RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 OXTRP30559 389 aa8.43□□□□□ -1.06
SNX1-207ENST00000559401 MAPK8P45983 427 aa8.43□□□□□ -1.06
SNX1-207ENST00000559401 ATXN3P54252 364 aaPredicted RBP8.43□□□□□ -1.06
SNX1-207ENST00000559401 CDH4P55283 916 aa8.43□□□□□ -1.06
SNX1-207ENST00000559401 FANCCQ00597 558 aa8.43□□□□□ -1.06
SNX1-207ENST00000559401 SULT2A1Q06520 285 aa8.43□□□□□ -1.06
SNX1-207ENST00000559401 SKOR2Q2VWA4 1001 aaPredicted RBP8.43□□□□□ -1.06
SNX1-207ENST00000559401 HNRNPA1L2Q32P51 320 aaKnown RBP8.43□□□□□ -1.06
SNX1-207ENST00000559401 UAP1L1Q3KQV9 507 aa8.43□□□□□ -1.06
SNX1-207ENST00000559401 ZSCAN23Q3MJ62 389 aa8.43□□□□□ -1.06
SNX1-207ENST00000559401 ACCSLQ4AC99 568 aa8.43□□□□□ -1.06
SNX1-207ENST00000559401 WDR45BQ5MNZ6 344 aa8.43□□□□□ -1.06
SNX1-207ENST00000559401 STPG1Q5TH74 334 aa8.43□□□□□ -1.06
SNX1-207ENST00000559401 SFMBT2Q5VUG0 894 aa8.43□□□□□ -1.06
SNX1-207ENST00000559401 CXorf57Q6NSI4 855 aaKnown RBP8.43□□□□□ -1.06
SNX1-207ENST00000559401 DCUN1D2Q6PH85 259 aa8.43□□□□□ -1.06
SNX1-207ENST00000559401 ERMP1Q7Z2K6 904 aa8.43□□□□□ -1.06
SNX1-207ENST00000559401 METTL3Q86U44 580 aaKnown RBP8.43□□□□□ -1.06
SNX1-207ENST00000559401 SLC41A1Q8IVJ1 513 aa8.43□□□□□ -1.06
SNX1-207ENST00000559401 BAP1Q92560 729 aa8.43□□□□□ -1.06
SNX1-207ENST00000559401 FOXJ1Q92949 421 aa8.43□□□□□ -1.06
SNX1-207ENST00000559401 NT5C3BQ969T7 300 aa8.43□□□□□ -1.06
SNX1-207ENST00000559401 LMLNQ96KR4 655 aa8.43□□□□□ -1.06
SNX1-207ENST00000559401 MRGPRX3Q96LB0 322 aa8.43□□□□□ -1.06
SNX1-207ENST00000559401 NAP1L5Q96NT1 182 aaPredicted RBP8.43□□□□□ -1.06
SNX1-207ENST00000559401 MCEEQ96PE7 176 aa8.43□□□□□ -1.06
SNX1-207ENST00000559401 NUP58Q9BVL2 599 aa8.43□□□□□ -1.06
SNX1-207ENST00000559401 GTPBP2Q9BX10 602 aaKnown RBP8.43□□□□□ -1.06
SNX1-207ENST00000559401 MIR1-1HGQ9H1L0 117 aa8.43□□□□□ -1.06
SNX1-207ENST00000559401 ANLNQ9NQW6 1124 aa8.43□□□□□ -1.06
SNX1-207ENST00000559401 ITM2CQ9NQX7 267 aa8.43□□□□□ -1.06
SNX1-207ENST00000559401 TMEM74BQ9NUR3 256 aa8.43□□□□□ -1.06
SNX1-207ENST00000559401 TMEM51Q9NW97 253 aa8.43□□□□□ -1.06
SNX1-207ENST00000559401 MPP6Q9NZW5 540 aa8.43□□□□□ -1.06
SNX1-207ENST00000559401 USP36Q9P275 1121 aaKnown RBP8.43□□□□□ -1.06
SNX1-207ENST00000559401 SLCO3A1Q9UIG8 710 aa8.43□□□□□ -1.06
SNX1-207ENST00000559401 MYO6Q9UM54 1294 aa8.43□□□□□ -1.06
SNX1-207ENST00000559401 NCKAP1Q9Y2A7 1128 aa8.43□□□□□ -1.06
SNX1-207ENST00000559401 FAM47DPA6NHR8 397 aa8.42□□□□□ -1.06
SNX1-207ENST00000559401 C2CD4BA6NLJ0 364 aa8.42□□□□□ -1.06
SNX1-207ENST00000559401 C4orf47A7E2U8 309 aa8.42□□□□□ -1.06
SNX1-207ENST00000559401 I6L893 689 aaPredicted RBP8.42□□□□□ -1.06
SNX1-207ENST00000559401 ATMINO43313 823 aaPredicted RBP8.42□□□□□ -1.06
SNX1-207ENST00000559401 GNSP15586 552 aa8.42□□□□□ -1.06
SNX1-207ENST00000559401 MAOBP27338 520 aa8.42□□□□□ -1.06
SNX1-207ENST00000559401 OR1E1P30953 314 aa8.42□□□□□ -1.06
SNX1-207ENST00000559401 RFC1P35251 1148 aaPredicted RBP8.42□□□□□ -1.06
SNX1-207ENST00000559401 HOXD12P35452 270 aa8.42□□□□□ -1.06
SNX1-207ENST00000559401 PTPN9P43378 593 aa8.42□□□□□ -1.06
SNX1-207ENST00000559401 PSMD8P48556 350 aa8.42□□□□□ -1.06
SNX1-207ENST00000559401 UBASH3AP57075 661 aa8.42□□□□□ -1.06
SNX1-207ENST00000559401 RPS14P62263 151 aaKnown RBP8.42□□□□□ -1.06
SNX1-207ENST00000559401 KRT83P78385 493 aa8.42□□□□□ -1.06
SNX1-207ENST00000559401 IRX4P78413 519 aa8.42□□□□□ -1.06
SNX1-207ENST00000559401 C1QBPQ07021 282 aaKnown RBP8.42□□□□□ -1.06
SNX1-207ENST00000559401 KLHL30Q0D2K2 578 aa8.42□□□□□ -1.06
SNX1-207ENST00000559401 PTP4A2Q12974 167 aa8.42□□□□□ -1.06
SNX1-207ENST00000559401 DUOXA1Q1HG43 343 aa8.42□□□□□ -1.06
SNX1-207ENST00000559401 CCDC14Q49A88 953 aa8.42□□□□□ -1.06
SNX1-207ENST00000559401 RAB6CQ53S08 254 aa8.42□□□□□ -1.06
SNX1-207ENST00000559401 ALFQ53S48 1182 aa8.42□□□□□ -1.06
SNX1-207ENST00000559401 TDRD12Q587J7 1177 aaKnown RBP8.42□□□□□ -1.06
SNX1-207ENST00000559401 C6orf118Q5T5N4 469 aa8.42□□□□□ -1.06
SNX1-207ENST00000559401 ACBD5Q5T8D3 534 aaPredicted RBP8.42□□□□□ -1.06
SNX1-207ENST00000559401 SH3PXD2AQ5TCZ1 1133 aa8.42□□□□□ -1.06
SNX1-207ENST00000559401 DCAF12L1Q5VU92 463 aa8.42□□□□□ -1.06
SNX1-207ENST00000559401 RWDD4Q6NW29 188 aaKnown RBP8.42□□□□□ -1.06
SNX1-207ENST00000559401 PPP1R2P3Q6NXS1 205 aa8.42□□□□□ -1.06
SNX1-207ENST00000559401 SCYL2Q6P3W7 929 aa8.42□□□□□ -1.06
SNX1-207ENST00000559401 WDR59Q6PJI9 974 aa8.42□□□□□ -1.06
SNX1-207ENST00000559401 MON1BQ7L1V2 547 aa8.42□□□□□ -1.06
SNX1-207ENST00000559401 ARCQ7LC44 396 aa8.42□□□□□ -1.06
SNX1-207ENST00000559401 RABEPKQ7Z6M1 372 aa8.42□□□□□ -1.06
SNX1-207ENST00000559401 PHF13Q86YI8 300 aaPredicted RBP8.42□□□□□ -1.06
SNX1-207ENST00000559401 MMAAQ8IVH4 418 aaKnown RBP8.42□□□□□ -1.06
SNX1-207ENST00000559401 DRC7Q8IY82 874 aa8.42□□□□□ -1.06
SNX1-207ENST00000559401 KDM1BQ8NB78 822 aa8.42□□□□□ -1.06
SNX1-207ENST00000559401 C3orf20Q8ND61 904 aa8.42□□□□□ -1.06
SNX1-207ENST00000559401 OR52K2Q8NGK3 314 aa8.42□□□□□ -1.06
SNX1-207ENST00000559401 CEP76Q8TAP6 659 aa8.42□□□□□ -1.06
SNX1-207ENST00000559401 FAM172AQ8WUF8 416 aa8.42□□□□□ -1.06
SNX1-207ENST00000559401 MYO19Q96H55 970 aa8.42□□□□□ -1.06
SNX1-207ENST00000559401 HAPLN3Q96S86 360 aa8.42□□□□□ -1.06
SNX1-207ENST00000559401 OMDQ99983 421 aa8.42□□□□□ -1.06
SNX1-207ENST00000559401 SPON2Q9BUD6 331 aa8.42□□□□□ -1.06
SNX1-207ENST00000559401 C2orf49Q9BVC5 232 aaPredicted RBP8.42□□□□□ -1.06
SNX1-207ENST00000559401 BTBD1Q9H0C5 482 aa8.42□□□□□ -1.06
SNX1-207ENST00000559401 RAB6CQ9H0N0 254 aa8.42□□□□□ -1.06
SNX1-207ENST00000559401 HAUS4Q9H6D7 363 aa8.42□□□□□ -1.06
SNX1-207ENST00000559401 TMEM9BQ9NQ34 198 aa8.42□□□□□ -1.06
SNX1-207ENST00000559401 FSCN3Q9NQT6 498 aa8.42□□□□□ -1.06
SNX1-207ENST00000559401 WSB2Q9NYS7 404 aaPredicted RBP8.42□□□□□ -1.06
SNX1-207ENST00000559401 SUSD2Q9UGT4 822 aa8.42□□□□□ -1.06
SNX1-207ENST00000559401 PILRBQ9UKJ0 227 aa8.42□□□□□ -1.06
SNX1-207ENST00000559401 DOCK4Q8N1I0 1966 aa8.42□□□□□ -1.06
SNX1-207ENST00000559401 ITIH6Q6UXX5 1313 aa8.41□□□□□ -1.06
SNX1-207ENST00000559401 A0A1W2PP55 124 aa8.41□□□□□ -1.06
SNX1-207ENST00000559401 TARSL2A2RTX5 802 aaKnown RBP8.41□□□□□ -1.06
SNX1-207ENST00000559401 CBX4O00257 560 aa8.41□□□□□ -1.06
SNX1-207ENST00000559401 MID1O15344 667 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms