RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 ZCCHC14Q8WYQ9 949 aaKnown RBP12.19□□□□□ -0.46
LDLR-212ENST00000560467 TTLL2Q9BWV7 592 aa12.19□□□□□ -0.46
LDLR-212ENST00000560467 TMEM74BQ9NUR3 256 aa12.19□□□□□ -0.46
LDLR-212ENST00000560467 TMEM30AQ9NV96 361 aa12.19□□□□□ -0.46
LDLR-212ENST00000560467 CLIC5Q9NZA1 410 aa12.19□□□□□ -0.46
LDLR-212ENST00000560467 BCCIPQ9P287 314 aaKnown RBP eCLIP12.19□□□□□ -0.46
LDLR-212ENST00000560467 TJP2Q9UDY2 1190 aa12.19□□□□□ -0.46
LDLR-212ENST00000560467 PCDHA3Q9Y5H8 950 aa12.19□□□□□ -0.46
LDLR-212ENST00000560467 OBSL1O75147 1896 aa12.19□□□□□ -0.46
LDLR-212ENST00000560467 AKAP13Q12802 2813 aa12.18□□□□□ -0.46
LDLR-212ENST00000560467 SPAARA0A1B0GVQ0 90 aa12.18□□□□□ -0.46
LDLR-212ENST00000560467 TCRBV21S2A2A0A5A6 115 aa12.18□□□□□ -0.46
LDLR-212ENST00000560467 M0QYT0 321 aa12.18□□□□□ -0.46
LDLR-212ENST00000560467 CES2O00748 559 aa12.18□□□□□ -0.46
LDLR-212ENST00000560467 MAP3K13O43283 966 aa12.18□□□□□ -0.46
LDLR-212ENST00000560467 ZRANB2O95218 330 aaKnown RBP eCLIP12.18□□□□□ -0.46
LDLR-212ENST00000560467 KAT7O95251 611 aa12.18□□□□□ -0.46
LDLR-212ENST00000560467 GJB6O95452 261 aa12.18□□□□□ -0.46
LDLR-212ENST00000560467 OLFM2O95897 454 aa12.18□□□□□ -0.46
LDLR-212ENST00000560467 OAS1P00973 400 aaKnown RBP12.18□□□□□ -0.46
LDLR-212ENST00000560467 ATP1A1P05023 1023 aaKnown RBP12.18□□□□□ -0.46
LDLR-212ENST00000560467 APODP05090 189 aa12.18□□□□□ -0.46
LDLR-212ENST00000560467 ENGP17813 658 aa12.18□□□□□ -0.46
LDLR-212ENST00000560467 PFKLP17858 780 aa12.18□□□□□ -0.46
LDLR-212ENST00000560467 CTNNA2P26232 953 aa12.18□□□□□ -0.46
LDLR-212ENST00000560467 CTNNA1P35221 906 aaKnown RBP12.18□□□□□ -0.46
LDLR-212ENST00000560467 RDXP35241 583 aaKnown RBP12.18□□□□□ -0.46
LDLR-212ENST00000560467 AIF1P55008 147 aa12.18□□□□□ -0.46
LDLR-212ENST00000560467 TUBB4BP68371 445 aa12.18□□□□□ -0.46
LDLR-212ENST00000560467 DEUP1Q05D60 604 aa12.18□□□□□ -0.46
LDLR-212ENST00000560467 TAF10Q12962 218 aa12.18□□□□□ -0.46
LDLR-212ENST00000560467 TAF5Q15542 800 aa12.18□□□□□ -0.46
LDLR-212ENST00000560467 CDO1Q16878 200 aa12.18□□□□□ -0.46
LDLR-212ENST00000560467 WHAMMP3Q1A5X7 153 aa12.18□□□□□ -0.46
LDLR-212ENST00000560467 MAP7D1Q3KQU3 841 aa12.18□□□□□ -0.46
LDLR-212ENST00000560467 CCDC14Q49A88 953 aa12.18□□□□□ -0.46
LDLR-212ENST00000560467 PAPD7Q5XG87 772 aaKnown RBP12.18□□□□□ -0.46
LDLR-212ENST00000560467 RHBDF2Q6PJF5 856 aa12.18□□□□□ -0.46
LDLR-212ENST00000560467 STRADAQ7RTN6 431 aa12.18□□□□□ -0.46
LDLR-212ENST00000560467 GPRIN1Q7Z2K8 1008 aa12.18□□□□□ -0.46
LDLR-212ENST00000560467 POLNQ7Z5Q5 900 aa12.18□□□□□ -0.46
LDLR-212ENST00000560467 CCDC50Q8IVM0 306 aa12.18□□□□□ -0.46
LDLR-212ENST00000560467 ADGRG2Q8IZP9 1017 aa12.18□□□□□ -0.46
LDLR-212ENST00000560467 KCTD6Q8NC69 237 aa12.18□□□□□ -0.46
LDLR-212ENST00000560467 CLEC4CQ8WTT0 213 aa12.18□□□□□ -0.46
LDLR-212ENST00000560467 MAIP1Q8WWC4 291 aa12.18□□□□□ -0.46
LDLR-212ENST00000560467 HES6Q96HZ4 224 aa12.18□□□□□ -0.46
LDLR-212ENST00000560467 RBM41Q96IZ5 413 aaKnown RBP12.18□□□□□ -0.46
LDLR-212ENST00000560467 SPACA7Q96KW9 195 aa12.18□□□□□ -0.46
LDLR-212ENST00000560467 SLC2A13Q96QE2 648 aa12.18□□□□□ -0.46
LDLR-212ENST00000560467 PNKPQ96T60 521 aa12.18□□□□□ -0.46
LDLR-212ENST00000560467 TBCBQ99426 244 aa12.18□□□□□ -0.46
LDLR-212ENST00000560467 MAK16Q9BXY0 300 aaKnown RBP12.18□□□□□ -0.46
LDLR-212ENST00000560467 ARHGEF4Q9NR80 690 aa12.18□□□□□ -0.46
LDLR-212ENST00000560467 GON4LQ3T8J9 2241 aa12.18□□□□□ -0.46
LDLR-212ENST00000560467 SYNJ2BP-COX16A0A087WUM0 186 aa12.17□□□□□ -0.46
LDLR-212ENST00000560467 GOLGA6L10A0A0M3HER8 536 aa12.17□□□□□ -0.46
LDLR-212ENST00000560467 TMEM8BA6NDV4 472 aa12.17□□□□□ -0.46
LDLR-212ENST00000560467 SRRM3A6NNA2 597 aaPredicted RBP12.17□□□□□ -0.46
LDLR-212ENST00000560467 SLC9A3R1O14745 358 aaPredicted RBP12.17□□□□□ -0.46
LDLR-212ENST00000560467 CEP104O60308 925 aa12.17□□□□□ -0.46
LDLR-212ENST00000560467 ADH1CP00326 375 aa12.17□□□□□ -0.46
LDLR-212ENST00000560467 CFIP05156 583 aa12.17□□□□□ -0.46
LDLR-212ENST00000560467 MBL2P11226 248 aaPredicted RBP12.17□□□□□ -0.46
LDLR-212ENST00000560467 ADH5P11766 374 aa12.17□□□□□ -0.46
LDLR-212ENST00000560467 ITPKAP23677 461 aa12.17□□□□□ -0.46
LDLR-212ENST00000560467 GJC1P36383 396 aa12.17□□□□□ -0.46
LDLR-212ENST00000560467 FLT3P36888 993 aa12.17□□□□□ -0.46
LDLR-212ENST00000560467 KIR2DL1P43626 348 aaPredicted RBP12.17□□□□□ -0.46
LDLR-212ENST00000560467 LMAN2Q12907 356 aa12.17□□□□□ -0.46
LDLR-212ENST00000560467 NME3Q13232 169 aa12.17□□□□□ -0.46
LDLR-212ENST00000560467 KRT81Q14533 505 aa12.17□□□□□ -0.46
LDLR-212ENST00000560467 HECTD3Q5T447 861 aa12.17□□□□□ -0.46
LDLR-212ENST00000560467 LYSMD4Q5XG99 296 aa12.17□□□□□ -0.46
LDLR-212ENST00000560467 CCDC70Q6NSX1 233 aa12.17□□□□□ -0.46
LDLR-212ENST00000560467 SYT12Q8IV01 421 aa12.17□□□□□ -0.46
LDLR-212ENST00000560467 PHTF2Q8N3S3 785 aa12.17□□□□□ -0.46
LDLR-212ENST00000560467 DEFB119Q8N690 84 aa12.17□□□□□ -0.46
LDLR-212ENST00000560467 CEP112Q8N8E3 955 aa12.17□□□□□ -0.46
LDLR-212ENST00000560467 EDEM1Q92611 657 aa12.17□□□□□ -0.46
LDLR-212ENST00000560467 CFAP57Q96MR6 1250 aa12.17□□□□□ -0.46
LDLR-212ENST00000560467 SERPINB11Q96P15 392 aa12.17□□□□□ -0.46
LDLR-212ENST00000560467 OSBPL9Q96SU4 736 aa12.17□□□□□ -0.46
LDLR-212ENST00000560467 TLR10Q9BXR5 811 aa12.17□□□□□ -0.46
LDLR-212ENST00000560467 NUSAP1Q9BXS6 441 aaKnown RBP12.17□□□□□ -0.46
LDLR-212ENST00000560467 CARD9Q9H257 536 aa12.17□□□□□ -0.46
LDLR-212ENST00000560467 ZWILCHQ9H900 591 aa12.17□□□□□ -0.46
LDLR-212ENST00000560467 POLMQ9NP87 494 aaPredicted RBP12.17□□□□□ -0.46
LDLR-212ENST00000560467 DDIT4Q9NX09 232 aa12.17□□□□□ -0.46
LDLR-212ENST00000560467 IL37Q9NZH6 218 aa12.17□□□□□ -0.46
LDLR-212ENST00000560467 COX16Q9P0S2 106 aa12.17□□□□□ -0.46
LDLR-212ENST00000560467 PCSK1NQ9UHG2 260 aa12.17□□□□□ -0.46
LDLR-212ENST00000560467 CDC23Q9UJX2 597 aa12.17□□□□□ -0.46
LDLR-212ENST00000560467 KLK13Q9UKR3 277 aa12.17□□□□□ -0.46
LDLR-212ENST00000560467 NAALADL1Q9UQQ1 740 aa12.17□□□□□ -0.46
LDLR-212ENST00000560467 ASCC3Q8N3C0 2202 aaKnown RBP12.17□□□□□ -0.46
LDLR-212ENST00000560467 DENND4CQ5VZ89 1909 aa12.16□□□□□ -0.46
LDLR-212ENST00000560467 A0A1W2PQH9 124 aa12.16□□□□□ -0.46
LDLR-212ENST00000560467 GABBR2O75899 941 aa12.16□□□□□ -0.46
LDLR-212ENST00000560467 RARGP13631 454 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms