RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 PDE1AP54750 535 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 RHAGQ02094 409 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 KCNB1Q14721 858 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 TAF5Q15542 800 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 RPE65Q16518 533 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 GGT6Q6P531 493 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 DCDC5Q6ZRR9 648 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 UEVLDQ8IX04 471 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 NFKBIDQ8NI38 313 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 MPLKIPQ8TAP9 179 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 NEU4Q8WWR8 484 aaPredicted RBP1.89□□□□□ -2.11
HIF1A-212ENST00000557538 C5orf34Q96MH7 638 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 COG8Q96MW5 612 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 HERC2P3Q9BVR0 1158 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 EPS8L2Q9H6S3 715 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 NRBP1Q9UHY1 535 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 GDAQ9Y2T3 454 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 FANCIQ9NVI1 1328 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 ARID1BQ8NFD5 2236 aaPredicted RBP1.89□□□□□ -2.11
HIF1A-212ENST00000557538 FAM157AC9JC47 383 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 RRHO14718 337 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 MGST3O14880 152 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 BCAR3O75815 825 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 CHRM4P08173 479 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 PKMP14618 531 aaKnown RBP1.89□□□□□ -2.11
HIF1A-212ENST00000557538 DRD1P21728 446 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 BDNFP23560 247 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 NR1H2P55055 460 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 ANKRD45Q5TZF3 282 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 ASPHD1Q5U4P2 390 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 ATG16L1Q676U5 607 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 MZT2BQ6NZ67 158 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 C17orf99Q6UX52 265 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 RAB40AQ8WXH6 277 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 SORCS2Q96PQ0 1159 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 SEC62Q99442 399 aaKnown RBP1.89□□□□□ -2.11
HIF1A-212ENST00000557538 EIF3CQ99613 913 aaKnown RBP1.89□□□□□ -2.11
HIF1A-212ENST00000557538 WDR83Q9BRX9 315 aaKnown RBP1.89□□□□□ -2.11
HIF1A-212ENST00000557538 NUAK2Q9H093 628 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 CHODLQ9H9P2 273 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 Q9N2J8 555 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 TMEM248Q9NWD8 314 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 BAG5Q9UL15 447 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 RRP7AQ9Y3A4 280 aaKnown RBP1.89□□□□□ -2.11
HIF1A-212ENST00000557538 REXO2Q9Y3B8 237 aaKnown RBP1.89□□□□□ -2.11
HIF1A-212ENST00000557538 RAI2Q9Y5P3 530 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 C17orf113A0A1B0GUU1 675 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 HMX3A6NHT5 357 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 A6NLC8 198 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 TISP43B9A030 160 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 AP4M1O00189 453 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 CLIC1O00299 241 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 EPB41L2O43491 1005 aaKnown RBP1.89□□□□□ -2.11
HIF1A-212ENST00000557538 SCGB1D1O95968 90 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 IFIT1P09914 478 aaKnown RBP1.89□□□□□ -2.11
HIF1A-212ENST00000557538 ALADP13716 330 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 ENGP17813 658 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 RBM5P52756 815 aaKnown RBP eCLIP1.89□□□□□ -2.11
HIF1A-212ENST00000557538 B4GALNT1Q00973 533 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 KRT24Q2M2I5 525 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 KIAA1755Q5JYT7 1200 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 C1QTNF12Q5T7M4 302 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 ACAD10Q6JQN1 1059 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 DPY19L3Q6ZPD9 716 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 SLC44A3Q8N4M1 653 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 TNIP2Q8NFZ5 429 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 AFG1LQ8WV93 481 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 RUBCNQ92622 972 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 CENPIQ92674 756 aaPredicted RBP1.89□□□□□ -2.11
HIF1A-212ENST00000557538 ASB2Q96Q27 587 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 YY1AP1Q9H869 796 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 DDX52Q9Y2R4 599 aaKnown RBP eCLIP1.89□□□□□ -2.11
HIF1A-212ENST00000557538 GRM8O00222 908 aa1.88□□□□□ -2.11
HIF1A-212ENST00000557538 EBAG9O00559 213 aa1.88□□□□□ -2.11
HIF1A-212ENST00000557538 NPHP1O15259 732 aa1.88□□□□□ -2.11
HIF1A-212ENST00000557538 PRPF4O43172 522 aaKnown RBP eCLIP1.88□□□□□ -2.11
HIF1A-212ENST00000557538 SLPIP03973 132 aa1.88□□□□□ -2.11
HIF1A-212ENST00000557538 CYP2A6P11509 494 aaPredicted RBP1.88□□□□□ -2.11
HIF1A-212ENST00000557538 AKR1A1P14550 325 aa1.88□□□□□ -2.11
HIF1A-212ENST00000557538 XBP1P17861 261 aa1.88□□□□□ -2.11
HIF1A-212ENST00000557538 CAPN3P20807 821 aa1.88□□□□□ -2.11
HIF1A-212ENST00000557538 BSGP35613 385 aa1.88□□□□□ -2.11
HIF1A-212ENST00000557538 HNF1BP35680 557 aa1.88□□□□□ -2.11
HIF1A-212ENST00000557538 MAPK9P45984 424 aa1.88□□□□□ -2.11
HIF1A-212ENST00000557538 SLC37A1P57057 533 aa1.88□□□□□ -2.11
HIF1A-212ENST00000557538 CDK18Q07002 472 aa1.88□□□□□ -2.11
HIF1A-212ENST00000557538 MFSD13AQ14CX5 517 aa1.88□□□□□ -2.11
HIF1A-212ENST00000557538 DAZAP2Q15038 168 aaPredicted RBP1.88□□□□□ -2.11
HIF1A-212ENST00000557538 KRTAP15-1Q3LI76 137 aa1.88□□□□□ -2.11
HIF1A-212ENST00000557538 CERKLQ49MI3 558 aaPredicted RBP1.88□□□□□ -2.11
HIF1A-212ENST00000557538 RANBP10Q6VN20 620 aa1.88□□□□□ -2.11
HIF1A-212ENST00000557538 ESX1Q8N693 406 aa1.88□□□□□ -2.11
HIF1A-212ENST00000557538 MCPH1Q8NEM0 835 aa1.88□□□□□ -2.11
HIF1A-212ENST00000557538 RFWD2Q8NHY2 731 aa1.88□□□□□ -2.11
HIF1A-212ENST00000557538 MAP4K1Q92918 833 aa1.88□□□□□ -2.11
HIF1A-212ENST00000557538 ZNF764Q96H86 408 aaPredicted RBP1.88□□□□□ -2.11
HIF1A-212ENST00000557538 CCDC34Q96HJ3 373 aa1.88□□□□□ -2.11
HIF1A-212ENST00000557538 NR1H4Q96RI1 486 aaPredicted RBP1.88□□□□□ -2.11
HIF1A-212ENST00000557538 NPLQ9BXD5 320 aaPredicted RBP1.88□□□□□ -2.11
HIF1A-212ENST00000557538 GPR63Q9BZJ6 419 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms