RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 CST3P01034 146 aaPredicted RBP9.9□□□□□ -0.82
HERC1-210ENST00000560897 GIMD1P0DJR0 217 aa9.9□□□□□ -0.82
HERC1-210ENST00000560897 P4HA1P13674 534 aa9.9□□□□□ -0.82
HERC1-210ENST00000560897 AKT2P31751 481 aa9.9□□□□□ -0.82
HERC1-210ENST00000560897 CD70P32970 193 aa9.9□□□□□ -0.82
HERC1-210ENST00000560897 CD97P48960 835 aa9.9□□□□□ -0.82
HERC1-210ENST00000560897 ZNF667Q5HYK9 610 aa9.9□□□□□ -0.82
HERC1-210ENST00000560897 C9orf64Q5T6V5 341 aa9.9□□□□□ -0.82
HERC1-210ENST00000560897 CCDC186Q7Z3E2 898 aa9.9□□□□□ -0.82
HERC1-210ENST00000560897 TICAM1Q8IUC6 712 aa9.9□□□□□ -0.82
HERC1-210ENST00000560897 MFN1Q8IWA4 741 aa9.9□□□□□ -0.82
HERC1-210ENST00000560897 FAM217AQ8IXS0 508 aa9.9□□□□□ -0.82
HERC1-210ENST00000560897 ZC3H3Q8IXZ2 948 aaKnown RBP9.9□□□□□ -0.82
HERC1-210ENST00000560897 IFT43Q96FT9 208 aa9.9□□□□□ -0.82
HERC1-210ENST00000560897 IL12RB2Q99665 862 aa9.9□□□□□ -0.82
HERC1-210ENST00000560897 KIAA1586Q9HCI6 787 aa9.9□□□□□ -0.82
HERC1-210ENST00000560897 PNPLA8Q9NP80 782 aa9.9□□□□□ -0.82
HERC1-210ENST00000560897 BLOC1S4Q9NUP1 217 aa9.9□□□□□ -0.82
HERC1-210ENST00000560897 ARHGAP20Q9P2F6 1191 aa9.9□□□□□ -0.82
HERC1-210ENST00000560897 A0A087X0B3 334 aa9.89□□□□□ -0.83
HERC1-210ENST00000560897 C10orf142B7Z368 130 aa9.89□□□□□ -0.83
HERC1-210ENST00000560897 NVLO15381 856 aaKnown RBP9.89□□□□□ -0.83
HERC1-210ENST00000560897 SLC31A1O15431 190 aa9.89□□□□□ -0.83
HERC1-210ENST00000560897 MTSS1O43312 755 aa9.89□□□□□ -0.83
HERC1-210ENST00000560897 PLRG1O43660 514 aaKnown RBP9.89□□□□□ -0.83
HERC1-210ENST00000560897 STX6O43752 255 aa9.89□□□□□ -0.83
HERC1-210ENST00000560897 MOCS3O95396 460 aa9.89□□□□□ -0.83
HERC1-210ENST00000560897 STAU1O95793 577 aaKnown RBP9.89□□□□□ -0.83
HERC1-210ENST00000560897 SLFN14P0C7P3 912 aa9.89□□□□□ -0.83
HERC1-210ENST00000560897 HGFP14210 728 aa9.89□□□□□ -0.83
HERC1-210ENST00000560897 MZF1P28698 734 aaPredicted RBP9.89□□□□□ -0.83
HERC1-210ENST00000560897 NOS2P35228 1153 aa9.89□□□□□ -0.83
HERC1-210ENST00000560897 NNMTP40261 264 aa9.89□□□□□ -0.83
HERC1-210ENST00000560897 CSKP41240 450 aa9.89□□□□□ -0.83
HERC1-210ENST00000560897 ATP1A2P50993 1020 aa9.89□□□□□ -0.83
HERC1-210ENST00000560897 PDX1P52945 283 aa9.89□□□□□ -0.83
HERC1-210ENST00000560897 MYL6P60660 151 aa9.89□□□□□ -0.83
HERC1-210ENST00000560897 ELAVL3Q14576 367 aaKnown RBP9.89□□□□□ -0.83
HERC1-210ENST00000560897 ZNF699Q32M78 642 aa9.89□□□□□ -0.83
HERC1-210ENST00000560897 ZNF542PQ5EBM4 170 aa9.89□□□□□ -0.83
HERC1-210ENST00000560897 FAM46CQ5VWP2 391 aa9.89□□□□□ -0.83
HERC1-210ENST00000560897 ARL6IP4Q66PJ3 421 aaKnown RBP9.89□□□□□ -0.83
HERC1-210ENST00000560897 CLEC20AQ6ZU45 233 aa9.89□□□□□ -0.83
HERC1-210ENST00000560897 PTAR1Q7Z6K3 402 aaPredicted RBP9.89□□□□□ -0.83
HERC1-210ENST00000560897 KIAA0907Q7Z7F0 614 aaPredicted RBP9.89□□□□□ -0.83
HERC1-210ENST00000560897 CBWD2Q8IUF1 395 aa9.89□□□□□ -0.83
HERC1-210ENST00000560897 SRRM1Q8IYB3 904 aaKnown RBP9.89□□□□□ -0.83
HERC1-210ENST00000560897 STK40Q8N2I9 435 aa9.89□□□□□ -0.83
HERC1-210ENST00000560897 EFCAB3Q8N7B9 438 aa9.89□□□□□ -0.83
HERC1-210ENST00000560897 KDM1BQ8NB78 822 aa9.89□□□□□ -0.83
HERC1-210ENST00000560897 ZNF548Q8NEK5 533 aaPredicted RBP9.89□□□□□ -0.83
HERC1-210ENST00000560897 CATSPER2Q96P56 530 aa9.89□□□□□ -0.83
HERC1-210ENST00000560897 CCDC3Q9BQI4 270 aa9.89□□□□□ -0.83
HERC1-210ENST00000560897 SRRTQ9BXP5 876 aaKnown RBP9.89□□□□□ -0.83
HERC1-210ENST00000560897 ZNF768Q9H5H4 540 aaKnown RBP9.89□□□□□ -0.83
HERC1-210ENST00000560897 SALL4Q9UJQ4 1053 aa9.89□□□□□ -0.83
HERC1-210ENST00000560897 MED13Q9UHV7 2174 aa9.88□□□□□ -0.83
HERC1-210ENST00000560897 CENPEQ02224 2701 aa9.88□□□□□ -0.83
HERC1-210ENST00000560897 TTC34A8MYJ7 566 aa9.88□□□□□ -0.83
HERC1-210ENST00000560897 TBL1XO60907 577 aa9.88□□□□□ -0.83
HERC1-210ENST00000560897 SRPRAP08240 638 aaKnown RBP9.88□□□□□ -0.83
HERC1-210ENST00000560897 CD82P27701 267 aa9.88□□□□□ -0.83
HERC1-210ENST00000560897 DCTP40126 519 aa9.88□□□□□ -0.83
HERC1-210ENST00000560897 KIF11P52732 1056 aa9.88□□□□□ -0.83
HERC1-210ENST00000560897 HMGN5P82970 282 aaKnown RBP9.88□□□□□ -0.83
HERC1-210ENST00000560897 KLRB1Q12918 225 aa9.88□□□□□ -0.83
HERC1-210ENST00000560897 BIRC3Q13489 604 aa9.88□□□□□ -0.83
HERC1-210ENST00000560897 ARID5BQ14865 1188 aa9.88□□□□□ -0.83
HERC1-210ENST00000560897 DEFB133Q30KQ1 61 aa9.88□□□□□ -0.83
HERC1-210ENST00000560897 RILPL1Q5EBL4 403 aa9.88□□□□□ -0.83
HERC1-210ENST00000560897 PERM1Q5SV97 790 aa9.88□□□□□ -0.83
HERC1-210ENST00000560897 ADGRF1Q5T601 910 aa9.88□□□□□ -0.83
HERC1-210ENST00000560897 STXBP4Q6ZWJ1 553 aa9.88□□□□□ -0.83
HERC1-210ENST00000560897 SCD5Q86SK9 330 aa9.88□□□□□ -0.83
HERC1-210ENST00000560897 HEATR4Q86WZ0 1026 aa9.88□□□□□ -0.83
HERC1-210ENST00000560897 DCP2Q8IU60 420 aaKnown RBP9.88□□□□□ -0.83
HERC1-210ENST00000560897 TMEM145Q8NBT3 493 aa9.88□□□□□ -0.83
HERC1-210ENST00000560897 OR13H1Q8NG92 308 aa9.88□□□□□ -0.83
HERC1-210ENST00000560897 FAM174AQ8TBP5 190 aa9.88□□□□□ -0.83
HERC1-210ENST00000560897 TTC17Q96AE7 1141 aa9.88□□□□□ -0.83
HERC1-210ENST00000560897 CCDC127Q96BQ5 260 aa9.88□□□□□ -0.83
HERC1-210ENST00000560897 MYO19Q96H55 970 aa9.88□□□□□ -0.83
HERC1-210ENST00000560897 TMEM74Q96NL1 305 aa9.88□□□□□ -0.83
HERC1-210ENST00000560897 STRA6Q9BX79 667 aa9.88□□□□□ -0.83
HERC1-210ENST00000560897 DNAI2Q9GZS0 605 aa9.88□□□□□ -0.83
HERC1-210ENST00000560897 PREBQ9HCU5 417 aa9.88□□□□□ -0.83
HERC1-210ENST00000560897 CUEDC1Q9NWM3 386 aaPredicted RBP9.88□□□□□ -0.83
HERC1-210ENST00000560897 IPO11Q9UI26 975 aaKnown RBP9.88□□□□□ -0.83
HERC1-210ENST00000560897 ERVW-1Q9UQF0 538 aa9.88□□□□□ -0.83
HERC1-210ENST00000560897 KIF3AQ9Y496 699 aa9.88□□□□□ -0.83
HERC1-210ENST00000560897 LOXL2Q9Y4K0 774 aa9.88□□□□□ -0.83
HERC1-210ENST00000560897 CSNK1G3Q9Y6M4 447 aa9.88□□□□□ -0.83
HERC1-210ENST00000560897 PRAMEF33A0A0G2JMD5 474 aa9.87□□□□□ -0.83
HERC1-210ENST00000560897 A0A1W2PQ27 194 aa9.87□□□□□ -0.83
HERC1-210ENST00000560897 A0A1W2PQ64 194 aa9.87□□□□□ -0.83
HERC1-210ENST00000560897 A0A1W2PQC6 194 aa9.87□□□□□ -0.83
HERC1-210ENST00000560897 A6NNZ2 444 aa9.87□□□□□ -0.83
HERC1-210ENST00000560897 C1QTNF3-AMACRE9PGA6 284 aa9.87□□□□□ -0.83
HERC1-210ENST00000560897 AQP9O43315 295 aa9.87□□□□□ -0.83
HERC1-210ENST00000560897 PRAMEF10O60809 474 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms