RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 PGM5Q15124 567 aa6.16□□□□□ -1.42
LINC00557-201ENST00000563184 SMN1Q16637 294 aaKnown RBP6.16□□□□□ -1.42
LINC00557-201ENST00000563184 RUNDC3AQ59EK9 446 aa6.16□□□□□ -1.42
LINC00557-201ENST00000563184 KIAA1755Q5JYT7 1200 aa6.16□□□□□ -1.42
LINC00557-201ENST00000563184 SLC30A9Q6PML9 568 aa6.16□□□□□ -1.42
LINC00557-201ENST00000563184 GALNT16Q8N428 558 aa6.16□□□□□ -1.42
LINC00557-201ENST00000563184 WIPF2Q8TF74 440 aaPredicted RBP6.16□□□□□ -1.42
LINC00557-201ENST00000563184 NTN5Q8WTR8 489 aaPredicted RBP6.16□□□□□ -1.42
LINC00557-201ENST00000563184 PPM1MQ96MI6 270 aa6.16□□□□□ -1.42
LINC00557-201ENST00000563184 SH2D3AQ9BRG2 576 aa6.16□□□□□ -1.42
LINC00557-201ENST00000563184 TRIM31Q9BZY9 425 aa6.16□□□□□ -1.42
LINC00557-201ENST00000563184 STN1Q9H668 368 aaKnown RBP6.16□□□□□ -1.42
LINC00557-201ENST00000563184 ACAD9Q9H845 621 aa6.16□□□□□ -1.42
LINC00557-201ENST00000563184 TMEM248Q9NWD8 314 aa6.16□□□□□ -1.42
LINC00557-201ENST00000563184 HDAC6Q9UBN7 1215 aa6.16□□□□□ -1.42
LINC00557-201ENST00000563184 SLC13A4Q9UKG4 626 aa6.16□□□□□ -1.42
LINC00557-201ENST00000563184 FBXO4Q9UKT5 387 aa6.16□□□□□ -1.42
LINC00557-201ENST00000563184 HSF4Q9ULV5 492 aa6.16□□□□□ -1.42
LINC00557-201ENST00000563184 WDR17Q8IZU2 1322 aa6.16□□□□□ -1.42
LINC00557-201ENST00000563184 FAM90A7PA6NKC0 464 aa6.15□□□□□ -1.42
LINC00557-201ENST00000563184 C2CD4BA6NLJ0 364 aa6.15□□□□□ -1.42
LINC00557-201ENST00000563184 FAM90A22PA8MWA6 464 aa6.15□□□□□ -1.42
LINC00557-201ENST00000563184 FAM90A12PA8MX19 464 aa6.15□□□□□ -1.42
LINC00557-201ENST00000563184 FAM90A23PA8MXZ1 464 aa6.15□□□□□ -1.42
LINC00557-201ENST00000563184 KCNJ18B7U540 433 aa6.15□□□□□ -1.42
LINC00557-201ENST00000563184 PEX12O00623 359 aa6.15□□□□□ -1.42
LINC00557-201ENST00000563184 SYN3O14994 580 aa6.15□□□□□ -1.42
LINC00557-201ENST00000563184 METTL18O95568 372 aa6.15□□□□□ -1.42
LINC00557-201ENST00000563184 HNRNPA1P09651 372 aaKnown RBP eCLIP6.15□□□□□ -1.42
LINC00557-201ENST00000563184 CYP4B1P13584 511 aa6.15□□□□□ -1.42
LINC00557-201ENST00000563184 TNNT1P13805 278 aa6.15□□□□□ -1.42
LINC00557-201ENST00000563184 MPGP29372 298 aa6.15□□□□□ -1.42
LINC00557-201ENST00000563184 TYK2P29597 1187 aa6.15□□□□□ -1.42
LINC00557-201ENST00000563184 RPS6KA3P51812 740 aa6.15□□□□□ -1.42
LINC00557-201ENST00000563184 RHAGQ02094 409 aa6.15□□□□□ -1.42
LINC00557-201ENST00000563184 EARS2Q5JPH6 523 aaKnown RBP6.15□□□□□ -1.42
LINC00557-201ENST00000563184 SH2D4BQ5SQS7 431 aa6.15□□□□□ -1.42
LINC00557-201ENST00000563184 LIPMQ5VYY2 423 aa6.15□□□□□ -1.42
LINC00557-201ENST00000563184 GALNT7Q86SF2 657 aa6.15□□□□□ -1.42
LINC00557-201ENST00000563184 BRSK2Q8IWQ3 736 aa6.15□□□□□ -1.42
LINC00557-201ENST00000563184 NAXEQ8NCW5 288 aa6.15□□□□□ -1.42
LINC00557-201ENST00000563184 LSM14AQ8ND56 463 aaKnown RBP6.15□□□□□ -1.42
LINC00557-201ENST00000563184 HVCN1Q96D96 273 aa6.15□□□□□ -1.42
LINC00557-201ENST00000563184 MOV10Q9HCE1 1003 aaKnown RBP6.15□□□□□ -1.42
LINC00557-201ENST00000563184 UBN1Q9NPG3 1134 aa6.15□□□□□ -1.42
LINC00557-201ENST00000563184 ADARB2Q9NS39 739 aaKnown RBP6.15□□□□□ -1.42
LINC00557-201ENST00000563184 ARL15Q9NXU5 204 aa6.15□□□□□ -1.42
LINC00557-201ENST00000563184 FLRT1Q9NZU1 646 aa6.15□□□□□ -1.42
LINC00557-201ENST00000563184 ZNF69Q9UC07 566 aa6.15□□□□□ -1.42
LINC00557-201ENST00000563184 SLC25A13Q9UJS0 675 aa6.15□□□□□ -1.42
LINC00557-201ENST00000563184 A6NLC8 198 aa6.14□□□□□ -1.43
LINC00557-201ENST00000563184 HSF1Q00613 529 aa6.14□□□□□ -1.43
LINC00557-201ENST00000563184 MAPK7Q13164 816 aa6.14□□□□□ -1.43
LINC00557-201ENST00000563184 RETSATQ6NUM9 610 aa6.14□□□□□ -1.43
LINC00557-201ENST00000563184 KAT2AQ92830 837 aa6.14□□□□□ -1.43
LINC00557-201ENST00000563184 KAT2BQ92831 832 aa6.14□□□□□ -1.43
LINC00557-201ENST00000563184 Q9N2J8 555 aa6.14□□□□□ -1.43
LINC00557-201ENST00000563184 C11orf21Q9P2W6 132 aa6.14□□□□□ -1.43
LINC00557-201ENST00000563184 SMIM35A0A1B0GVV1 85 aa6.13□□□□□ -1.43
LINC00557-201ENST00000563184 TCRBV7S3A2A0A539 114 aa6.13□□□□□ -1.43
LINC00557-201ENST00000563184 CXorf65A6NEN9 183 aa6.13□□□□□ -1.43
LINC00557-201ENST00000563184 CGB1A6NKQ9 187 aa6.13□□□□□ -1.43
LINC00557-201ENST00000563184 PPP6CO00743 305 aa6.13□□□□□ -1.43
LINC00557-201ENST00000563184 TP73O15350 636 aa6.13□□□□□ -1.43
LINC00557-201ENST00000563184 BCAR3O75815 825 aa6.13□□□□□ -1.43
LINC00557-201ENST00000563184 WNT1P04628 370 aa6.13□□□□□ -1.43
LINC00557-201ENST00000563184 XBP1P17861 261 aa6.13□□□□□ -1.43
LINC00557-201ENST00000563184 TFEBP19484 476 aa6.13□□□□□ -1.43
LINC00557-201ENST00000563184 GSTM2P28161 218 aa6.13□□□□□ -1.43
LINC00557-201ENST00000563184 MTNR1AP48039 350 aa6.13□□□□□ -1.43
LINC00557-201ENST00000563184 NR1H2P55055 460 aa6.13□□□□□ -1.43
LINC00557-201ENST00000563184 ARHGAP8P85298 464 aa6.13□□□□□ -1.43
LINC00557-201ENST00000563184 TBX2Q13207 712 aaPredicted RBP6.13□□□□□ -1.43
LINC00557-201ENST00000563184 BYSLQ13895 437 aaKnown RBP6.13□□□□□ -1.43
LINC00557-201ENST00000563184 C10orf76Q5T2E6 689 aa6.13□□□□□ -1.43
LINC00557-201ENST00000563184 SLC9C2Q5TAH2 1124 aa6.13□□□□□ -1.43
LINC00557-201ENST00000563184 PAPD7Q5XG87 772 aaKnown RBP6.13□□□□□ -1.43
LINC00557-201ENST00000563184 MIS18BP1Q6P0N0 1132 aa6.13□□□□□ -1.43
LINC00557-201ENST00000563184 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.13□□□□□ -1.43
LINC00557-201ENST00000563184 PAF1Q8N7H5 531 aa6.13□□□□□ -1.43
LINC00557-201ENST00000563184 FAM47BQ8NA70 645 aa6.13□□□□□ -1.43
LINC00557-201ENST00000563184 DDB2Q92466 427 aa6.13□□□□□ -1.43
LINC00557-201ENST00000563184 NAP1L4Q99733 375 aaKnown RBP6.13□□□□□ -1.43
LINC00557-201ENST00000563184 CLSTN3Q9BQT9 956 aa6.13□□□□□ -1.43
LINC00557-201ENST00000563184 PIMREGQ9BSJ6 248 aa6.13□□□□□ -1.43
LINC00557-201ENST00000563184 QTRT1Q9BXR0 403 aaKnown RBP6.13□□□□□ -1.43
LINC00557-201ENST00000563184 TAOK3Q9H2K8 898 aa6.13□□□□□ -1.43
LINC00557-201ENST00000563184 UPB1Q9UBR1 384 aa6.13□□□□□ -1.43
LINC00557-201ENST00000563184 CYP2D7A0A087X1C5 515 aa6.12□□□□□ -1.43
LINC00557-201ENST00000563184 SH2D7A6NKC9 451 aaPredicted RBP6.12□□□□□ -1.43
LINC00557-201ENST00000563184 MASP2O00187 686 aa6.12□□□□□ -1.43
LINC00557-201ENST00000563184 ANP32CO43423 234 aa6.12□□□□□ -1.43
LINC00557-201ENST00000563184 SH3BP5O60239 455 aa6.12□□□□□ -1.43
LINC00557-201ENST00000563184 WEE2P0C1S8 567 aa6.12□□□□□ -1.43
LINC00557-201ENST00000563184 CD53P19397 219 aa6.12□□□□□ -1.43
LINC00557-201ENST00000563184 ATP5F1P24539 256 aaPredicted RBP6.12□□□□□ -1.43
LINC00557-201ENST00000563184 CERS1P27544 350 aa6.12□□□□□ -1.43
LINC00557-201ENST00000563184 EPHB2P29323 1055 aa6.12□□□□□ -1.43
LINC00557-201ENST00000563184 HNF1BP35680 557 aa6.12□□□□□ -1.43
LINC00557-201ENST00000563184 OAZ1P54368 228 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms