RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 SPAG5Q96R06 1193 aa12.28□□□□□ -0.44
HERC1-202ENST00000558324 WDCPQ9H6R7 721 aa12.28□□□□□ -0.44
HERC1-202ENST00000558324 METTL5Q9NRN9 209 aaKnown RBP12.28□□□□□ -0.44
HERC1-202ENST00000558324 FBXL12Q9NXK8 326 aa12.28□□□□□ -0.44
HERC1-202ENST00000558324 RRN3Q9NYV6 651 aa12.28□□□□□ -0.44
HERC1-202ENST00000558324 NOCTQ9UK39 431 aaKnown RBP12.28□□□□□ -0.44
HERC1-202ENST00000558324 VPS28Q9UK41 221 aa12.28□□□□□ -0.44
HERC1-202ENST00000558324 NCKAP1Q9Y2A7 1128 aa12.28□□□□□ -0.44
HERC1-202ENST00000558324 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.28□□□□□ -0.44
HERC1-202ENST00000558324 I6L893 689 aaPredicted RBP12.27□□□□□ -0.45
HERC1-202ENST00000558324 RNASEH2AO75792 299 aaKnown RBP12.27□□□□□ -0.45
HERC1-202ENST00000558324 CNTN5O94779 1100 aa12.27□□□□□ -0.45
HERC1-202ENST00000558324 MBD3O95983 291 aa12.27□□□□□ -0.45
HERC1-202ENST00000558324 ZNF18P17022 549 aa12.27□□□□□ -0.45
HERC1-202ENST00000558324 SPINK2P20155 84 aa12.27□□□□□ -0.45
HERC1-202ENST00000558324 SOX5P35711 763 aa12.27□□□□□ -0.45
HERC1-202ENST00000558324 NNMTP40261 264 aa12.27□□□□□ -0.45
HERC1-202ENST00000558324 CSNK1EP49674 416 aaKnown RBP12.27□□□□□ -0.45
HERC1-202ENST00000558324 CXCR3P49682 368 aa12.27□□□□□ -0.45
HERC1-202ENST00000558324 SLC12A1Q13621 1099 aa12.27□□□□□ -0.45
HERC1-202ENST00000558324 SLC25A52Q3SY17 297 aa12.27□□□□□ -0.45
HERC1-202ENST00000558324 ACCSLQ4AC99 568 aa12.27□□□□□ -0.45
HERC1-202ENST00000558324 BRMS1LQ5PSV4 323 aa12.27□□□□□ -0.45
HERC1-202ENST00000558324 CCDC183Q5T5S1 534 aa12.27□□□□□ -0.45
HERC1-202ENST00000558324 TRNP1Q6NT89 227 aa12.27□□□□□ -0.45
HERC1-202ENST00000558324 LRSAM1Q6UWE0 723 aa12.27□□□□□ -0.45
HERC1-202ENST00000558324 LAYNQ6UX15 382 aa12.27□□□□□ -0.45
HERC1-202ENST00000558324 EMC1Q8N766 993 aa12.27□□□□□ -0.45
HERC1-202ENST00000558324 KDM1BQ8NB78 822 aa12.27□□□□□ -0.45
HERC1-202ENST00000558324 ANKRD20A12PQ8NF67 263 aa12.27□□□□□ -0.45
HERC1-202ENST00000558324 BIRC7Q96CA5 298 aa12.27□□□□□ -0.45
HERC1-202ENST00000558324 CFAP57Q96MR6 1250 aa12.27□□□□□ -0.45
HERC1-202ENST00000558324 CAMK1GQ96NX5 476 aa12.27□□□□□ -0.45
HERC1-202ENST00000558324 OMDQ99983 421 aa12.27□□□□□ -0.45
HERC1-202ENST00000558324 C11orf70Q9BRQ4 267 aa12.27□□□□□ -0.45
HERC1-202ENST00000558324 MUC3BQ9H195 1237 aa12.27□□□□□ -0.45
HERC1-202ENST00000558324 PCED1AQ9H1Q7 454 aa12.27□□□□□ -0.45
HERC1-202ENST00000558324 IL21RQ9HBE5 538 aa12.27□□□□□ -0.45
HERC1-202ENST00000558324 SGK2Q9HBY8 427 aa12.27□□□□□ -0.45
HERC1-202ENST00000558324 ARHGEF38Q9NXL2 777 aa12.27□□□□□ -0.45
HERC1-202ENST00000558324 SLC25A13Q9UJS0 675 aa12.27□□□□□ -0.45
HERC1-202ENST00000558324 SIK3Q9Y2K2 1263 aa12.27□□□□□ -0.45
HERC1-202ENST00000558324 ITIH6Q6UXX5 1313 aa12.27□□□□□ -0.45
HERC1-202ENST00000558324 A0A1B0GVT2 93 aa12.26□□□□□ -0.45
HERC1-202ENST00000558324 TARSL2A2RTX5 802 aaKnown RBP12.26□□□□□ -0.45
HERC1-202ENST00000558324 LGALS16A8MUM7 142 aa12.26□□□□□ -0.45
HERC1-202ENST00000558324 BNIP3LO60238 219 aa12.26□□□□□ -0.45
HERC1-202ENST00000558324 SH3BP5O60239 455 aa12.26□□□□□ -0.45
HERC1-202ENST00000558324 CLDN11O75508 207 aa12.26□□□□□ -0.45
HERC1-202ENST00000558324 TOP3BO95985 862 aaKnown RBP12.26□□□□□ -0.45
HERC1-202ENST00000558324 F9P00740 461 aa12.26□□□□□ -0.45
HERC1-202ENST00000558324 IL1BP01584 269 aa12.26□□□□□ -0.45
HERC1-202ENST00000558324 RHOCP08134 193 aa12.26□□□□□ -0.45
HERC1-202ENST00000558324 CD59P13987 128 aa12.26□□□□□ -0.45
HERC1-202ENST00000558324 CHRNB2P17787 502 aa12.26□□□□□ -0.45
HERC1-202ENST00000558324 CDK11BP21127 795 aaKnown RBP12.26□□□□□ -0.45
HERC1-202ENST00000558324 SLC8A1P32418 973 aa12.26□□□□□ -0.45
HERC1-202ENST00000558324 SCNN1AP37088 669 aa12.26□□□□□ -0.45
HERC1-202ENST00000558324 OXCT1P55809 520 aa12.26□□□□□ -0.45
HERC1-202ENST00000558324 JAM2P57087 298 aa12.26□□□□□ -0.45
HERC1-202ENST00000558324 SIM1P81133 766 aaPredicted RBP12.26□□□□□ -0.45
HERC1-202ENST00000558324 ATP11AP98196 1134 aa12.26□□□□□ -0.45
HERC1-202ENST00000558324 FMO1Q01740 532 aa12.26□□□□□ -0.45
HERC1-202ENST00000558324 CDR2Q01850 454 aa12.26□□□□□ -0.45
HERC1-202ENST00000558324 UBXN1Q04323 297 aa12.26□□□□□ -0.45
HERC1-202ENST00000558324 SULT2A1Q06520 285 aa12.26□□□□□ -0.45
HERC1-202ENST00000558324 MTA1Q13330 715 aa12.26□□□□□ -0.45
HERC1-202ENST00000558324 ELAVL3Q14576 367 aaKnown RBP12.26□□□□□ -0.45
HERC1-202ENST00000558324 ARID5BQ14865 1188 aa12.26□□□□□ -0.45
HERC1-202ENST00000558324 CDO1Q16878 200 aa12.26□□□□□ -0.45
HERC1-202ENST00000558324 POM121L1PQ3SYA9 428 aa12.26□□□□□ -0.45
HERC1-202ENST00000558324 ALFQ53S48 1182 aa12.26□□□□□ -0.45
HERC1-202ENST00000558324 USP30Q70CQ3 517 aa12.26□□□□□ -0.45
HERC1-202ENST00000558324 TFAP2DQ7Z6R9 452 aa12.26□□□□□ -0.45
HERC1-202ENST00000558324 PIP4P1Q86T03 277 aa12.26□□□□□ -0.45
HERC1-202ENST00000558324 FAM131BQ86XD5 332 aa12.26□□□□□ -0.45
HERC1-202ENST00000558324 AADATQ8N5Z0 425 aa12.26□□□□□ -0.45
HERC1-202ENST00000558324 AOPEPQ8N6M6 819 aa12.26□□□□□ -0.45
HERC1-202ENST00000558324 NEK11Q8NG66 645 aa12.26□□□□□ -0.45
HERC1-202ENST00000558324 SLC30A5Q8TAD4 765 aa12.26□□□□□ -0.45
HERC1-202ENST00000558324 PTPRN2Q92932 1015 aa12.26□□□□□ -0.45
HERC1-202ENST00000558324 FAM129BQ96TA1 746 aa12.26□□□□□ -0.45
HERC1-202ENST00000558324 FEM1AQ9BSK4 669 aa12.26□□□□□ -0.45
HERC1-202ENST00000558324 ZDHHC5Q9C0B5 715 aa12.26□□□□□ -0.45
HERC1-202ENST00000558324 NEUROG2Q9H2A3 272 aa12.26□□□□□ -0.45
HERC1-202ENST00000558324 GAREM1Q9H706 876 aa12.26□□□□□ -0.45
HERC1-202ENST00000558324 DNAAF2Q9NVR5 837 aaKnown RBP12.26□□□□□ -0.45
HERC1-202ENST00000558324 MPP6Q9NZW5 540 aa12.26□□□□□ -0.45
HERC1-202ENST00000558324 LIMA1Q9UHB6 759 aaKnown RBP12.26□□□□□ -0.45
HERC1-202ENST00000558324 SCML1Q9UN30 329 aa12.26□□□□□ -0.45
HERC1-202ENST00000558324 PAXBP1Q9Y5B6 917 aa12.26□□□□□ -0.45
HERC1-202ENST00000558324 PLK4O00444 970 aa12.25□□□□□ -0.45
HERC1-202ENST00000558324 SRGAP2O75044 1071 aa12.25□□□□□ -0.45
HERC1-202ENST00000558324 GJB3O75712 270 aa12.25□□□□□ -0.45
HERC1-202ENST00000558324 GJB6O95452 261 aa12.25□□□□□ -0.45
HERC1-202ENST00000558324 IGHV4-34P06331 123 aa12.25□□□□□ -0.45
HERC1-202ENST00000558324 C7P10643 843 aa12.25□□□□□ -0.45
HERC1-202ENST00000558324 RDXP35241 583 aaKnown RBP12.25□□□□□ -0.45
HERC1-202ENST00000558324 STAT1P42224 750 aa12.25□□□□□ -0.45
HERC1-202ENST00000558324 AFF3P51826 1226 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms