RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 LRIG2O94898 1065 aa14.3□□□□□ -0.12
TPM1-230ENST00000561266 LMNAP02545 664 aaKnown RBP14.3□□□□□ -0.12
TPM1-230ENST00000561266 CYP1A2P05177 515 aa14.3□□□□□ -0.12
TPM1-230ENST00000561266 DLDP09622 509 aaKnown RBP14.3□□□□□ -0.12
TPM1-230ENST00000561266 VAV1P15498 845 aa14.3□□□□□ -0.12
TPM1-230ENST00000561266 POLR2EP19388 210 aaKnown RBP14.3□□□□□ -0.12
TPM1-230ENST00000561266 GLDCP23378 1020 aa14.3□□□□□ -0.12
TPM1-230ENST00000561266 PSMA2P25787 234 aa14.3□□□□□ -0.12
TPM1-230ENST00000561266 HOXD11P31277 338 aaPredicted RBP14.3□□□□□ -0.12
TPM1-230ENST00000561266 CDH4P55283 916 aa14.3□□□□□ -0.12
TPM1-230ENST00000561266 SCAPQ12770 1279 aa14.3□□□□□ -0.12
TPM1-230ENST00000561266 SIM2Q14190 667 aaPredicted RBP14.3□□□□□ -0.12
TPM1-230ENST00000561266 MAP7D1Q3KQU3 841 aa14.3□□□□□ -0.12
TPM1-230ENST00000561266 FNDC3BQ53EP0 1204 aaKnown RBP14.3□□□□□ -0.12
TPM1-230ENST00000561266 TTC39BQ5VTQ0 682 aaPredicted RBP14.3□□□□□ -0.12
TPM1-230ENST00000561266 RNF219Q5W0B1 726 aaPredicted RBP14.3□□□□□ -0.12
TPM1-230ENST00000561266 NLRP14Q86W24 1093 aa14.3□□□□□ -0.12
TPM1-230ENST00000561266 UCMAQ8WVF2 138 aa14.3□□□□□ -0.12
TPM1-230ENST00000561266 NTAN1Q96AB6 310 aa14.3□□□□□ -0.12
TPM1-230ENST00000561266 MRGPRX1Q96LB2 322 aa14.3□□□□□ -0.12
TPM1-230ENST00000561266 POLMQ9NP87 494 aaPredicted RBP14.3□□□□□ -0.12
TPM1-230ENST00000561266 PRSS16Q9NQE7 514 aa14.3□□□□□ -0.12
TPM1-230ENST00000561266 SPTLC3Q9NUV7 552 aa14.3□□□□□ -0.12
TPM1-230ENST00000561266 SMG5Q9UPR3 1016 aaKnown RBP14.3□□□□□ -0.12
TPM1-230ENST00000561266 ACTL7AQ9Y615 435 aa14.3□□□□□ -0.12
TPM1-230ENST00000561266 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.29□□□□□ -0.12
TPM1-230ENST00000561266 TTC34A8MYJ7 566 aa14.29□□□□□ -0.12
TPM1-230ENST00000561266 AKR1B15C9JRZ8 316 aaPredicted RBP14.29□□□□□ -0.12
TPM1-230ENST00000561266 SNAP91O60641 907 aa14.29□□□□□ -0.12
TPM1-230ENST00000561266 CLDN11O75508 207 aa14.29□□□□□ -0.12
TPM1-230ENST00000561266 RPP40O75818 363 aaKnown RBP14.29□□□□□ -0.12
TPM1-230ENST00000561266 EPHX1P07099 455 aa14.29□□□□□ -0.12
TPM1-230ENST00000561266 IL1R2P27930 398 aa14.29□□□□□ -0.12
TPM1-230ENST00000561266 MIPP30301 263 aa14.29□□□□□ -0.12
TPM1-230ENST00000561266 NRG1Q02297 640 aaPredicted RBP14.29□□□□□ -0.12
TPM1-230ENST00000561266 SEMA3BQ13214 749 aa14.29□□□□□ -0.12
TPM1-230ENST00000561266 ZNF177Q13360 481 aaPredicted RBP14.29□□□□□ -0.12
TPM1-230ENST00000561266 SLC18A3Q16572 532 aa14.29□□□□□ -0.12
TPM1-230ENST00000561266 TXNRD3NBQ6F5E7 133 aa14.29□□□□□ -0.12
TPM1-230ENST00000561266 PPP1R2P3Q6NXS1 205 aa14.29□□□□□ -0.12
TPM1-230ENST00000561266 SERPINA13PQ6UXR4 307 aa14.29□□□□□ -0.12
TPM1-230ENST00000561266 PRR23BQ6ZRT6 265 aa14.29□□□□□ -0.12
TPM1-230ENST00000561266 SLFN11Q7Z7L1 901 aa14.29□□□□□ -0.12
TPM1-230ENST00000561266 OR7D4Q8NG98 312 aa14.29□□□□□ -0.12
TPM1-230ENST00000561266 DUSP15Q9H1R2 295 aaPredicted RBP14.29□□□□□ -0.12
TPM1-230ENST00000561266 NOL6Q9H6R4 1146 aaKnown RBP14.29□□□□□ -0.12
TPM1-230ENST00000561266 NHEJ1Q9H9Q4 299 aaPredicted RBP14.29□□□□□ -0.12
TPM1-230ENST00000561266 PPARGC1AQ9UBK2 798 aaKnown RBP14.29□□□□□ -0.12
TPM1-230ENST00000561266 PCSK1NQ9UHG2 260 aa14.29□□□□□ -0.12
TPM1-230ENST00000561266 PAXBP1Q9Y5B6 917 aa14.29□□□□□ -0.12
TPM1-230ENST00000561266 SSU72P8A0A1W2PR75 194 aa14.28□□□□□ -0.12
TPM1-230ENST00000561266 LRCH4O75427 683 aa14.28□□□□□ -0.12
TPM1-230ENST00000561266 MT-CO1P00395 513 aa14.28□□□□□ -0.12
TPM1-230ENST00000561266 MYBL1P10243 752 aa14.28□□□□□ -0.12
TPM1-230ENST00000561266 P2RY2P41231 377 aa14.28□□□□□ -0.12
TPM1-230ENST00000561266 MTA1Q13330 715 aa14.28□□□□□ -0.12
TPM1-230ENST00000561266 CAMK2GQ13555 558 aaPredicted RBP14.28□□□□□ -0.12
TPM1-230ENST00000561266 PLK5Q496M5 336 aa14.28□□□□□ -0.12
TPM1-230ENST00000561266 SDE2Q6IQ49 451 aa14.28□□□□□ -0.12
TPM1-230ENST00000561266 LRRC31Q6UY01 552 aa14.28□□□□□ -0.12
TPM1-230ENST00000561266 GVINP1Q7Z2Y8 2422 aa14.28□□□□□ -0.12
TPM1-230ENST00000561266 CACUL1Q86Y37 369 aa14.28□□□□□ -0.12
TPM1-230ENST00000561266 PGBD3Q8N328 593 aa14.28□□□□□ -0.12
TPM1-230ENST00000561266 FNIP1Q8TF40 1166 aa14.28□□□□□ -0.12
TPM1-230ENST00000561266 MRFAP1L1Q96HT8 127 aa14.28□□□□□ -0.12
TPM1-230ENST00000561266 SNRNP25Q9BV90 132 aaKnown RBP14.28□□□□□ -0.12
TPM1-230ENST00000561266 NUP85Q9BW27 656 aa14.28□□□□□ -0.12
TPM1-230ENST00000561266 ZYG11BQ9C0D3 744 aa14.28□□□□□ -0.12
TPM1-230ENST00000561266 SEMA4AQ9H3S1 761 aa14.28□□□□□ -0.12
TPM1-230ENST00000561266 BCCIPQ9P287 314 aaKnown RBP eCLIP14.28□□□□□ -0.12
TPM1-230ENST00000561266 PLA2G4CQ9UP65 541 aa14.28□□□□□ -0.12
TPM1-230ENST00000561266 ZNF292O60281 2723 aa14.27□□□□□ -0.12
TPM1-230ENST00000561266 ANKRD62A6NC57 917 aa14.27□□□□□ -0.13
TPM1-230ENST00000561266 K7ERQ8 282 aa14.27□□□□□ -0.13
TPM1-230ENST00000561266 NPC1O15118 1278 aa14.27□□□□□ -0.13
TPM1-230ENST00000561266 SIN3BO75182 1162 aa14.27□□□□□ -0.13
TPM1-230ENST00000561266 ZMPSTE24O75844 475 aa14.27□□□□□ -0.13
TPM1-230ENST00000561266 CD160O95971 181 aa14.27□□□□□ -0.13
TPM1-230ENST00000561266 ATP5BP06576 529 aaKnown RBP14.27□□□□□ -0.13
TPM1-230ENST00000561266 RHOCP08134 193 aa14.27□□□□□ -0.13
TPM1-230ENST00000561266 TGM1P22735 817 aa14.27□□□□□ -0.13
TPM1-230ENST00000561266 CNR2P34972 360 aa14.27□□□□□ -0.13
TPM1-230ENST00000561266 ACVRL1P37023 503 aa14.27□□□□□ -0.13
TPM1-230ENST00000561266 ECT2LQ008S8 904 aa14.27□□□□□ -0.13
TPM1-230ENST00000561266 SLC12A1Q13621 1099 aa14.27□□□□□ -0.13
TPM1-230ENST00000561266 ARL13BQ3SXY8 428 aa14.27□□□□□ -0.13
TPM1-230ENST00000561266 C9orf64Q5T6V5 341 aa14.27□□□□□ -0.13
TPM1-230ENST00000561266 CEP68Q76N32 757 aa14.27□□□□□ -0.13
TPM1-230ENST00000561266 VPS36Q86VN1 386 aa14.27□□□□□ -0.13
TPM1-230ENST00000561266 TMPRSS6Q8IU80 811 aa14.27□□□□□ -0.13
TPM1-230ENST00000561266 DEFB119Q8N690 84 aa14.27□□□□□ -0.13
TPM1-230ENST00000561266 NETO2Q8NC67 525 aa14.27□□□□□ -0.13
TPM1-230ENST00000561266 FRS2Q8WU20 508 aa14.27□□□□□ -0.13
TPM1-230ENST00000561266 PTPRN2Q92932 1015 aa14.27□□□□□ -0.13
TPM1-230ENST00000561266 TRIM11Q96F44 468 aa14.27□□□□□ -0.13
TPM1-230ENST00000561266 KCTD15Q96SI1 283 aaPredicted RBP14.27□□□□□ -0.13
TPM1-230ENST00000561266 KLC2Q9H0B6 622 aa14.27□□□□□ -0.13
TPM1-230ENST00000561266 PARD6AQ9NPB6 346 aa14.27□□□□□ -0.13
TPM1-230ENST00000561266 OSGEPQ9NPF4 335 aa14.27□□□□□ -0.13
TPM1-230ENST00000561266 DNAI1Q9UI46 699 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms