RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 CDK16Q00536 496 aa18.75■□□□□ 0.59
SDR39U1-220ENST00000556548 SWT1Q5T5J6 900 aaKnown RBP18.75■□□□□ 0.59
SDR39U1-220ENST00000556548 MZB1Q8WU39 189 aa18.75■□□□□ 0.59
SDR39U1-220ENST00000556548 ZNF333Q96JL9 665 aa18.75■□□□□ 0.59
SDR39U1-220ENST00000556548 SYBUQ9NX95 663 aa18.75■□□□□ 0.59
SDR39U1-220ENST00000556548 IL1RAPL1Q9NZN1 696 aa18.75■□□□□ 0.59
SDR39U1-220ENST00000556548 SLC17A6Q9P2U8 582 aa18.75■□□□□ 0.59
SDR39U1-220ENST00000556548 PCDHA11Q9Y5I1 949 aa18.75■□□□□ 0.59
SDR39U1-220ENST00000556548 SHROOM3Q8TF72 1996 aa18.75■□□□□ 0.59
SDR39U1-220ENST00000556548 ARHGAP42A6NI28 874 aa18.74■□□□□ 0.59
SDR39U1-220ENST00000556548 CSF2RAP15509 400 aa18.74■□□□□ 0.59
SDR39U1-220ENST00000556548 WDR4P57081 412 aaKnown RBP18.74■□□□□ 0.59
SDR39U1-220ENST00000556548 RASA2Q15283 850 aa18.74■□□□□ 0.59
SDR39U1-220ENST00000556548 MS4A13Q5J8X5 152 aa18.74■□□□□ 0.59
SDR39U1-220ENST00000556548 GSDMBQ8TAX9 411 aa18.74■□□□□ 0.59
SDR39U1-220ENST00000556548 SPATA17Q96L03 361 aa18.74■□□□□ 0.59
SDR39U1-220ENST00000556548 MLPHQ9BV36 600 aaPredicted RBP18.74■□□□□ 0.59
SDR39U1-220ENST00000556548 BRD8Q9H0E9 1235 aa18.74■□□□□ 0.59
SDR39U1-220ENST00000556548 EIF2B3Q9NR50 452 aaKnown RBP18.74■□□□□ 0.59
SDR39U1-220ENST00000556548 FGF10O15520 208 aaPredicted RBP18.74■□□□□ 0.59
SDR39U1-220ENST00000556548 CNTN5O94779 1100 aa18.74■□□□□ 0.59
SDR39U1-220ENST00000556548 CSH1P0DML2 217 aa18.74■□□□□ 0.59
SDR39U1-220ENST00000556548 CSH2P0DML3 217 aa18.74■□□□□ 0.59
SDR39U1-220ENST00000556548 ACRP10323 421 aa18.74■□□□□ 0.59
SDR39U1-220ENST00000556548 RPL10AP62906 217 aaKnown RBP18.74■□□□□ 0.59
SDR39U1-220ENST00000556548 RAP1GAP2Q684P5 730 aa18.74■□□□□ 0.59
SDR39U1-220ENST00000556548 MICAL3Q7RTP6 2002 aa18.74■□□□□ 0.59
SDR39U1-220ENST00000556548 LRRC6Q86X45 466 aa18.74■□□□□ 0.59
SDR39U1-220ENST00000556548 CNTD1Q8N815 330 aa18.74■□□□□ 0.59
SDR39U1-220ENST00000556548 DNAAF3Q8N9W5 541 aa18.74■□□□□ 0.59
SDR39U1-220ENST00000556548 ZSCAN18Q8TBC5 510 aaPredicted RBP18.74■□□□□ 0.59
SDR39U1-220ENST00000556548 ZNF419Q96HQ0 510 aaPredicted RBP18.74■□□□□ 0.59
SDR39U1-220ENST00000556548 GBA3Q9H227 469 aa18.74■□□□□ 0.59
SDR39U1-220ENST00000556548 MTRRQ9UBK8 725 aa18.74■□□□□ 0.59
SDR39U1-220ENST00000556548 SEC24AO95486 1093 aa18.73■□□□□ 0.59
SDR39U1-220ENST00000556548 CCNB1P14635 433 aa18.73■□□□□ 0.59
SDR39U1-220ENST00000556548 HOXC13P31276 330 aa18.73■□□□□ 0.59
SDR39U1-220ENST00000556548 CBLBQ13191 982 aa18.73■□□□□ 0.59
SDR39U1-220ENST00000556548 SLC1A5Q15758 541 aa18.73■□□□□ 0.59
SDR39U1-220ENST00000556548 SLC26A11Q86WA9 606 aa18.73■□□□□ 0.59
SDR39U1-220ENST00000556548 CIR1Q86X95 450 aaPredicted RBP18.73■□□□□ 0.59
SDR39U1-220ENST00000556548 SPATA22Q8NHS9 363 aa18.73■□□□□ 0.59
SDR39U1-220ENST00000556548 AUTS2Q8WXX7 1259 aa18.73■□□□□ 0.59
SDR39U1-220ENST00000556548 ARNTL2Q8WYA1 636 aa18.73■□□□□ 0.59
SDR39U1-220ENST00000556548 TOP1MTQ969P6 601 aa18.73■□□□□ 0.59
SDR39U1-220ENST00000556548 SERAC1Q96JX3 654 aa18.73■□□□□ 0.59
SDR39U1-220ENST00000556548 TEKT5Q96M29 485 aa18.73■□□□□ 0.59
SDR39U1-220ENST00000556548 CLSTN3Q9BQT9 956 aa18.73■□□□□ 0.59
SDR39U1-220ENST00000556548 CLIC5Q9NZA1 410 aa18.73■□□□□ 0.59
SDR39U1-220ENST00000556548 LAMA3Q16787 3333 aa18.73■□□□□ 0.59
SDR39U1-220ENST00000556548 GOLGA6L7A0A1B0GV03 622 aa18.73■□□□□ 0.59
SDR39U1-220ENST00000556548 MTSS1O43312 755 aa18.73■□□□□ 0.59
SDR39U1-220ENST00000556548 TLR5O60602 858 aa18.73■□□□□ 0.59
SDR39U1-220ENST00000556548 MAFKO60675 156 aa18.73■□□□□ 0.59
SDR39U1-220ENST00000556548 MT-ND3P03897 115 aa18.73■□□□□ 0.59
SDR39U1-220ENST00000556548 SLC2A3P11169 496 aa18.73■□□□□ 0.59
SDR39U1-220ENST00000556548 MLNP12872 115 aa18.73■□□□□ 0.59
SDR39U1-220ENST00000556548 PRKCHP24723 683 aa18.73■□□□□ 0.59
SDR39U1-220ENST00000556548 GBP2P32456 591 aaPredicted RBP18.73■□□□□ 0.59
SDR39U1-220ENST00000556548 PAPOLAP51003 745 aaKnown RBP18.73■□□□□ 0.59
SDR39U1-220ENST00000556548 COG7P83436 770 aa18.73■□□□□ 0.59
SDR39U1-220ENST00000556548 BMPR2Q13873 1038 aa18.73■□□□□ 0.59
SDR39U1-220ENST00000556548 ZKSCAN8Q15776 578 aaPredicted RBP18.73■□□□□ 0.59
SDR39U1-220ENST00000556548 ALFQ53S48 1182 aa18.73■□□□□ 0.59
SDR39U1-220ENST00000556548 SLC8B1Q6J4K2 584 aa18.73■□□□□ 0.59
SDR39U1-220ENST00000556548 RTL3Q8N8U3 475 aaKnown RBP18.73■□□□□ 0.59
SDR39U1-220ENST00000556548 CKAP2Q8WWK9 683 aa18.73■□□□□ 0.59
SDR39U1-220ENST00000556548 SEC16BQ96JE7 1060 aa18.73■□□□□ 0.59
SDR39U1-220ENST00000556548 CCDC134Q9H6E4 229 aa18.73■□□□□ 0.59
SDR39U1-220ENST00000556548 SENP1Q9P0U3 644 aa18.73■□□□□ 0.59
SDR39U1-220ENST00000556548 TRHDEQ9UKU6 1024 aa18.73■□□□□ 0.59
SDR39U1-220ENST00000556548 IQANK1A0A1B0GTG1 560 aa18.72■□□□□ 0.59
SDR39U1-220ENST00000556548 TRDMT1O14717 391 aaKnown RBP18.72■□□□□ 0.59
SDR39U1-220ENST00000556548 PRPF4O43172 522 aaKnown RBP eCLIP18.72■□□□□ 0.594e-10■■■■□ 19.7
SDR39U1-220ENST00000556548 TYROBPO43914 113 aa18.72■□□□□ 0.59
SDR39U1-220ENST00000556548 AP2A1O95782 977 aa18.72■□□□□ 0.59
SDR39U1-220ENST00000556548 TPH1P17752 444 aa18.72■□□□□ 0.59
SDR39U1-220ENST00000556548 DNAJB2P25686 324 aa18.72■□□□□ 0.59
SDR39U1-220ENST00000556548 SMARCB1Q12824 385 aa18.72■□□□□ 0.59
SDR39U1-220ENST00000556548 TRIP4Q15650 581 aaPredicted RBP18.72■□□□□ 0.59
SDR39U1-220ENST00000556548 DPF3Q92784 378 aa18.72■□□□□ 0.59
SDR39U1-220ENST00000556548 IGSF8Q969P0 613 aa18.72■□□□□ 0.59
SDR39U1-220ENST00000556548 TGS1Q96RS0 853 aaKnown RBP18.72■□□□□ 0.59
SDR39U1-220ENST00000556548 GRID1Q9ULK0 1009 aa18.72■□□□□ 0.59
SDR39U1-220ENST00000556548 PLXNA3P51805 1871 aa18.72■□□□□ 0.59
SDR39U1-220ENST00000556548 TRIM43BA6NCK2 446 aa18.72■□□□□ 0.59
SDR39U1-220ENST00000556548 EFEMP2O95967 443 aa18.72■□□□□ 0.59
SDR39U1-220ENST00000556548 KCNQ1P51787 676 aa18.72■□□□□ 0.59
SDR39U1-220ENST00000556548 CORO7P57737 925 aa18.72■□□□□ 0.59
SDR39U1-220ENST00000556548 NUGGCQ68CJ6 796 aa18.72■□□□□ 0.59
SDR39U1-220ENST00000556548 ITPRIPL1Q6GPH6 555 aa18.72■□□□□ 0.59
SDR39U1-220ENST00000556548 ATP6V0D2Q8N8Y2 350 aa18.72■□□□□ 0.59
SDR39U1-220ENST00000556548 DENND1AQ8TEH3 1009 aa18.72■□□□□ 0.59
SDR39U1-220ENST00000556548 TRIM43Q96BQ3 446 aaPredicted RBP18.72■□□□□ 0.59
SDR39U1-220ENST00000556548 OXNAD1Q96HP4 312 aaPredicted RBP18.72■□□□□ 0.59
SDR39U1-220ENST00000556548 C1orf74Q96LT6 269 aa18.72■□□□□ 0.59
SDR39U1-220ENST00000556548 ZNF512Q96ME7 567 aaPredicted RBP18.72■□□□□ 0.59
SDR39U1-220ENST00000556548 ELAC2Q9BQ52 826 aaKnown RBP18.72■□□□□ 0.59
SDR39U1-220ENST00000556548 FGFR1OP2Q9NVK5 253 aa18.72■□□□□ 0.59
SDR39U1-220ENST00000556548 TRIM49D1C9J1S8 452 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms