RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 ERICH1Q86X53 443 aa10.57□□□□□ -0.72
RDH11-210ENST00000557331 DCP2Q8IU60 420 aaKnown RBP10.57□□□□□ -0.72
RDH11-210ENST00000557331 DHX40Q8IX18 779 aaKnown RBP10.57□□□□□ -0.72
RDH11-210ENST00000557331 ZC3H3Q8IXZ2 948 aaKnown RBP10.57□□□□□ -0.72
RDH11-210ENST00000557331 SNRNP27Q8WVK2 155 aaKnown RBP10.57□□□□□ -0.72
RDH11-210ENST00000557331 FAM131CQ96AQ9 280 aa10.57□□□□□ -0.72
RDH11-210ENST00000557331 KLHDC7BQ96G42 594 aa10.57□□□□□ -0.72
RDH11-210ENST00000557331 MRGPRX3Q96LB0 322 aa10.57□□□□□ -0.72
RDH11-210ENST00000557331 FAM129BQ96TA1 746 aa10.57□□□□□ -0.72
RDH11-210ENST00000557331 DUSP23Q9BVJ7 150 aa10.57□□□□□ -0.72
RDH11-210ENST00000557331 GTPBP4Q9BZE4 634 aaKnown RBP10.57□□□□□ -0.72
RDH11-210ENST00000557331 THSD1Q9NS62 852 aa10.57□□□□□ -0.72
RDH11-210ENST00000557331 KLHL11Q9NVR0 708 aa10.57□□□□□ -0.72
RDH11-210ENST00000557331 SERTAD1Q9UHV2 236 aa10.57□□□□□ -0.72
RDH11-210ENST00000557331 RCOR1Q9UKL0 485 aa10.57□□□□□ -0.72
RDH11-210ENST00000557331 COQ4Q9Y3A0 265 aa10.57□□□□□ -0.72
RDH11-210ENST00000557331 MYLKQ15746 1914 aa10.56□□□□□ -0.72
RDH11-210ENST00000557331 C1QTNF3-AMACRE9PGA6 284 aa10.56□□□□□ -0.72
RDH11-210ENST00000557331 O00370 1275 aa10.56□□□□□ -0.72
RDH11-210ENST00000557331 LUC7L3O95232 432 aaKnown RBP10.56□□□□□ -0.72
RDH11-210ENST00000557331 IL1BP01584 269 aa10.56□□□□□ -0.72
RDH11-210ENST00000557331 APOEP02649 317 aa10.56□□□□□ -0.72
RDH11-210ENST00000557331 LTFP02788 710 aa10.56□□□□□ -0.72
RDH11-210ENST00000557331 ZSCAN22P10073 491 aaPredicted RBP10.56□□□□□ -0.72
RDH11-210ENST00000557331 SLC2A3P11169 496 aa10.56□□□□□ -0.72
RDH11-210ENST00000557331 MLLT3P42568 568 aaPredicted RBP10.56□□□□□ -0.72
RDH11-210ENST00000557331 DAB2P98082 770 aa10.56□□□□□ -0.72
RDH11-210ENST00000557331 INSM1Q01101 510 aaPredicted RBP10.56□□□□□ -0.72
RDH11-210ENST00000557331 CCDC173Q0VFZ6 552 aa10.56□□□□□ -0.72
RDH11-210ENST00000557331 CETN1Q12798 172 aa10.56□□□□□ -0.72
RDH11-210ENST00000557331 CNGA2Q16280 664 aa10.56□□□□□ -0.72
RDH11-210ENST00000557331 MS4A13Q5J8X5 152 aa10.56□□□□□ -0.72
RDH11-210ENST00000557331 PITRM1Q5JRX3 1037 aa10.56□□□□□ -0.72
RDH11-210ENST00000557331 PRAMEF14Q5SWL7 426 aa10.56□□□□□ -0.72
RDH11-210ENST00000557331 RFWD3Q6PCD5 774 aa10.56□□□□□ -0.72
RDH11-210ENST00000557331 KANSL1Q7Z3B3 1105 aa10.56□□□□□ -0.72
RDH11-210ENST00000557331 CARNMT1Q8N4J0 409 aa10.56□□□□□ -0.72
RDH11-210ENST00000557331 OR4C6Q8NH72 309 aa10.56□□□□□ -0.72
RDH11-210ENST00000557331 TPCN2Q8NHX9 752 aa10.56□□□□□ -0.72
RDH11-210ENST00000557331 SLC35F5Q8WV83 523 aa10.56□□□□□ -0.72
RDH11-210ENST00000557331 OR8D1Q8WZ84 308 aa10.56□□□□□ -0.72
RDH11-210ENST00000557331 TATDN2Q93075 761 aa10.56□□□□□ -0.72
RDH11-210ENST00000557331 HIC2Q96JB3 615 aa10.56□□□□□ -0.72
RDH11-210ENST00000557331 MMRN2Q9H8L6 949 aa10.56□□□□□ -0.72
RDH11-210ENST00000557331 EBF2Q9HAK2 575 aa10.56□□□□□ -0.72
RDH11-210ENST00000557331 PREBQ9HCU5 417 aa10.56□□□□□ -0.72
RDH11-210ENST00000557331 TMEM51Q9NW97 253 aa10.56□□□□□ -0.72
RDH11-210ENST00000557331 STIM2Q9P246 746 aa10.56□□□□□ -0.72
RDH11-210ENST00000557331 TJP2Q9UDY2 1190 aa10.56□□□□□ -0.72
RDH11-210ENST00000557331 SERGEFQ9UGK8 458 aa10.56□□□□□ -0.72
RDH11-210ENST00000557331 CYTH4Q9UIA0 394 aa10.56□□□□□ -0.72
RDH11-210ENST00000557331 FARP1Q9Y4F1 1045 aaPredicted RBP10.56□□□□□ -0.72
RDH11-210ENST00000557331 HECTD1Q9ULT8 2610 aa10.56□□□□□ -0.72
RDH11-210ENST00000557331 SLC16A3O15427 465 aaKnown RBP10.55□□□□□ -0.72
RDH11-210ENST00000557331 MSI1O43347 362 aaKnown RBP10.55□□□□□ -0.72
RDH11-210ENST00000557331 PLRG1O43660 514 aaKnown RBP10.55□□□□□ -0.72
RDH11-210ENST00000557331 CKMT1AP12532 417 aa10.55□□□□□ -0.72
RDH11-210ENST00000557331 C6P13671 934 aa10.55□□□□□ -0.72
RDH11-210ENST00000557331 MZF1P28698 734 aaPredicted RBP10.55□□□□□ -0.72
RDH11-210ENST00000557331 SLC6A4P31645 630 aa10.55□□□□□ -0.72
RDH11-210ENST00000557331 ACADSBP45954 432 aa10.55□□□□□ -0.72
RDH11-210ENST00000557331 PSMD8P48556 350 aa10.55□□□□□ -0.72
RDH11-210ENST00000557331 PLK1P53350 603 aa10.55□□□□□ -0.72
RDH11-210ENST00000557331 KCNC4Q03721 635 aa10.55□□□□□ -0.72
RDH11-210ENST00000557331 BNIP3Q12983 259 aa10.55□□□□□ -0.72
RDH11-210ENST00000557331 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.55□□□□□ -0.72
RDH11-210ENST00000557331 ZSCAN30Q86W11 494 aa10.55□□□□□ -0.72
RDH11-210ENST00000557331 GRAMD1CQ8IYS0 662 aa10.55□□□□□ -0.72
RDH11-210ENST00000557331 AADATQ8N5Z0 425 aa10.55□□□□□ -0.72
RDH11-210ENST00000557331 FAM181AQ8N9Y4 354 aa10.55□□□□□ -0.72
RDH11-210ENST00000557331 WFDC5Q8TCV5 224 aa10.55□□□□□ -0.72
RDH11-210ENST00000557331 SEMA4DQ92854 862 aa10.55□□□□□ -0.72
RDH11-210ENST00000557331 PTPRN2Q92932 1015 aa10.55□□□□□ -0.72
RDH11-210ENST00000557331 BTN2A3PQ96KV6 586 aa10.55□□□□□ -0.72
RDH11-210ENST00000557331 CCDC114Q96M63 670 aa10.55□□□□□ -0.72
RDH11-210ENST00000557331 ABCG4Q9H172 646 aa10.55□□□□□ -0.72
RDH11-210ENST00000557331 CLMPQ9H6B4 373 aa10.55□□□□□ -0.72
RDH11-210ENST00000557331 POLR1BQ9H9Y6 1135 aa10.55□□□□□ -0.72
RDH11-210ENST00000557331 ARHGAP20Q9P2F6 1191 aa10.55□□□□□ -0.72
RDH11-210ENST00000557331 INTS6Q9UL03 887 aaKnown RBP10.55□□□□□ -0.72
RDH11-210ENST00000557331 MUC22E2RYF6 1773 aaPredicted RBP10.54□□□□□ -0.72
RDH11-210ENST00000557331 TTC34A8MYJ7 566 aa10.54□□□□□ -0.72
RDH11-210ENST00000557331 B8ZZF3 427 aa10.54□□□□□ -0.72
RDH11-210ENST00000557331 CBX4O00257 560 aa10.54□□□□□ -0.72
RDH11-210ENST00000557331 TULP2O00295 520 aa10.54□□□□□ -0.72
RDH11-210ENST00000557331 PMM2O15305 246 aa10.54□□□□□ -0.72
RDH11-210ENST00000557331 SIGLEC6O43699 453 aa10.54□□□□□ -0.72
RDH11-210ENST00000557331 LZTS3O60299 673 aaPredicted RBP10.54□□□□□ -0.72
RDH11-210ENST00000557331 ZIC2O95409 532 aaPredicted RBP10.54□□□□□ -0.72
RDH11-210ENST00000557331 F13A1P00488 732 aa10.54□□□□□ -0.72
RDH11-210ENST00000557331 LCP1P13796 627 aa10.54□□□□□ -0.72
RDH11-210ENST00000557331 RBMS1P29558 406 aaKnown RBP10.54□□□□□ -0.72
RDH11-210ENST00000557331 SYKP43405 635 aa10.54□□□□□ -0.72
RDH11-210ENST00000557331 RPS24P62847 133 aaKnown RBP10.54□□□□□ -0.72
RDH11-210ENST00000557331 VAC14Q08AM6 782 aa10.54□□□□□ -0.72
RDH11-210ENST00000557331 MEA1Q16626 185 aa10.54□□□□□ -0.72
RDH11-210ENST00000557331 DCAF6Q58WW2 860 aa10.54□□□□□ -0.72
RDH11-210ENST00000557331 RABGAP1LQ5R372 815 aa10.54□□□□□ -0.72
RDH11-210ENST00000557331 CDCP2Q5VXM1 449 aa10.54□□□□□ -0.72
RDH11-210ENST00000557331 SPATS2Q86XZ4 545 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms