RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 PDE1BQ01064 536 aa10.8□□□□□ -0.68
TPM1-210ENST00000558264 BST1Q10588 318 aa10.8□□□□□ -0.68
TPM1-210ENST00000558264 TEX44Q53QW1 395 aa10.8□□□□□ -0.68
TPM1-210ENST00000558264 HSP90AA5PQ58FG0 334 aa10.8□□□□□ -0.68
TPM1-210ENST00000558264 STEAP4Q687X5 459 aa10.8□□□□□ -0.68
TPM1-210ENST00000558264 SLC24A5Q71RS6 500 aa10.8□□□□□ -0.68
TPM1-210ENST00000558264 TFAP2DQ7Z6R9 452 aa10.8□□□□□ -0.68
TPM1-210ENST00000558264 IRGQQ8WZA9 623 aa10.8□□□□□ -0.68
TPM1-210ENST00000558264 HDAC11Q96DB2 347 aa10.8□□□□□ -0.68
TPM1-210ENST00000558264 TBC1D31Q96DN5 1066 aa10.8□□□□□ -0.68
TPM1-210ENST00000558264 CERS2Q96G23 380 aa10.8□□□□□ -0.68
TPM1-210ENST00000558264 PLCD4Q9BRC7 762 aa10.8□□□□□ -0.68
TPM1-210ENST00000558264 TMEM120AQ9BXJ8 343 aa10.8□□□□□ -0.68
TPM1-210ENST00000558264 GBA3Q9H227 469 aa10.8□□□□□ -0.68
TPM1-210ENST00000558264 STARD7Q9NQZ5 370 aa10.8□□□□□ -0.68
TPM1-210ENST00000558264 RGS18Q9NS28 235 aa10.8□□□□□ -0.68
TPM1-210ENST00000558264 TXNDC16Q9P2K2 825 aa10.8□□□□□ -0.68
TPM1-210ENST00000558264 SRRDQ9UH36 339 aa10.8□□□□□ -0.68
TPM1-210ENST00000558264 LAMA3Q16787 3333 aa10.8□□□□□ -0.68
TPM1-210ENST00000558264 A0A1W2PQ45 241 aaPredicted RBP10.8□□□□□ -0.68
TPM1-210ENST00000558264 A0A1W2PQY0 241 aa10.8□□□□□ -0.68
TPM1-210ENST00000558264 TADA2AO75478 443 aa10.8□□□□□ -0.68
TPM1-210ENST00000558264 POLBP06746 335 aa10.8□□□□□ -0.68
TPM1-210ENST00000558264 HMBSP08397 361 aa10.8□□□□□ -0.68
TPM1-210ENST00000558264 ITGA2BP08514 1039 aa10.8□□□□□ -0.68
TPM1-210ENST00000558264 SAT1P21673 171 aa10.8□□□□□ -0.68
TPM1-210ENST00000558264 SERPINB6P35237 376 aa10.8□□□□□ -0.68
TPM1-210ENST00000558264 AIF1P55008 147 aa10.8□□□□□ -0.68
TPM1-210ENST00000558264 NKX3-2P78367 333 aa10.8□□□□□ -0.68
TPM1-210ENST00000558264 PDE1CQ14123 709 aaPredicted RBP10.8□□□□□ -0.68
TPM1-210ENST00000558264 DLG2Q15700 870 aa10.8□□□□□ -0.68
TPM1-210ENST00000558264 TTC7BQ86TV6 843 aa10.8□□□□□ -0.68
TPM1-210ENST00000558264 NUDCD3Q8IVD9 361 aa10.8□□□□□ -0.68
TPM1-210ENST00000558264 GBP7Q8N8V2 638 aaPredicted RBP10.8□□□□□ -0.68
TPM1-210ENST00000558264 ACVR1CQ8NER5 493 aa10.8□□□□□ -0.68
TPM1-210ENST00000558264 CDKL2Q92772 493 aa10.8□□□□□ -0.68
TPM1-210ENST00000558264 FAM193BQ96PV7 902 aaPredicted RBP10.8□□□□□ -0.68
TPM1-210ENST00000558264 TRIM55Q9BYV6 548 aa10.8□□□□□ -0.68
TPM1-210ENST00000558264 HEY2Q9UBP5 337 aa10.8□□□□□ -0.68
TPM1-210ENST00000558264 ZFP69BQ9UJL9 534 aa10.8□□□□□ -0.68
TPM1-210ENST00000558264 LYPLA1O75608 230 aaPredicted RBP10.79□□□□□ -0.68
TPM1-210ENST00000558264 ALDH1A2O94788 518 aa10.79□□□□□ -0.68
TPM1-210ENST00000558264 UNC5CO95185 931 aa10.79□□□□□ -0.68
TPM1-210ENST00000558264 GSTA2P09210 222 aa10.79□□□□□ -0.68
TPM1-210ENST00000558264 MYL2P10916 166 aa10.79□□□□□ -0.68
TPM1-210ENST00000558264 MX2P20592 715 aa10.79□□□□□ -0.68
TPM1-210ENST00000558264 SERPINB3P29508 390 aa10.79□□□□□ -0.68
TPM1-210ENST00000558264 ALDH3A1P30838 453 aa10.79□□□□□ -0.68
TPM1-210ENST00000558264 CCNFP41002 786 aa10.79□□□□□ -0.68
TPM1-210ENST00000558264 HCAR3P49019 387 aa10.79□□□□□ -0.68
TPM1-210ENST00000558264 FAM26DQ5JW98 314 aa10.79□□□□□ -0.68
TPM1-210ENST00000558264 N4BP2L1Q5TBK1 243 aaPredicted RBP10.79□□□□□ -0.68
TPM1-210ENST00000558264 C4orf50Q6ZRC1 276 aa10.79□□□□□ -0.68
TPM1-210ENST00000558264 MARK2Q7KZI7 788 aaKnown RBP10.79□□□□□ -0.68
TPM1-210ENST00000558264 CHSY1Q86X52 802 aa10.79□□□□□ -0.68
TPM1-210ENST00000558264 MIB1Q86YT6 1006 aa10.79□□□□□ -0.68
TPM1-210ENST00000558264 ARHGAP12Q8IWW6 846 aa10.79□□□□□ -0.68
TPM1-210ENST00000558264 COLGALT2Q8IYK4 626 aa10.79□□□□□ -0.68
TPM1-210ENST00000558264 ATPAF2Q8N5M1 289 aa10.79□□□□□ -0.68
TPM1-210ENST00000558264 IPMKQ8NFU5 416 aa10.79□□□□□ -0.68
TPM1-210ENST00000558264 ATP2A3Q93084 1043 aa10.79□□□□□ -0.68
TPM1-210ENST00000558264 UROC1Q96N76 676 aa10.79□□□□□ -0.68
TPM1-210ENST00000558264 SLC39A8Q9C0K1 460 aa10.79□□□□□ -0.68
TPM1-210ENST00000558264 KCNK13Q9HB14 408 aa10.79□□□□□ -0.68
TPM1-210ENST00000558264 ABCC13Q9NSE7 274 aa10.79□□□□□ -0.68
TPM1-210ENST00000558264 RRN3Q9NYV6 651 aa10.79□□□□□ -0.68
TPM1-210ENST00000558264 GMIPQ9P107 970 aa10.79□□□□□ -0.68
TPM1-210ENST00000558264 ARMCX1Q9P291 453 aa10.79□□□□□ -0.68
TPM1-210ENST00000558264 PCDHB8Q9UN66 801 aa10.79□□□□□ -0.68
TPM1-210ENST00000558264 DCTN3O75935 186 aa10.79□□□□□ -0.68
TPM1-210ENST00000558264 ALDH1A1P00352 501 aa10.79□□□□□ -0.68
TPM1-210ENST00000558264 IGLV3-25P01717 112 aa10.79□□□□□ -0.68
TPM1-210ENST00000558264 INHAP05111 366 aa10.79□□□□□ -0.68
TPM1-210ENST00000558264 T-ENOLP0DO92 83 aa10.79□□□□□ -0.68
TPM1-210ENST00000558264 NMBRP28336 390 aa10.79□□□□□ -0.68
TPM1-210ENST00000558264 CCR1P32246 355 aa10.79□□□□□ -0.68
TPM1-210ENST00000558264 TUBP50607 506 aa10.79□□□□□ -0.68
TPM1-210ENST00000558264 ARFIP2P53365 341 aa10.79□□□□□ -0.68
TPM1-210ENST00000558264 POU6F1Q14863 301 aa10.79□□□□□ -0.68
TPM1-210ENST00000558264 E2F5Q15329 346 aa10.79□□□□□ -0.68
TPM1-210ENST00000558264 MAPRE1Q15691 268 aaKnown RBP10.79□□□□□ -0.68
TPM1-210ENST00000558264 SNCBQ16143 134 aa10.79□□□□□ -0.68
TPM1-210ENST00000558264 VARS2Q5ST30 1063 aaKnown RBP10.79□□□□□ -0.68
TPM1-210ENST00000558264 FAM171A1Q5VUB5 890 aa10.79□□□□□ -0.68
TPM1-210ENST00000558264 STRA8Q7Z7C7 330 aa10.79□□□□□ -0.68
TPM1-210ENST00000558264 ALYREFQ86V81 257 aaKnown RBP10.79□□□□□ -0.68
TPM1-210ENST00000558264 ARID3BQ8IVW6 561 aaPredicted RBP10.79□□□□□ -0.68
TPM1-210ENST00000558264 E2F7Q96AV8 911 aa10.79□□□□□ -0.68
TPM1-210ENST00000558264 MTBPQ96DY7 904 aa10.79□□□□□ -0.68
TPM1-210ENST00000558264 CAPNS2Q96L46 248 aa10.79□□□□□ -0.68
TPM1-210ENST00000558264 TEKT5Q96M29 485 aa10.79□□□□□ -0.68
TPM1-210ENST00000558264 GPR62Q9BZJ7 368 aa10.79□□□□□ -0.68
TPM1-210ENST00000558264 GPBP1L1Q9HC44 474 aaPredicted RBP10.79□□□□□ -0.68
TPM1-210ENST00000558264 ACSS2Q9NR19 701 aa10.79□□□□□ -0.68
TPM1-210ENST00000558264 BFARQ9NZS9 450 aa10.79□□□□□ -0.68
TPM1-210ENST00000558264 EMCNQ9ULC0 261 aa10.79□□□□□ -0.68
TPM1-210ENST00000558264 HS3ST4Q9Y661 456 aa10.79□□□□□ -0.68
TPM1-210ENST00000558264 NLRC5Q86WI3 1866 aa10.78□□□□□ -0.68
TPM1-210ENST00000558264 TTC24A2A3L6 582 aaPredicted RBP10.78□□□□□ -0.68
TPM1-210ENST00000558264 ATP6V1G2O95670 118 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms