RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 CAAP1Q9H8G2 361 aa15.27■□□□□ 0.04
CHD8-211ENST00000556833 FAM204AQ9H8W3 233 aa15.27■□□□□ 0.04
CHD8-211ENST00000556833 CA5BQ9Y2D0 317 aa15.27■□□□□ 0.04
CHD8-211ENST00000556833 COL5A1P20908 1838 aaPredicted RBP15.27■□□□□ 0.03
CHD8-211ENST00000556833 TBC1D3DA0A087WVF3 549 aa15.26■□□□□ 0.03
CHD8-211ENST00000556833 TBC1D3IA0A087WXS9 549 aa15.26■□□□□ 0.03
CHD8-211ENST00000556833 TBC1D3EA0A087X179 549 aa15.26■□□□□ 0.03
CHD8-211ENST00000556833 TBC1D3KA0A087X1G2 549 aa15.26■□□□□ 0.03
CHD8-211ENST00000556833 TBC1D3FA6NER0 549 aaPredicted RBP15.26■□□□□ 0.03
CHD8-211ENST00000556833 TBC1D3LB9A6J9 549 aa15.26■□□□□ 0.03
CHD8-211ENST00000556833 PAPSS1O43252 624 aaPredicted RBP15.26■□□□□ 0.03
CHD8-211ENST00000556833 THAP12O43422 761 aa15.26■□□□□ 0.03
CHD8-211ENST00000556833 SDC3O75056 442 aa15.26■□□□□ 0.03
CHD8-211ENST00000556833 RTN2O75298 545 aa15.26■□□□□ 0.03
CHD8-211ENST00000556833 GRAP2O75791 330 aa15.26■□□□□ 0.03
CHD8-211ENST00000556833 LDOC1O95751 146 aaPredicted RBP15.26■□□□□ 0.03
CHD8-211ENST00000556833 TRUB2O95900 331 aaKnown RBP15.26■□□□□ 0.03
CHD8-211ENST00000556833 TBC1D3HP0C7X1 549 aa15.26■□□□□ 0.03
CHD8-211ENST00000556833 USP8P40818 1118 aa15.26■□□□□ 0.03
CHD8-211ENST00000556833 GPD2P43304 727 aa15.26■□□□□ 0.03
CHD8-211ENST00000556833 IRAK1P51617 712 aa15.26■□□□□ 0.03
CHD8-211ENST00000556833 SEMG2Q02383 582 aa15.26■□□□□ 0.03
CHD8-211ENST00000556833 APBA1Q02410 837 aa15.26■□□□□ 0.03
CHD8-211ENST00000556833 STILQ15468 1287 aa15.26■□□□□ 0.03
CHD8-211ENST00000556833 ACCSLQ4AC99 568 aa15.26■□□□□ 0.03
CHD8-211ENST00000556833 TBC1D3GQ6DHY5 549 aa15.26■□□□□ 0.03
CHD8-211ENST00000556833 TBC1D3CQ6IPX1 549 aa15.26■□□□□ 0.03
CHD8-211ENST00000556833 SND1Q7KZF4 910 aaKnown RBP eCLIP15.26■□□□□ 0.03
CHD8-211ENST00000556833 CREBRFQ8IUR6 639 aa15.26■□□□□ 0.03
CHD8-211ENST00000556833 PASD1Q8IV76 773 aa15.26■□□□□ 0.03
CHD8-211ENST00000556833 TBC1D3Q8IZP1 549 aaPredicted RBP15.26■□□□□ 0.03
CHD8-211ENST00000556833 ZNF557Q8N988 423 aaPredicted RBP15.26■□□□□ 0.03
CHD8-211ENST00000556833 PTPRN2Q92932 1015 aa15.26■□□□□ 0.03
CHD8-211ENST00000556833 AZIN2Q96A70 460 aa15.26■□□□□ 0.03
CHD8-211ENST00000556833 CEP63Q96MT8 703 aa15.26■□□□□ 0.03
CHD8-211ENST00000556833 GDF3Q9NR23 364 aa15.26■□□□□ 0.03
CHD8-211ENST00000556833 SCML1Q9UN30 329 aa15.26■□□□□ 0.03
CHD8-211ENST00000556833 ARID1BQ8NFD5 2236 aaPredicted RBP15.25■□□□□ 0.03
CHD8-211ENST00000556833 A0A1W2PR77 199 aa15.25■□□□□ 0.03
CHD8-211ENST00000556833 F5H5T6 163 aa15.25■□□□□ 0.03
CHD8-211ENST00000556833 SRPRAP08240 638 aaKnown RBP15.25■□□□□ 0.03
CHD8-211ENST00000556833 JUPP14923 745 aa15.25■□□□□ 0.03
CHD8-211ENST00000556833 GOT1P17174 413 aa15.25■□□□□ 0.03
CHD8-211ENST00000556833 ITPKBP27987 946 aa15.25■□□□□ 0.03
CHD8-211ENST00000556833 CETN1Q12798 172 aa15.25■□□□□ 0.03
CHD8-211ENST00000556833 KCNH2Q12809 1159 aa15.25■□□□□ 0.03
CHD8-211ENST00000556833 TTI2Q6NXR4 508 aa15.25■□□□□ 0.03
CHD8-211ENST00000556833 CCAR2Q8N163 923 aaKnown RBP15.25■□□□□ 0.03
CHD8-211ENST00000556833 PDCD7Q8N8D1 485 aaKnown RBP15.25■□□□□ 0.03
CHD8-211ENST00000556833 EHBP1Q8NDI1 1231 aa15.25■□□□□ 0.03
CHD8-211ENST00000556833 SPATA20Q8TB22 786 aa15.25■□□□□ 0.03
CHD8-211ENST00000556833 KLK6Q92876 244 aa15.25■□□□□ 0.03
CHD8-211ENST00000556833 RNF34Q969K3 372 aa15.25■□□□□ 0.03
CHD8-211ENST00000556833 DHTKD1Q96HY7 919 aaPredicted RBP15.25■□□□□ 0.03
CHD8-211ENST00000556833 CRACR2AQ9BSW2 395 aa15.25■□□□□ 0.03
CHD8-211ENST00000556833 UBE2TQ9NPD8 197 aaPredicted RBP15.25■□□□□ 0.03
CHD8-211ENST00000556833 FZD4Q9ULV1 537 aa15.25■□□□□ 0.03
CHD8-211ENST00000556833 ITIH6Q6UXX5 1313 aa15.24■□□□□ 0.03
CHD8-211ENST00000556833 TARSL2A2RTX5 802 aaKnown RBP15.24■□□□□ 0.03
CHD8-211ENST00000556833 EIF4E1BA6NMX2 242 aaKnown RBP15.24■□□□□ 0.03
CHD8-211ENST00000556833 RFPL3O75679 317 aa15.24■□□□□ 0.03
CHD8-211ENST00000556833 ZIC2O95409 532 aaPredicted RBP15.24■□□□□ 0.03
CHD8-211ENST00000556833 ADH1BP00325 375 aa15.24■□□□□ 0.03
CHD8-211ENST00000556833 PRB1P04280 392 aa15.24■□□□□ 0.03
CHD8-211ENST00000556833 C7P10643 843 aa15.24■□□□□ 0.03
CHD8-211ENST00000556833 BMP6P22004 513 aa15.24■□□□□ 0.03
CHD8-211ENST00000556833 EPHA8P29322 1005 aaPredicted RBP15.24■□□□□ 0.03
CHD8-211ENST00000556833 GNA15P30679 374 aa15.24■□□□□ 0.03
CHD8-211ENST00000556833 DRD3P35462 400 aa15.24■□□□□ 0.03
CHD8-211ENST00000556833 ARHGAP44Q17R89 818 aa15.24■□□□□ 0.03
CHD8-211ENST00000556833 HES3Q5TGS1 186 aa15.24■□□□□ 0.03
CHD8-211ENST00000556833 SPATS2Q86XZ4 545 aaKnown RBP15.24■□□□□ 0.03
CHD8-211ENST00000556833 OR52K2Q8NGK3 314 aa15.24■□□□□ 0.03
CHD8-211ENST00000556833 SAP25Q8TEE9 199 aa15.24■□□□□ 0.03
CHD8-211ENST00000556833 SKA1Q96BD8 255 aa15.24■□□□□ 0.03
CHD8-211ENST00000556833 BTN2A3PQ96KV6 586 aa15.24■□□□□ 0.03
CHD8-211ENST00000556833 POPDC2Q9HBU9 364 aa15.24■□□□□ 0.03
CHD8-211ENST00000556833 ADAMTS1Q9UHI8 967 aa15.24■□□□□ 0.03
CHD8-211ENST00000556833 SARDHQ9UL12 918 aa15.24■□□□□ 0.03
CHD8-211ENST00000556833 AK5Q9Y6K8 562 aa15.24■□□□□ 0.03
CHD8-211ENST00000556833 PPP1R3GB7ZBB8 358 aa15.23■□□□□ 0.03
CHD8-211ENST00000556833 TLR4O00206 839 aa15.23■□□□□ 0.03
CHD8-211ENST00000556833 SART1O43290 800 aaKnown RBP15.23■□□□□ 0.03
CHD8-211ENST00000556833 AFPP02771 609 aaKnown RBP15.23■□□□□ 0.03
CHD8-211ENST00000556833 C5AR1P21730 350 aa15.23■□□□□ 0.03
CHD8-211ENST00000556833 ACADSBP45954 432 aa15.23■□□□□ 0.03
CHD8-211ENST00000556833 ACADVLP49748 655 aa15.23■□□□□ 0.03
CHD8-211ENST00000556833 CCR5P51681 352 aa15.23■□□□□ 0.03
CHD8-211ENST00000556833 NXPH1P58417 271 aa15.23■□□□□ 0.03
CHD8-211ENST00000556833 GCNT1Q02742 428 aa15.23■□□□□ 0.03
CHD8-211ENST00000556833 SFSWAPQ12872 951 aaKnown RBP15.23■□□□□ 0.03
CHD8-211ENST00000556833 TARDBPQ13148 414 aaKnown RBP eCLIP15.23■□□□□ 0.03
CHD8-211ENST00000556833 NME3Q13232 169 aa15.23■□□□□ 0.03
CHD8-211ENST00000556833 NNTQ13423 1086 aa15.23■□□□□ 0.03
CHD8-211ENST00000556833 Q6ZVU0 165 aa15.23■□□□□ 0.03
CHD8-211ENST00000556833 DEFB106AQ8N104 65 aa15.23■□□□□ 0.03
CHD8-211ENST00000556833 ATP6V0D2Q8N8Y2 350 aa15.23■□□□□ 0.03
CHD8-211ENST00000556833 RPRD1AQ96P16 312 aaPredicted RBP15.23■□□□□ 0.03
CHD8-211ENST00000556833 SLC4A5Q9BY07 1137 aa15.23■□□□□ 0.03
CHD8-211ENST00000556833 IRX2Q9BZI1 471 aaPredicted RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms