RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 KRT83P78385 493 aa8.73□□□□□ -1.01
TPM1-213ENST00000558400 ECT2LQ008S8 904 aa8.73□□□□□ -1.01
TPM1-213ENST00000558400 SLC20A2Q08357 652 aa8.73□□□□□ -1.01
TPM1-213ENST00000558400 MAMLD1Q13495 774 aa8.73□□□□□ -1.01
TPM1-213ENST00000558400 CAMK2GQ13555 558 aaPredicted RBP8.73□□□□□ -1.01
TPM1-213ENST00000558400 PLEKHG6Q3KR16 790 aa8.73□□□□□ -1.01
TPM1-213ENST00000558400 PLK5Q496M5 336 aa8.73□□□□□ -1.01
TPM1-213ENST00000558400 TDRD12Q587J7 1177 aaKnown RBP8.73□□□□□ -1.01
TPM1-213ENST00000558400 FSCBQ5H9T9 825 aa8.73□□□□□ -1.01
TPM1-213ENST00000558400 PITRM1Q5JRX3 1037 aa8.73□□□□□ -1.01
TPM1-213ENST00000558400 C6orf118Q5T5N4 469 aa8.73□□□□□ -1.01
TPM1-213ENST00000558400 OTUD1Q5VV17 481 aaPredicted RBP8.73□□□□□ -1.01
TPM1-213ENST00000558400 PLEKHA7Q6IQ23 1121 aa8.73□□□□□ -1.01
TPM1-213ENST00000558400 ZNF783Q6ZMS7 281 aa8.73□□□□□ -1.01
TPM1-213ENST00000558400 LPCAT2Q7L5N7 544 aa8.73□□□□□ -1.01
TPM1-213ENST00000558400 SLFN11Q7Z7L1 901 aa8.73□□□□□ -1.01
TPM1-213ENST00000558400 PHLDB2Q86SQ0 1253 aa8.73□□□□□ -1.01
TPM1-213ENST00000558400 KBTBD6Q86V97 674 aa8.73□□□□□ -1.01
TPM1-213ENST00000558400 FAM131BQ86XD5 332 aa8.73□□□□□ -1.01
TPM1-213ENST00000558400 DCLK2Q8N568 766 aa8.73□□□□□ -1.01
TPM1-213ENST00000558400 FAM160A2Q8N612 972 aaPredicted RBP8.73□□□□□ -1.01
TPM1-213ENST00000558400 OR2T3Q8NH03 318 aa8.73□□□□□ -1.01
TPM1-213ENST00000558400 FNIP1Q8TF40 1166 aa8.73□□□□□ -1.01
TPM1-213ENST00000558400 PRCCQ92733 491 aaPredicted RBP8.73□□□□□ -1.01
TPM1-213ENST00000558400 IGSF8Q969P0 613 aa8.73□□□□□ -1.01
TPM1-213ENST00000558400 NTAN1Q96AB6 310 aa8.73□□□□□ -1.01
TPM1-213ENST00000558400 SIPA1Q96FS4 1042 aa8.73□□□□□ -1.01
TPM1-213ENST00000558400 MRGPRX1Q96LB2 322 aa8.73□□□□□ -1.01
TPM1-213ENST00000558400 EIF3CQ99613 913 aaKnown RBP8.73□□□□□ -1.01
TPM1-213ENST00000558400 FEM1AQ9BSK4 669 aa8.73□□□□□ -1.01
TPM1-213ENST00000558400 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.73□□□□□ -1.01
TPM1-213ENST00000558400 TPSD1Q9BZJ3 242 aa8.73□□□□□ -1.01
TPM1-213ENST00000558400 DUSP15Q9H1R2 295 aaPredicted RBP8.73□□□□□ -1.01
TPM1-213ENST00000558400 CD248Q9HCU0 757 aa8.73□□□□□ -1.01
TPM1-213ENST00000558400 ZDHHC4Q9NPG8 344 aa8.73□□□□□ -1.01
TPM1-213ENST00000558400 ITM2CQ9NQX7 267 aa8.73□□□□□ -1.01
TPM1-213ENST00000558400 CALCOCO1Q9P1Z2 691 aa8.73□□□□□ -1.01
TPM1-213ENST00000558400 RALYQ9UKM9 306 aaKnown RBP8.73□□□□□ -1.01
TPM1-213ENST00000558400 SCML1Q9UN30 329 aa8.73□□□□□ -1.01
TPM1-213ENST00000558400 ERVW-1Q9UQF0 538 aa8.73□□□□□ -1.01
TPM1-213ENST00000558400 SCINQ9Y6U3 715 aa8.73□□□□□ -1.01
TPM1-213ENST00000558400 CXorf51AA0A1B0GTR3 108 aa8.72□□□□□ -1.01
TPM1-213ENST00000558400 ILVBLA1L0T0 632 aa8.72□□□□□ -1.01
TPM1-213ENST00000558400 TMCO5BA8MYB1 307 aa8.72□□□□□ -1.01
TPM1-213ENST00000558400 PRR5-ARHGAP8B1AHC4 643 aa8.72□□□□□ -1.01
TPM1-213ENST00000558400 E9PAM4 449 aa8.72□□□□□ -1.01
TPM1-213ENST00000558400 DDX3XO00571 662 aaKnown RBP eCLIP8.72□□□□□ -1.01
TPM1-213ENST00000558400 AP5Z1O43299 807 aa8.72□□□□□ -1.01
TPM1-213ENST00000558400 NDUFS2O75306 463 aa8.72□□□□□ -1.01
TPM1-213ENST00000558400 GYPCP04921 128 aa8.72□□□□□ -1.01
TPM1-213ENST00000558400 ADRB1P08588 477 aa8.72□□□□□ -1.01
TPM1-213ENST00000558400 NDUFV2P19404 249 aa8.72□□□□□ -1.01
TPM1-213ENST00000558400 OR1E1P30953 314 aa8.72□□□□□ -1.01
TPM1-213ENST00000558400 CASP14P31944 242 aa8.72□□□□□ -1.01
TPM1-213ENST00000558400 L1CAMP32004 1257 aa8.72□□□□□ -1.01
TPM1-213ENST00000558400 HTR7P34969 479 aa8.72□□□□□ -1.01
TPM1-213ENST00000558400 ETFBP38117 255 aa8.72□□□□□ -1.01
TPM1-213ENST00000558400 ATXN1P54253 815 aaKnown RBP8.72□□□□□ -1.01
TPM1-213ENST00000558400 RPL7AP62424 266 aaKnown RBP8.72□□□□□ -1.01
TPM1-213ENST00000558400 ARHGAP8P85298 464 aa8.72□□□□□ -1.01
TPM1-213ENST00000558400 SCAPQ12770 1279 aa8.72□□□□□ -1.01
TPM1-213ENST00000558400 SRSF5Q13243 272 aaKnown RBP8.72□□□□□ -1.01
TPM1-213ENST00000558400 CSRP2Q16527 193 aa8.72□□□□□ -1.01
TPM1-213ENST00000558400 LPAL2Q16609 132 aa8.72□□□□□ -1.01
TPM1-213ENST00000558400 PTPRNQ16849 979 aa8.72□□□□□ -1.01
TPM1-213ENST00000558400 CDO1Q16878 200 aa8.72□□□□□ -1.01
TPM1-213ENST00000558400 C15orf59Q2T9L4 293 aaPredicted RBP8.72□□□□□ -1.01
TPM1-213ENST00000558400 HNRNPA1L2Q32P51 320 aaKnown RBP8.72□□□□□ -1.01
TPM1-213ENST00000558400 MAP7D1Q3KQU3 841 aa8.72□□□□□ -1.01
TPM1-213ENST00000558400 FUT11Q495W5 492 aa8.72□□□□□ -1.01
TPM1-213ENST00000558400 PPP1R15BQ5SWA1 713 aa8.72□□□□□ -1.01
TPM1-213ENST00000558400 HGSNATQ68CP4 663 aa8.72□□□□□ -1.01
TPM1-213ENST00000558400 TRNP1Q6NT89 227 aa8.72□□□□□ -1.01
TPM1-213ENST00000558400 KIAA1211LQ6NV74 962 aa8.72□□□□□ -1.01
TPM1-213ENST00000558400 SCYL2Q6P3W7 929 aa8.72□□□□□ -1.01
TPM1-213ENST00000558400 ALKBH5Q6P6C2 394 aaKnown RBP8.72□□□□□ -1.01
TPM1-213ENST00000558400 C14orf80Q86SX3 495 aa8.72□□□□□ -1.01
TPM1-213ENST00000558400 RNF214Q8ND24 703 aa8.72□□□□□ -1.01
TPM1-213ENST00000558400 JOSD2Q8TAC2 188 aa8.72□□□□□ -1.01
TPM1-213ENST00000558400 WFDC5Q8TCV5 224 aa8.72□□□□□ -1.01
TPM1-213ENST00000558400 FAM172AQ8WUF8 416 aa8.72□□□□□ -1.01
TPM1-213ENST00000558400 CYB5D2Q8WUJ1 264 aa8.72□□□□□ -1.01
TPM1-213ENST00000558400 SORCS1Q8WY21 1168 aa8.72□□□□□ -1.01
TPM1-213ENST00000558400 FOXJ1Q92949 421 aa8.72□□□□□ -1.01
TPM1-213ENST00000558400 RNF25Q96BH1 459 aaPredicted RBP8.72□□□□□ -1.01
TPM1-213ENST00000558400 MYEOVQ96EZ4 313 aa8.72□□□□□ -1.01
TPM1-213ENST00000558400 MCEEQ96PE7 176 aa8.72□□□□□ -1.01
TPM1-213ENST00000558400 C2orf49Q9BVC5 232 aaPredicted RBP8.72□□□□□ -1.01
TPM1-213ENST00000558400 ADAM33Q9BZ11 813 aa8.72□□□□□ -1.01
TPM1-213ENST00000558400 ZYG11BQ9C0D3 744 aa8.72□□□□□ -1.01
TPM1-213ENST00000558400 MUC3BQ9H195 1237 aa8.72□□□□□ -1.01
TPM1-213ENST00000558400 CNOT8Q9UFF9 292 aaKnown RBP8.72□□□□□ -1.01
TPM1-213ENST00000558400 INTS6Q9UL03 887 aaKnown RBP8.72□□□□□ -1.01
TPM1-213ENST00000558400 RAD54BQ9Y620 910 aa8.72□□□□□ -1.01
TPM1-213ENST00000558400 EDDM13A0A1B0GTR0 161 aa8.71□□□□□ -1.02
TPM1-213ENST00000558400 SSU72P8A0A1W2PR75 194 aa8.71□□□□□ -1.02
TPM1-213ENST00000558400 TMEM191CA6NGB0 347 aa8.71□□□□□ -1.02
TPM1-213ENST00000558400 DCLK1O15075 740 aa8.71□□□□□ -1.02
TPM1-213ENST00000558400 EPN2O95208 641 aa8.71□□□□□ -1.02
TPM1-213ENST00000558400 RHOCP08134 193 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms