RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 GPATCH4Q5T3I0 446 aaKnown RBP3.61□□□□□ -1.83
SHCBP1-202ENST00000563219 MEX3CQ5U5Q3 659 aaKnown RBP3.61□□□□□ -1.83
SHCBP1-202ENST00000563219 MORN5Q5VZ52 161 aa3.61□□□□□ -1.83
SHCBP1-202ENST00000563219 RBM44Q6ZP01 1051 aaKnown RBP3.61□□□□□ -1.83
SHCBP1-202ENST00000563219 TFAP2DQ7Z6R9 452 aa3.61□□□□□ -1.83
SHCBP1-202ENST00000563219 PCGF5Q86SE9 256 aa3.61□□□□□ -1.83
SHCBP1-202ENST00000563219 C16orf71Q8IYS4 520 aaPredicted RBP3.61□□□□□ -1.83
SHCBP1-202ENST00000563219 ADGRF3Q8IZF5 1079 aa3.61□□□□□ -1.83
SHCBP1-202ENST00000563219 GALNT16Q8N428 558 aa3.61□□□□□ -1.83
SHCBP1-202ENST00000563219 TCP11L2Q8N4U5 519 aa3.61□□□□□ -1.83
SHCBP1-202ENST00000563219 PTGR2Q8N8N7 351 aaPredicted RBP3.61□□□□□ -1.83
SHCBP1-202ENST00000563219 CLEC4CQ8WTT0 213 aa3.61□□□□□ -1.83
SHCBP1-202ENST00000563219 MAP4K1Q92918 833 aa3.61□□□□□ -1.83
SHCBP1-202ENST00000563219 RPL36ALQ969Q0 106 aaKnown RBP3.61□□□□□ -1.83
SHCBP1-202ENST00000563219 ZUFSPQ96AP4 578 aa3.61□□□□□ -1.83
SHCBP1-202ENST00000563219 C5orf34Q96MH7 638 aa3.61□□□□□ -1.83
SHCBP1-202ENST00000563219 GPR78Q96P69 363 aa3.61□□□□□ -1.83
SHCBP1-202ENST00000563219 PIGSQ96S52 555 aa3.61□□□□□ -1.83
SHCBP1-202ENST00000563219 HTATIP2Q9BUP3 242 aa3.61□□□□□ -1.83
SHCBP1-202ENST00000563219 TRIM2Q9C040 744 aa3.61□□□□□ -1.83
SHCBP1-202ENST00000563219 SFXN1Q9H9B4 322 aa3.61□□□□□ -1.83
SHCBP1-202ENST00000563219 ERVK-5Q9HDB9 667 aa3.61□□□□□ -1.83
SHCBP1-202ENST00000563219 NRIP3Q9NQ35 241 aa3.61□□□□□ -1.83
SHCBP1-202ENST00000563219 ARL8BQ9NVJ2 186 aa3.61□□□□□ -1.83
SHCBP1-202ENST00000563219 PGAP2Q9UHJ9 254 aa3.61□□□□□ -1.83
SHCBP1-202ENST00000563219 GJD2Q9UKL4 321 aa3.61□□□□□ -1.83
SHCBP1-202ENST00000563219 BAG5Q9UL15 447 aa3.61□□□□□ -1.83
SHCBP1-202ENST00000563219 PCDHA10Q9Y5I2 948 aa3.61□□□□□ -1.83
SHCBP1-202ENST00000563219 AGAP5A6NIR3 686 aa3.6□□□□□ -1.83
SHCBP1-202ENST00000563219 PPP6CO00743 305 aa3.6□□□□□ -1.83
SHCBP1-202ENST00000563219 USP12O75317 370 aa3.6□□□□□ -1.83
SHCBP1-202ENST00000563219 RNASEH2AO75792 299 aaKnown RBP3.6□□□□□ -1.83
SHCBP1-202ENST00000563219 CNTN5O94779 1100 aa3.6□□□□□ -1.83
SHCBP1-202ENST00000563219 TGM2P21980 687 aa3.6□□□□□ -1.83
SHCBP1-202ENST00000563219 EPHB2P29323 1055 aa3.6□□□□□ -1.83
SHCBP1-202ENST00000563219 MPGP29372 298 aa3.6□□□□□ -1.83
SHCBP1-202ENST00000563219 MAN1A1P33908 653 aa3.6□□□□□ -1.83
SHCBP1-202ENST00000563219 PTGER1P34995 402 aa3.6□□□□□ -1.83
SHCBP1-202ENST00000563219 PCP4P48539 62 aa3.6□□□□□ -1.83
SHCBP1-202ENST00000563219 CCR5P51681 352 aa3.6□□□□□ -1.83
SHCBP1-202ENST00000563219 NR1H2P55055 460 aa3.6□□□□□ -1.83
SHCBP1-202ENST00000563219 KLF9Q13886 244 aaPredicted RBP3.6□□□□□ -1.83
SHCBP1-202ENST00000563219 HYIQ5T013 277 aa3.6□□□□□ -1.83
SHCBP1-202ENST00000563219 SLC9C2Q5TAH2 1124 aa3.6□□□□□ -1.83
SHCBP1-202ENST00000563219 ZNF474Q6S9Z5 364 aaPredicted RBP3.6□□□□□ -1.83
SHCBP1-202ENST00000563219 YTHDF3Q7Z739 585 aaKnown RBP3.6□□□□□ -1.83
SHCBP1-202ENST00000563219 UBE2Q1Q7Z7E8 422 aa3.6□□□□□ -1.83
SHCBP1-202ENST00000563219 UEVLDQ8IX04 471 aa3.6□□□□□ -1.83
SHCBP1-202ENST00000563219 TMEM57Q8N5G2 664 aa3.6□□□□□ -1.83
SHCBP1-202ENST00000563219 ENDOVQ8N8Q3 282 aaKnown RBP3.6□□□□□ -1.83
SHCBP1-202ENST00000563219 PCYOX1LQ8NBM8 494 aa3.6□□□□□ -1.83
SHCBP1-202ENST00000563219 OSR1Q8TAX0 266 aaPredicted RBP3.6□□□□□ -1.83
SHCBP1-202ENST00000563219 BCAS4Q8TDM0 211 aa3.6□□□□□ -1.83
SHCBP1-202ENST00000563219 HERVK_113Q902F9 699 aa3.6□□□□□ -1.83
SHCBP1-202ENST00000563219 HDAC2Q92769 488 aaKnown RBP3.6□□□□□ -1.83
SHCBP1-202ENST00000563219 ATP2A3Q93084 1043 aa3.6□□□□□ -1.83
SHCBP1-202ENST00000563219 KTI12Q96EK9 354 aaPredicted RBP3.6□□□□□ -1.83
SHCBP1-202ENST00000563219 RBM17Q96I25 401 aaKnown RBP3.6□□□□□ -1.83
SHCBP1-202ENST00000563219 FCRL4Q96PJ5 515 aa3.6□□□□□ -1.83
SHCBP1-202ENST00000563219 FCRL5Q96RD9 977 aa3.6□□□□□ -1.83
SHCBP1-202ENST00000563219 TM2D2Q9BX73 214 aa3.6□□□□□ -1.83
SHCBP1-202ENST00000563219 QTRT1Q9BXR0 403 aaKnown RBP3.6□□□□□ -1.83
SHCBP1-202ENST00000563219 GPR63Q9BZJ6 419 aa3.6□□□□□ -1.83
SHCBP1-202ENST00000563219 MLXIPLQ9NP71 852 aa3.6□□□□□ -1.83
SHCBP1-202ENST00000563219 WASH6PQ9NQA3 447 aa3.6□□□□□ -1.83
SHCBP1-202ENST00000563219 SLC22A11Q9NSA0 550 aa3.6□□□□□ -1.83
SHCBP1-202ENST00000563219 BLOC1S4Q9NUP1 217 aa3.6□□□□□ -1.83
SHCBP1-202ENST00000563219 AASSQ9UDR5 926 aa3.6□□□□□ -1.83
SHCBP1-202ENST00000563219 RCE1Q9Y256 329 aa3.6□□□□□ -1.83
SHCBP1-202ENST00000563219 EMSYQ7Z589 1322 aa3.6□□□□□ -1.83
SHCBP1-202ENST00000563219 WDR17Q8IZU2 1322 aa3.6□□□□□ -1.83
SHCBP1-202ENST00000563219 SEPT4O43236 478 aa3.59□□□□□ -1.83
SHCBP1-202ENST00000563219 KLK10O43240 276 aa3.59□□□□□ -1.83
SHCBP1-202ENST00000563219 HOXC11O43248 304 aaPredicted RBP3.59□□□□□ -1.83
SHCBP1-202ENST00000563219 MOSPD3O75425 235 aa3.59□□□□□ -1.83
SHCBP1-202ENST00000563219 PLAUP00749 431 aa3.59□□□□□ -1.83
SHCBP1-202ENST00000563219 CHN1P15882 459 aa3.59□□□□□ -1.83
SHCBP1-202ENST00000563219 CAPN3P20807 821 aa3.59□□□□□ -1.83
SHCBP1-202ENST00000563219 RPS6KB1P23443 525 aa3.59□□□□□ -1.83
SHCBP1-202ENST00000563219 HOXA7P31268 230 aaPredicted RBP3.59□□□□□ -1.83
SHCBP1-202ENST00000563219 GGT5P36269 586 aa3.59□□□□□ -1.83
SHCBP1-202ENST00000563219 CASP2P42575 452 aa3.59□□□□□ -1.83
SHCBP1-202ENST00000563219 CFHR1Q03591 330 aa3.59□□□□□ -1.83
SHCBP1-202ENST00000563219 KRT32Q14532 448 aa3.59□□□□□ -1.83
SHCBP1-202ENST00000563219 ANXA2RQ3ZCQ2 193 aa3.59□□□□□ -1.83
SHCBP1-202ENST00000563219 SLC45A4Q5BKX6 768 aa3.59□□□□□ -1.83
SHCBP1-202ENST00000563219 CEP78Q5JTW2 689 aa3.59□□□□□ -1.83
SHCBP1-202ENST00000563219 SLC18B1Q6NT16 456 aa3.59□□□□□ -1.83
SHCBP1-202ENST00000563219 CHD1LQ86WJ1 897 aa3.59□□□□□ -1.83
SHCBP1-202ENST00000563219 RHPN2Q8IUC4 686 aa3.59□□□□□ -1.83
SHCBP1-202ENST00000563219 PAQR4Q8N4S7 273 aaPredicted RBP3.59□□□□□ -1.83
SHCBP1-202ENST00000563219 FSIP1Q8NA03 581 aa3.59□□□□□ -1.83
SHCBP1-202ENST00000563219 LINS1Q8NG48 757 aa3.59□□□□□ -1.83
SHCBP1-202ENST00000563219 OR52N4Q8NGI2 321 aa3.59□□□□□ -1.83
SHCBP1-202ENST00000563219 KCNG4Q8TDN1 519 aa3.59□□□□□ -1.83
SHCBP1-202ENST00000563219 ZFPM2Q8WW38 1151 aa3.59□□□□□ -1.83
SHCBP1-202ENST00000563219 ZBTB9Q96C00 473 aa3.59□□□□□ -1.83
SHCBP1-202ENST00000563219 TWNKQ96RR1 684 aa3.59□□□□□ -1.83
SHCBP1-202ENST00000563219 FAM118BQ9BPY3 351 aa3.59□□□□□ -1.83
SHCBP1-202ENST00000563219 ARHGAP39Q9C0H5 1083 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms