 545 aa17.31■□□□□ 0.36
HDGFL3-203ENST00000563404 LDOC1O95751 146 aaPredicted RBP17.31■□□□□ 0.36
HDGFL3-203ENST00000563404 GNA14O95837 355 aa17.31■□□□□ 0.36
HDGFL3-203ENST00000563404 ITGAVP06756 1048 aa17.31■□□□□ 0.36
HDGFL3-203ENST00000563404 TBC1D3HP0C7X1 549 aa17.31■□□□□ 0.36
HDGFL3-203ENST00000563404 ABCB4P21439 1286 aa17.31■□□□□ 0.36
HDGFL3-203ENST00000563404 EPHA8P29322 1005 aaPredicted RBP17.31■□□□□ 0.36
HDGFL3-203ENST00000563404 NUCB2P80303 420 aa17.31■□□□□ 0.36
HDGFL3-203ENST00000563404 CENPCQ03188 943 aa17.31■□□□□ 0.36
HDGFL3-203ENST00000563404 SLC12A1Q13621 1099 aa17.31■□□□□ 0.36
HDGFL3-203ENST00000563404 TBC1D3GQ6DHY5 549 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms