RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 SCO2O43819 266 aa19.02■□□□□ 0.63
RAB40C-206ENST00000561781 ICMTO60725 284 aa19.02■□□□□ 0.63
RAB40C-206ENST00000561781 PTPN1P18031 435 aaKnown RBP19.02■□□□□ 0.63
RAB40C-206ENST00000561781 IFNA8P32881 189 aa19.02■□□□□ 0.63
RAB40C-206ENST00000561781 THOP1P52888 689 aa19.02■□□□□ 0.63
RAB40C-206ENST00000561781 TWF2Q6IBS0 349 aaKnown RBP19.02■□□□□ 0.63
RAB40C-206ENST00000561781 TTC33Q6PID6 262 aaPredicted RBP19.02■□□□□ 0.63
RAB40C-206ENST00000561781 MFSD7Q6UXD7 560 aa19.02■□□□□ 0.63
RAB40C-206ENST00000561781 ZCCHC23Q6ZST2 131 aa19.02■□□□□ 0.63
RAB40C-206ENST00000561781 ANGPTL6Q8NI99 470 aa19.02■□□□□ 0.63
RAB40C-206ENST00000561781 SLITRK1Q96PX8 696 aa19.02■□□□□ 0.63
RAB40C-206ENST00000561781 HMG20AQ9NP66 347 aa19.02■□□□□ 0.63
RAB40C-206ENST00000561781 DNAJC28Q9NX36 388 aa19.02■□□□□ 0.63
RAB40C-206ENST00000561781 MKS1Q9NXB0 559 aa19.02■□□□□ 0.63
RAB40C-206ENST00000561781 GOLGA8QA0A0J9YX86 632 aa19.01■□□□□ 0.63
RAB40C-206ENST00000561781 TCRBV9S1A1TA0A576 114 aa19.01■□□□□ 0.63
RAB40C-206ENST00000561781 GOLGA8OA6NCC3 632 aa19.01■□□□□ 0.63
RAB40C-206ENST00000561781 TRIM64A6NGJ6 449 aa19.01■□□□□ 0.63
RAB40C-206ENST00000561781 A6NL46 340 aa19.01■□□□□ 0.63
RAB40C-206ENST00000561781 GOLGA8NF8WBI6 632 aa19.01■□□□□ 0.63
RAB40C-206ENST00000561781 BPGMP07738 259 aa19.01■□□□□ 0.63
RAB40C-206ENST00000561781 KRT5P13647 590 aa19.01■□□□□ 0.63
RAB40C-206ENST00000561781 TGM1P22735 817 aa19.01■□□□□ 0.63
RAB40C-206ENST00000561781 ECE1P42892 770 aa19.01■□□□□ 0.63
RAB40C-206ENST00000561781 FXNQ16595 210 aa19.01■□□□□ 0.63
RAB40C-206ENST00000561781 SLC30A10Q6XR72 485 aa19.01■□□□□ 0.63
RAB40C-206ENST00000561781 AGMOQ6ZNB7 445 aa19.01■□□□□ 0.63
RAB40C-206ENST00000561781 KCTD1Q719H9 257 aa19.01■□□□□ 0.63
RAB40C-206ENST00000561781 AKAP14Q86UN6 197 aa19.01■□□□□ 0.63
RAB40C-206ENST00000561781 ZC3H7AQ8IWR0 971 aaKnown RBP19.01■□□□□ 0.63
RAB40C-206ENST00000561781 NAT8LQ8N9F0 302 aa19.01■□□□□ 0.63
RAB40C-206ENST00000561781 YME1L1Q96TA2 773 aa19.01■□□□□ 0.63
RAB40C-206ENST00000561781 WDR12Q9GZL7 423 aaKnown RBP19.01■□□□□ 0.63
RAB40C-206ENST00000561781 THG1LQ9NWX6 298 aaKnown RBP19.01■□□□□ 0.63
RAB40C-206ENST00000561781 TCRBV7S3A2A0A539 114 aa19.01■□□□□ 0.63
RAB40C-206ENST00000561781 TMEM88BA6NKF7 163 aa19.01■□□□□ 0.63
RAB40C-206ENST00000561781 NOP56O00567 594 aaKnown RBP19.01■□□□□ 0.63
RAB40C-206ENST00000561781 ALX3O95076 343 aa19.01■□□□□ 0.63
RAB40C-206ENST00000561781 ITGAVP06756 1048 aa19.01■□□□□ 0.63
RAB40C-206ENST00000561781 TCF4P15884 667 aa19.01■□□□□ 0.63
RAB40C-206ENST00000561781 GJA5P36382 358 aa19.01■□□□□ 0.63
RAB40C-206ENST00000561781 TMBIM6P55061 237 aa19.01■□□□□ 0.63
RAB40C-206ENST00000561781 TRIM72Q6ZMU5 477 aa19.01■□□□□ 0.63
RAB40C-206ENST00000561781 RNF19BQ6ZMZ0 732 aa19.01■□□□□ 0.63
RAB40C-206ENST00000561781 BNC2Q6ZN30 1099 aaPredicted RBP19.01■□□□□ 0.63
RAB40C-206ENST00000561781 IGDCC3Q8IVU1 814 aa19.01■□□□□ 0.63
RAB40C-206ENST00000561781 MYO1HQ8N1T3 1032 aa19.01■□□□□ 0.63
RAB40C-206ENST00000561781 ACER1Q8TDN7 264 aa19.01■□□□□ 0.63
RAB40C-206ENST00000561781 FAM20AQ96MK3 541 aa19.01■□□□□ 0.63
RAB40C-206ENST00000561781 TUBA1CQ9BQE3 449 aa19.01■□□□□ 0.63
RAB40C-206ENST00000561781 SENP7Q9BQF6 1050 aa19.01■□□□□ 0.63
RAB40C-206ENST00000561781 SLC13A1Q9BZW2 595 aa19.01■□□□□ 0.63
RAB40C-206ENST00000561781 ZNF112Q9UJU3 913 aa19.01■□□□□ 0.63
RAB40C-206ENST00000561781 TRPM7Q96QT4 1865 aa19■□□□□ 0.63
RAB40C-206ENST00000561781 TRIM49D1C9J1S8 452 aa19■□□□□ 0.63
RAB40C-206ENST00000561781 MEIS2O14770 477 aa19■□□□□ 0.63
RAB40C-206ENST00000561781 RNASEH2AO75792 299 aaKnown RBP19■□□□□ 0.63
RAB40C-206ENST00000561781 XRCC1P18887 633 aaPredicted RBP19■□□□□ 0.63
RAB40C-206ENST00000561781 PERM1Q5SV97 790 aa19■□□□□ 0.63
RAB40C-206ENST00000561781 ATAD3BQ5T9A4 648 aa19■□□□□ 0.63
RAB40C-206ENST00000561781 ZNF786Q8N393 782 aa19■□□□□ 0.63
RAB40C-206ENST00000561781 TRIB2Q92519 343 aa19■□□□□ 0.63
RAB40C-206ENST00000561781 ZIC5Q96T25 663 aa19■□□□□ 0.63
RAB40C-206ENST00000561781 NANOGQ9H9S0 305 aa19■□□□□ 0.63
RAB40C-206ENST00000561781 PCDH12Q9NPG4 1184 aa19■□□□□ 0.63
RAB40C-206ENST00000561781 PARVAQ9NVD7 372 aa19■□□□□ 0.63
RAB40C-206ENST00000561781 RAB20Q9NX57 234 aa19■□□□□ 0.63
RAB40C-206ENST00000561781 PCDHA1Q9Y5I3 950 aa19■□□□□ 0.63
RAB40C-206ENST00000561781 PAPPA2Q9BXP8 1791 aa19■□□□□ 0.63
RAB40C-206ENST00000561781 BCAS2O75934 225 aaPredicted RBP19■□□□□ 0.63
RAB40C-206ENST00000561781 KRT37O76014 449 aa19■□□□□ 0.63
RAB40C-206ENST00000561781 NCF2P19878 526 aaPredicted RBP19■□□□□ 0.63
RAB40C-206ENST00000561781 CLK3P49761 638 aaKnown RBP19■□□□□ 0.63
RAB40C-206ENST00000561781 PIGGQ5H8A4 983 aa19■□□□□ 0.63
RAB40C-206ENST00000561781 FAM117BQ6P1L5 589 aa19■□□□□ 0.63
RAB40C-206ENST00000561781 TMC5Q6UXY8 1006 aa19■□□□□ 0.63
RAB40C-206ENST00000561781 CYP2W1Q8TAV3 490 aa19■□□□□ 0.63
RAB40C-206ENST00000561781 MOSPD1Q9UJG1 213 aa19■□□□□ 0.63
RAB40C-206ENST00000561781 PACSIN3Q9UKS6 424 aa19■□□□□ 0.63
RAB40C-206ENST00000561781 ZMPSTE24O75844 475 aa18.99■□□□□ 0.63
RAB40C-206ENST00000561781 TMEM63AO94886 807 aa18.99■□□□□ 0.63
RAB40C-206ENST00000561781 IDUAP35475 653 aa18.99■□□□□ 0.63
RAB40C-206ENST00000561781 BMPR1AP36894 532 aa18.99■□□□□ 0.63
RAB40C-206ENST00000561781 IDH3AP50213 366 aa18.99■□□□□ 0.63
RAB40C-206ENST00000561781 GDF10P55107 478 aa18.99■□□□□ 0.63
RAB40C-206ENST00000561781 NME3Q13232 169 aa18.99■□□□□ 0.63
RAB40C-206ENST00000561781 PPP6R3Q5H9R7 873 aaPredicted RBP18.99■□□□□ 0.63
RAB40C-206ENST00000561781 COLGALT2Q8IYK4 626 aa18.99■□□□□ 0.63
RAB40C-206ENST00000561781 RCOR2Q8IZ40 523 aa18.99■□□□□ 0.63
RAB40C-206ENST00000561781 Q8N9G6 341 aaPredicted RBP18.99■□□□□ 0.63
RAB40C-206ENST00000561781 TXNDC15Q96J42 360 aa18.99■□□□□ 0.63
RAB40C-206ENST00000561781 RMDN3Q96TC7 470 aa18.99■□□□□ 0.63
RAB40C-206ENST00000561781 HSD17B14Q9BPX1 270 aa18.99■□□□□ 0.63
RAB40C-206ENST00000561781 STRA6Q9BX79 667 aa18.99■□□□□ 0.63
RAB40C-206ENST00000561781 HACD3Q9P035 362 aa18.99■□□□□ 0.63
RAB40C-206ENST00000561781 SUCOQ9UBS9 1254 aaKnown RBP18.99■□□□□ 0.63
RAB40C-206ENST00000561781 CSADQ9Y600 493 aa18.99■□□□□ 0.63
RAB40C-206ENST00000561781 ZHX2Q9Y6X8 837 aa18.99■□□□□ 0.63
RAB40C-206ENST00000561781 HTRA2O43464 458 aaPredicted RBP18.99■□□□□ 0.63
RAB40C-206ENST00000561781 KRT1P04264 644 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms