RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 DUSP28Q4G0W2 176 aa11.23□□□□□ -0.61
NEIL1-202ENST00000561643 DNAL1Q4LDG9 190 aa11.23□□□□□ -0.61
NEIL1-202ENST00000561643 MBLAC2Q68D91 279 aa11.23□□□□□ -0.61
NEIL1-202ENST00000561643 ALKAL1Q6UXT8 129 aa11.23□□□□□ -0.61
NEIL1-202ENST00000561643 PPP4R1Q8TF05 950 aa11.23□□□□□ -0.61
NEIL1-202ENST00000561643 ARNTL2Q8WYA1 636 aa11.23□□□□□ -0.61
NEIL1-202ENST00000561643 CLPTM1LQ96KA5 538 aa11.23□□□□□ -0.61
NEIL1-202ENST00000561643 NR1H4Q96RI1 486 aaPredicted RBP11.23□□□□□ -0.61
NEIL1-202ENST00000561643 CCDC106Q9BWC9 280 aa11.23□□□□□ -0.61
NEIL1-202ENST00000561643 LRRC4Q9HBW1 653 aa11.23□□□□□ -0.61
NEIL1-202ENST00000561643 EIF2B3Q9NR50 452 aaKnown RBP11.23□□□□□ -0.61
NEIL1-202ENST00000561643 DCDC2Q9UHG0 476 aa11.23□□□□□ -0.61
NEIL1-202ENST00000561643 EMCNQ9ULC0 261 aa11.23□□□□□ -0.61
NEIL1-202ENST00000561643 XPOTO43592 962 aaKnown RBP11.23□□□□□ -0.61
NEIL1-202ENST00000561643 USP1O94782 785 aa11.23□□□□□ -0.61
NEIL1-202ENST00000561643 BAG2O95816 211 aa11.23□□□□□ -0.61
NEIL1-202ENST00000561643 ATP5BP06576 529 aaKnown RBP11.23□□□□□ -0.61
NEIL1-202ENST00000561643 CYP2C9P11712 490 aa11.23□□□□□ -0.61
NEIL1-202ENST00000561643 MLH1P40692 756 aa11.23□□□□□ -0.61
NEIL1-202ENST00000561643 PNPLA4P41247 253 aa11.23□□□□□ -0.61
NEIL1-202ENST00000561643 RPL34P49207 117 aaKnown RBP11.23□□□□□ -0.61
NEIL1-202ENST00000561643 TMED1Q13445 227 aa11.23□□□□□ -0.61
NEIL1-202ENST00000561643 PID1Q7Z2X4 250 aa11.23□□□□□ -0.61
NEIL1-202ENST00000561643 ZNF567Q8N184 647 aa11.23□□□□□ -0.61
NEIL1-202ENST00000561643 B3GALNT2Q8NCR0 500 aa11.23□□□□□ -0.61
NEIL1-202ENST00000561643 AGAP3Q96P47 875 aa11.23□□□□□ -0.61
NEIL1-202ENST00000561643 TSPAN18Q96SJ8 248 aa11.23□□□□□ -0.61
NEIL1-202ENST00000561643 NAT9Q9BTE0 207 aa11.23□□□□□ -0.61
NEIL1-202ENST00000561643 KLHL8Q9P2G9 620 aaPredicted RBP11.23□□□□□ -0.61
NEIL1-202ENST00000561643 STAP1Q9ULZ2 295 aa11.23□□□□□ -0.61
NEIL1-202ENST00000561643 APOBEC2Q9Y235 224 aaKnown RBP11.23□□□□□ -0.61
NEIL1-202ENST00000561643 KCNK1O00180 336 aa11.22□□□□□ -0.61
NEIL1-202ENST00000561643 EEF2KO00418 725 aaKnown RBP11.22□□□□□ -0.61
NEIL1-202ENST00000561643 CLDN5O00501 218 aa11.22□□□□□ -0.61
NEIL1-202ENST00000561643 DAB1O75553 588 aa11.22□□□□□ -0.61
NEIL1-202ENST00000561643 POLBP06746 335 aa11.22□□□□□ -0.61
NEIL1-202ENST00000561643 FGF3P11487 239 aaPredicted RBP11.22□□□□□ -0.61
NEIL1-202ENST00000561643 DARSP14868 501 aaKnown RBP11.22□□□□□ -0.61
NEIL1-202ENST00000561643 ACAT1P24752 427 aaKnown RBP11.22□□□□□ -0.61
NEIL1-202ENST00000561643 GJA8P48165 433 aa11.22□□□□□ -0.61
NEIL1-202ENST00000561643 GLUD2P49448 558 aa11.22□□□□□ -0.61
NEIL1-202ENST00000561643 MAP7Q14244 749 aa11.22□□□□□ -0.61
NEIL1-202ENST00000561643 SV2CQ496J9 727 aa11.22□□□□□ -0.61
NEIL1-202ENST00000561643 PPM1JQ5JR12 505 aa11.22□□□□□ -0.61
NEIL1-202ENST00000561643 STXBP5Q5T5C0 1151 aa11.22□□□□□ -0.61
NEIL1-202ENST00000561643 TEDDM1Q5T9Z0 273 aa11.22□□□□□ -0.61
NEIL1-202ENST00000561643 SATL1Q86VE3 508 aa11.22□□□□□ -0.61
NEIL1-202ENST00000561643 ULK2Q8IYT8 1036 aa11.22□□□□□ -0.61
NEIL1-202ENST00000561643 SIX6OS1Q8N1H7 587 aa11.22□□□□□ -0.61
NEIL1-202ENST00000561643 GTF3C2Q8WUA4 911 aaPredicted RBP11.22□□□□□ -0.61
NEIL1-202ENST00000561643 TTC1Q99614 292 aa11.22□□□□□ -0.61
NEIL1-202ENST00000561643 SLX1AQ9BQ83 275 aa11.22□□□□□ -0.61
NEIL1-202ENST00000561643 RNF39Q9H2S5 420 aa11.22□□□□□ -0.61
NEIL1-202ENST00000561643 GDAP2Q9NXN4 497 aa11.22□□□□□ -0.61
NEIL1-202ENST00000561643 MEI4A8MW99 385 aa11.22□□□□□ -0.61
NEIL1-202ENST00000561643 TM7SF2O76062 418 aa11.22□□□□□ -0.61
NEIL1-202ENST00000561643 GSRP00390 522 aa11.22□□□□□ -0.61
NEIL1-202ENST00000561643 SERPINE1P05121 402 aa11.22□□□□□ -0.61
NEIL1-202ENST00000561643 NOS2P35228 1153 aa11.22□□□□□ -0.61
NEIL1-202ENST00000561643 GARSP41250 739 aaKnown RBP11.22□□□□□ -0.61
NEIL1-202ENST00000561643 GRIA2P42262 883 aa11.22□□□□□ -0.61
NEIL1-202ENST00000561643 CDC42EP1Q00587 391 aa11.22□□□□□ -0.61
NEIL1-202ENST00000561643 NAB1Q13506 487 aa11.22□□□□□ -0.61
NEIL1-202ENST00000561643 C1orf146Q5VVC0 180 aa11.22□□□□□ -0.61
NEIL1-202ENST00000561643 PSTKQ8IV42 348 aaKnown RBP11.22□□□□□ -0.61
NEIL1-202ENST00000561643 C10orf107Q8IVU9 208 aa11.22□□□□□ -0.61
NEIL1-202ENST00000561643 ST13P4Q8IZP2 240 aaPredicted RBP11.22□□□□□ -0.61
NEIL1-202ENST00000561643 SLC10A4Q96EP9 437 aa11.22□□□□□ -0.61
NEIL1-202ENST00000561643 ATXN7L3BQ96GX2 97 aa11.22□□□□□ -0.61
NEIL1-202ENST00000561643 SIKE1Q9BRV8 207 aa11.22□□□□□ -0.61
NEIL1-202ENST00000561643 MED10Q9BTT4 135 aa11.22□□□□□ -0.61
NEIL1-202ENST00000561643 ZNF212Q9UDV6 495 aa11.22□□□□□ -0.61
NEIL1-202ENST00000561643 PDHXO00330 501 aa11.22□□□□□ -0.61
NEIL1-202ENST00000561643 SMIM10L2AP0DMW4 78 aa11.22□□□□□ -0.61
NEIL1-202ENST00000561643 SMIM10L2BP0DMW5 78 aa11.22□□□□□ -0.61
NEIL1-202ENST00000561643 NDUFV1P49821 464 aa11.22□□□□□ -0.61
NEIL1-202ENST00000561643 DSG1Q02413 1049 aa11.22□□□□□ -0.61
NEIL1-202ENST00000561643 SOX4Q06945 474 aaPredicted RBP11.22□□□□□ -0.61
NEIL1-202ENST00000561643 OLIG2Q13516 323 aa11.22□□□□□ -0.61
NEIL1-202ENST00000561643 PCLAFQ15004 111 aa11.22□□□□□ -0.61
NEIL1-202ENST00000561643 LRRC36Q1X8D7 754 aa11.22□□□□□ -0.61
NEIL1-202ENST00000561643 TRMT5Q32P41 509 aaKnown RBP11.22□□□□□ -0.61
NEIL1-202ENST00000561643 ISLR2Q6UXK2 745 aa11.22□□□□□ -0.61
NEIL1-202ENST00000561643 RIPOR1Q6ZS17 1223 aa11.22□□□□□ -0.61
NEIL1-202ENST00000561643 NET1Q7Z628 596 aaPredicted RBP11.22□□□□□ -0.61
NEIL1-202ENST00000561643 TP53INP2Q8IXH6 220 aa11.22□□□□□ -0.61
NEIL1-202ENST00000561643 CERS2Q96G23 380 aa11.22□□□□□ -0.61
NEIL1-202ENST00000561643 ZNF778Q96MU6 729 aa11.22□□□□□ -0.61
NEIL1-202ENST00000561643 PGLYRP2Q96PD5 576 aa11.22□□□□□ -0.61
NEIL1-202ENST00000561643 DUSP16Q9BY84 665 aa11.22□□□□□ -0.61
NEIL1-202ENST00000561643 SPATA7Q9P0W8 599 aa11.22□□□□□ -0.61
NEIL1-202ENST00000561643 ANGPTL2Q9UKU9 493 aa11.22□□□□□ -0.61
NEIL1-202ENST00000561643 A0A0J9YVX5 310 aa11.21□□□□□ -0.61
NEIL1-202ENST00000561643 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.21□□□□□ -0.61
NEIL1-202ENST00000561643 MAGEB3O15480 346 aa11.21□□□□□ -0.61
NEIL1-202ENST00000561643 STRNO43815 780 aa11.21□□□□□ -0.61
NEIL1-202ENST00000561643 USP12O75317 370 aa11.21□□□□□ -0.61
NEIL1-202ENST00000561643 C6orf222P0C671 652 aaPredicted RBP11.21□□□□□ -0.61
NEIL1-202ENST00000561643 NPR3P17342 541 aa11.21□□□□□ -0.61
NEIL1-202ENST00000561643 GMPRP36959 345 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms