RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 TMEM35BQ8NCS4 154 aa18.28■□□□□ 0.52
HDDC3-205ENST00000559898 STK33Q9BYT3 514 aa18.28■□□□□ 0.52
HDDC3-205ENST00000559898 MAGEB5Q9BZ81 275 aa18.28■□□□□ 0.52
HDDC3-205ENST00000559898 TKTL2Q9H0I9 626 aa18.28■□□□□ 0.52
HDDC3-205ENST00000559898 NEUROG2Q9H2A3 272 aa18.28■□□□□ 0.52
HDDC3-205ENST00000559898 HSD3B7Q9H2F3 369 aa18.28■□□□□ 0.52
HDDC3-205ENST00000559898 NLRC4Q9NPP4 1024 aa18.28■□□□□ 0.52
HDDC3-205ENST00000559898 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.28■□□□□ 0.52
HDDC3-205ENST00000559898 NOCTQ9UK39 431 aaKnown RBP18.28■□□□□ 0.52
HDDC3-205ENST00000559898 FNDC3AQ9Y2H6 1198 aaKnown RBP18.28■□□□□ 0.52
HDDC3-205ENST00000559898 CEP83Q9Y592 693 aa18.28■□□□□ 0.52
HDDC3-205ENST00000559898 OR51B4Q9Y5P0 310 aa18.28■□□□□ 0.52
HDDC3-205ENST00000559898 DOCK4Q8N1I0 1966 aa18.28■□□□□ 0.52
HDDC3-205ENST00000559898 C1QTNF9BB2RNN3 333 aa18.27■□□□□ 0.52
HDDC3-205ENST00000559898 C1QTNF9P0C862 333 aa18.27■□□□□ 0.52
HDDC3-205ENST00000559898 EEF1GP26641 437 aaKnown RBP18.27■□□□□ 0.52
HDDC3-205ENST00000559898 CXCR3P49682 368 aa18.27■□□□□ 0.52
HDDC3-205ENST00000559898 POLR2FP61218 127 aaKnown RBP18.27■□□□□ 0.52
HDDC3-205ENST00000559898 ST8SIA6P61647 398 aa18.27■□□□□ 0.52
HDDC3-205ENST00000559898 NOMO3P69849 1222 aa18.27■□□□□ 0.52
HDDC3-205ENST00000559898 CST6Q15828 149 aa18.27■□□□□ 0.52
HDDC3-205ENST00000559898 FAM102AQ5T9C2 384 aaPredicted RBP18.27■□□□□ 0.52
HDDC3-205ENST00000559898 HDDC3Q8N4P3 179 aa18.27■□□□□ 0.52
HDDC3-205ENST00000559898 EMC1Q8N766 993 aa18.27■□□□□ 0.52
HDDC3-205ENST00000559898 FRS2Q8WU20 508 aa18.27■□□□□ 0.52
HDDC3-205ENST00000559898 NT5C3BQ969T7 300 aa18.27■□□□□ 0.52
HDDC3-205ENST00000559898 C18orf8Q96DM3 657 aa18.27■□□□□ 0.52
HDDC3-205ENST00000559898 NOX5Q96PH1 765 aa18.27■□□□□ 0.52
HDDC3-205ENST00000559898 PSMB7Q99436 277 aa18.27■□□□□ 0.52
HDDC3-205ENST00000559898 BTBD1Q9H0C5 482 aa18.27■□□□□ 0.52
HDDC3-205ENST00000559898 PDCL3Q9H2J4 239 aa18.27■□□□□ 0.52
HDDC3-205ENST00000559898 TM9SF3Q9HD45 589 aa18.27■□□□□ 0.52
HDDC3-205ENST00000559898 FAM207AQ9NSI2 230 aaPredicted RBP18.27■□□□□ 0.52
HDDC3-205ENST00000559898 FBXL12Q9NXK8 326 aa18.27■□□□□ 0.52
HDDC3-205ENST00000559898 ARHGEF38Q9NXL2 777 aa18.27■□□□□ 0.52
HDDC3-205ENST00000559898 SUSD2Q9UGT4 822 aa18.27■□□□□ 0.52
HDDC3-205ENST00000559898 SARDHQ9UL12 918 aa18.27■□□□□ 0.52
HDDC3-205ENST00000559898 SIK3Q9Y2K2 1263 aa18.27■□□□□ 0.52
HDDC3-205ENST00000559898 A0A1B0GVM2 712 aa18.26■□□□□ 0.51
HDDC3-205ENST00000559898 TCAF2A6NFQ2 919 aa18.26■□□□□ 0.51
HDDC3-205ENST00000559898 HYAL3O43820 417 aaPredicted RBP18.26■□□□□ 0.51
HDDC3-205ENST00000559898 SNAP91O60641 907 aa18.26■□□□□ 0.51
HDDC3-205ENST00000559898 SRPRAP08240 638 aaKnown RBP18.26■□□□□ 0.51
HDDC3-205ENST00000559898 SYPP08247 313 aa18.26■□□□□ 0.51
HDDC3-205ENST00000559898 GNSP15586 552 aa18.26■□□□□ 0.51
HDDC3-205ENST00000559898 GALCP54803 685 aa18.26■□□□□ 0.51
HDDC3-205ENST00000559898 JAM2P57087 298 aa18.26■□□□□ 0.51
HDDC3-205ENST00000559898 SIM1P81133 766 aaPredicted RBP18.26■□□□□ 0.51
HDDC3-205ENST00000559898 FMO1Q01740 532 aa18.26■□□□□ 0.51
HDDC3-205ENST00000559898 E2F5Q15329 346 aa18.26■□□□□ 0.51
HDDC3-205ENST00000559898 KIF19Q2TAC6 998 aa18.26■□□□□ 0.51
HDDC3-205ENST00000559898 POM121L1PQ3SYA9 428 aa18.26■□□□□ 0.51
HDDC3-205ENST00000559898 RABEPKQ7Z6M1 372 aa18.26■□□□□ 0.51
HDDC3-205ENST00000559898 ERICH1Q86X53 443 aa18.26■□□□□ 0.51
HDDC3-205ENST00000559898 SLC30A5Q8TAD4 765 aa18.26■□□□□ 0.51
HDDC3-205ENST00000559898 GANCQ8TET4 914 aa18.26■□□□□ 0.51
HDDC3-205ENST00000559898 CFAP57Q96MR6 1250 aa18.26■□□□□ 0.51
HDDC3-205ENST00000559898 PCDHB18PQ96TA0 734 aa18.26■□□□□ 0.51
HDDC3-205ENST00000559898 FEM1AQ9BSK4 669 aa18.26■□□□□ 0.51
HDDC3-205ENST00000559898 TMEM121BQ9BXQ6 578 aaPredicted RBP18.26■□□□□ 0.51
HDDC3-205ENST00000559898 GAREM1Q9H706 876 aa18.26■□□□□ 0.51
HDDC3-205ENST00000559898 MPP6Q9NZW5 540 aa18.26■□□□□ 0.51
HDDC3-205ENST00000559898 SLC12A6Q9UHW9 1150 aa18.26■□□□□ 0.51
HDDC3-205ENST00000559898 TMEM59LQ9UK28 342 aa18.26■□□□□ 0.51
HDDC3-205ENST00000559898 SNX11Q9Y5W9 270 aa18.26■□□□□ 0.51
HDDC3-205ENST00000559898 ASPMQ8IZT6 3477 aa18.26■□□□□ 0.51
HDDC3-205ENST00000559898 WDFY3Q8IZQ1 3526 aa18.25■□□□□ 0.51
HDDC3-205ENST00000559898 KNL1Q8NG31 2342 aa18.25■□□□□ 0.51
HDDC3-205ENST00000559898 EDDM13A0A1B0GTR0 161 aa18.25■□□□□ 0.51
HDDC3-205ENST00000559898 UPK3BL1B0FP48 263 aa18.25■□□□□ 0.51
HDDC3-205ENST00000559898 C10orf142B7Z368 130 aa18.25■□□□□ 0.51
HDDC3-205ENST00000559898 UPK3BL2E5RIL1 263 aa18.25■□□□□ 0.51
HDDC3-205ENST00000559898 RNASEH2AO75792 299 aaKnown RBP18.25■□□□□ 0.51
HDDC3-205ENST00000559898 MT-CO1P00395 513 aa18.25■□□□□ 0.51
HDDC3-205ENST00000559898 SLC2A3P11169 496 aa18.25■□□□□ 0.51
HDDC3-205ENST00000559898 GLDCP23378 1020 aa18.25■□□□□ 0.51
HDDC3-205ENST00000559898 SLC8A1P32418 973 aa18.25■□□□□ 0.51
HDDC3-205ENST00000559898 DRD3P35462 400 aa18.25■□□□□ 0.51
HDDC3-205ENST00000559898 PLK1P53350 603 aa18.25■□□□□ 0.51
HDDC3-205ENST00000559898 COPB1P53618 953 aaKnown RBP18.25■□□□□ 0.51
HDDC3-205ENST00000559898 BPIFB4P59827 614 aa18.25■□□□□ 0.51
HDDC3-205ENST00000559898 DEUP1Q05D60 604 aa18.25■□□□□ 0.51
HDDC3-205ENST00000559898 ARID5BQ14865 1188 aa18.25■□□□□ 0.51
HDDC3-205ENST00000559898 NCAPHQ15003 741 aa18.25■□□□□ 0.51
HDDC3-205ENST00000559898 HLA-BQ31612 363 aa18.25■□□□□ 0.51
HDDC3-205ENST00000559898 C5orf22Q49AR2 442 aa18.25■□□□□ 0.51
HDDC3-205ENST00000559898 RABGAP1LQ5R372 815 aa18.25■□□□□ 0.51
HDDC3-205ENST00000559898 RNF219Q5W0B1 726 aaPredicted RBP18.25■□□□□ 0.51
HDDC3-205ENST00000559898 NCEH1Q6PIU2 408 aa18.25■□□□□ 0.51
HDDC3-205ENST00000559898 APTXQ7Z2E3 356 aaKnown RBP18.25■□□□□ 0.51
HDDC3-205ENST00000559898 BNIPLQ7Z465 357 aa18.25■□□□□ 0.51
HDDC3-205ENST00000559898 CCDC117Q8IWD4 279 aaPredicted RBP18.25■□□□□ 0.51
HDDC3-205ENST00000559898 ZNF557Q8N988 423 aaPredicted RBP18.25■□□□□ 0.51
HDDC3-205ENST00000559898 JOSD2Q8TAC2 188 aa18.25■□□□□ 0.51
HDDC3-205ENST00000559898 SCNM1Q9BWG6 230 aa18.25■□□□□ 0.51
HDDC3-205ENST00000559898 FBRSQ9HAH7 460 aa18.25■□□□□ 0.51
HDDC3-205ENST00000559898 METTL5Q9NRN9 209 aaKnown RBP18.25■□□□□ 0.51
HDDC3-205ENST00000559898 KLK13Q9UKR3 277 aa18.25■□□□□ 0.51
HDDC3-205ENST00000559898 EPG5Q9HCE0 2579 aa18.25■□□□□ 0.51
HDDC3-205ENST00000559898 USP24Q9UPU5 2620 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms