RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 OLFML1Q6UWY5 402 aa23.3■■□□□ 1.32
ACTN1-220ENST00000556433 LAYNQ6UX15 382 aa23.3■■□□□ 1.32
ACTN1-220ENST00000556433 DBX2Q6ZNG2 339 aa23.3■■□□□ 1.32
ACTN1-220ENST00000556433 ADAT2Q7Z6V5 191 aaKnown RBP23.3■■□□□ 1.32
ACTN1-220ENST00000556433 RHBDD1Q8TEB9 315 aa23.3■■□□□ 1.32
ACTN1-220ENST00000556433 ADAMTS14Q8WXS8 1223 aa23.3■■□□□ 1.32
ACTN1-220ENST00000556433 IGSF8Q969P0 613 aa23.3■■□□□ 1.32
ACTN1-220ENST00000556433 RPRD1AQ96P16 312 aaPredicted RBP23.3■■□□□ 1.32
ACTN1-220ENST00000556433 NDST4Q9H3R1 872 aa23.3■■□□□ 1.32
ACTN1-220ENST00000556433 PLCB1Q9NQ66 1216 aa23.3■■□□□ 1.32
ACTN1-220ENST00000556433 FRYQ5TBA9 3013 aa23.3■■□□□ 1.32
ACTN1-220ENST00000556433 CABIN1Q9Y6J0 2220 aa23.29■■□□□ 1.32
ACTN1-220ENST00000556433 LRRC72A6NJI9 287 aa23.29■■□□□ 1.32
ACTN1-220ENST00000556433 BPIFB4P59827 614 aa23.29■■□□□ 1.32
ACTN1-220ENST00000556433 PTPN20Q4JDL3 420 aa23.29■■□□□ 1.32
ACTN1-220ENST00000556433 HSP90AA4PQ58FG1 418 aa23.29■■□□□ 1.32
ACTN1-220ENST00000556433 GLRX5Q86SX6 157 aa23.29■■□□□ 1.32
ACTN1-220ENST00000556433 SLCO6A1Q86UG4 719 aa23.29■■□□□ 1.32
ACTN1-220ENST00000556433 FAM71AQ8IYT1 594 aa23.29■■□□□ 1.32
ACTN1-220ENST00000556433 ZCCHC14Q8WYQ9 949 aaKnown RBP23.29■■□□□ 1.32
ACTN1-220ENST00000556433 PPP1R9BQ96SB3 815 aa23.29■■□□□ 1.32
ACTN1-220ENST00000556433 TUBGCP2Q9BSJ2 902 aa23.29■■□□□ 1.32
ACTN1-220ENST00000556433 PDCL3Q9H2J4 239 aa23.29■■□□□ 1.32
ACTN1-220ENST00000556433 ADAMTS1Q9UHI8 967 aa23.29■■□□□ 1.32
ACTN1-220ENST00000556433 VANGL2Q9ULK5 521 aa23.29■■□□□ 1.32
ACTN1-220ENST00000556433 FZD4Q9ULV1 537 aa23.29■■□□□ 1.32
ACTN1-220ENST00000556433 IGF2RP11717 2491 aa23.28■■□□□ 1.32
ACTN1-220ENST00000556433 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.28■■□□□ 1.32
ACTN1-220ENST00000556433 A0A1W2PPC4 97 aa23.28■■□□□ 1.32
ACTN1-220ENST00000556433 M0QYT0 321 aa23.28■■□□□ 1.32
ACTN1-220ENST00000556433 FLRT2O43155 660 aa23.28■■□□□ 1.32
ACTN1-220ENST00000556433 DAB1O75553 588 aa23.28■■□□□ 1.32
ACTN1-220ENST00000556433 ADH1BP00325 375 aa23.28■■□□□ 1.32
ACTN1-220ENST00000556433 IL1BP01584 269 aa23.28■■□□□ 1.32
ACTN1-220ENST00000556433 GOT1P17174 413 aa23.28■■□□□ 1.32
ACTN1-220ENST00000556433 C5AR1P21730 350 aa23.28■■□□□ 1.32
ACTN1-220ENST00000556433 NOS2P35228 1153 aa23.28■■□□□ 1.32
ACTN1-220ENST00000556433 RACK1P63244 317 aaKnown RBP23.28■■□□□ 1.32
ACTN1-220ENST00000556433 MTA1Q13330 715 aa23.28■■□□□ 1.32
ACTN1-220ENST00000556433 ZNF177Q13360 481 aaPredicted RBP23.28■■□□□ 1.32
ACTN1-220ENST00000556433 DPCR1Q3MIW9 517 aa23.28■■□□□ 1.32
ACTN1-220ENST00000556433 KCNT1Q5JUK3 1230 aa23.28■■□□□ 1.32
ACTN1-220ENST00000556433 CXorf57Q6NSI4 855 aaKnown RBP23.28■■□□□ 1.32
ACTN1-220ENST00000556433 LRSAM1Q6UWE0 723 aa23.28■■□□□ 1.32
ACTN1-220ENST00000556433 SLC26A9Q7LBE3 791 aa23.28■■□□□ 1.32
ACTN1-220ENST00000556433 OR2T34Q8NGX1 318 aa23.28■■□□□ 1.32
ACTN1-220ENST00000556433 CDC6Q99741 560 aa23.28■■□□□ 1.32
ACTN1-220ENST00000556433 HS3ST4Q9Y661 456 aa23.28■■□□□ 1.32
ACTN1-220ENST00000556433 PAGE1O75459 146 aa23.27■■□□□ 1.32
ACTN1-220ENST00000556433 VAV1P15498 845 aa23.27■■□□□ 1.32
ACTN1-220ENST00000556433 ERCC5P28715 1186 aaPredicted RBP23.27■■□□□ 1.32
ACTN1-220ENST00000556433 CTSKP43235 329 aa23.27■■□□□ 1.32
ACTN1-220ENST00000556433 C21orf59P57076 290 aa23.27■■□□□ 1.32
ACTN1-220ENST00000556433 RNASE9P60153 205 aaKnown RBP23.27■■□□□ 1.32
ACTN1-220ENST00000556433 CENPCQ03188 943 aa23.27■■□□□ 1.32
ACTN1-220ENST00000556433 ELAVL3Q14576 367 aaKnown RBP23.27■■□□□ 1.32
ACTN1-220ENST00000556433 DRAP1Q14919 205 aaPredicted RBP23.27■■□□□ 1.32
ACTN1-220ENST00000556433 MIIPQ5JXC2 388 aa23.27■■□□□ 1.32
ACTN1-220ENST00000556433 DPY19L2P1Q6NXN4 242 aa23.27■■□□□ 1.32
ACTN1-220ENST00000556433 SND1Q7KZF4 910 aaKnown RBP eCLIP23.27■■□□□ 1.32
ACTN1-220ENST00000556433 ZDHHC17Q8IUH5 632 aa23.27■■□□□ 1.32
ACTN1-220ENST00000556433 AADATQ8N5Z0 425 aa23.27■■□□□ 1.32
ACTN1-220ENST00000556433 ZNF397Q8NF99 534 aaPredicted RBP23.27■■□□□ 1.32
ACTN1-220ENST00000556433 OR14C36Q8NHC7 312 aa23.27■■□□□ 1.32
ACTN1-220ENST00000556433 SLC6A18Q96N87 628 aa23.27■■□□□ 1.32
ACTN1-220ENST00000556433 ACE2Q9BYF1 805 aaPredicted RBP23.27■■□□□ 1.32
ACTN1-220ENST00000556433 SIK2Q9H0K1 926 aa23.27■■□□□ 1.32
ACTN1-220ENST00000556433 DACH1Q9UI36 760 aa23.27■■□□□ 1.32
ACTN1-220ENST00000556433 H0Y8X5 98 aa23.26■■□□□ 1.31
ACTN1-220ENST00000556433 VILLO15195 856 aa23.26■■□□□ 1.31
ACTN1-220ENST00000556433 GGCXP38435 758 aa23.26■■□□□ 1.31
ACTN1-220ENST00000556433 IRAK1P51617 712 aa23.26■■□□□ 1.31
ACTN1-220ENST00000556433 RAPGEF1Q13905 1077 aa23.26■■□□□ 1.31
ACTN1-220ENST00000556433 ACCSLQ4AC99 568 aa23.26■■□□□ 1.31
ACTN1-220ENST00000556433 C14orf80Q86SX3 495 aa23.26■■□□□ 1.31
ACTN1-220ENST00000556433 TMEM35BQ8NCS4 154 aa23.26■■□□□ 1.31
ACTN1-220ENST00000556433 BAHD1Q8TBE0 780 aaPredicted RBP23.26■■□□□ 1.31
ACTN1-220ENST00000556433 FRS2Q8WU20 508 aa23.26■■□□□ 1.31
ACTN1-220ENST00000556433 ALG14Q96F25 216 aa23.26■■□□□ 1.31
ACTN1-220ENST00000556433 FEM1AQ9BSK4 669 aa23.26■■□□□ 1.31
ACTN1-220ENST00000556433 EBF2Q9HAK2 575 aa23.26■■□□□ 1.31
ACTN1-220ENST00000556433 RRN3Q9NYV6 651 aa23.26■■□□□ 1.31
ACTN1-220ENST00000556433 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.26■■□□□ 1.31
ACTN1-220ENST00000556433 BTBD3Q9Y2F9 522 aa23.26■■□□□ 1.31
ACTN1-220ENST00000556433 PES1O00541 588 aaKnown RBP23.25■■□□□ 1.31
ACTN1-220ENST00000556433 CCT8P50990 548 aa23.25■■□□□ 1.31
ACTN1-220ENST00000556433 CCR5P51681 352 aa23.25■■□□□ 1.31
ACTN1-220ENST00000556433 KCNMA1Q12791 1236 aa23.25■■□□□ 1.31
ACTN1-220ENST00000556433 KCNJ12Q14500 433 aa23.25■■□□□ 1.31
ACTN1-220ENST00000556433 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP23.25■■□□□ 1.31
ACTN1-220ENST00000556433 OR52K2Q8NGK3 314 aa23.25■■□□□ 1.31
ACTN1-220ENST00000556433 SKA1Q96BD8 255 aa23.25■■□□□ 1.31
ACTN1-220ENST00000556433 SPAG5Q96R06 1193 aa23.25■■□□□ 1.31
ACTN1-220ENST00000556433 NPY6RQ99463 290 aa23.25■■□□□ 1.31
ACTN1-220ENST00000556433 WDCPQ9H6R7 721 aa23.25■■□□□ 1.31
ACTN1-220ENST00000556433 SLC25A13Q9UJS0 675 aa23.25■■□□□ 1.31
ACTN1-220ENST00000556433 SRRM3A6NNA2 597 aaPredicted RBP23.24■■□□□ 1.31
ACTN1-220ENST00000556433 CLDN11O75508 207 aa23.24■■□□□ 1.31
ACTN1-220ENST00000556433 ADCY5O95622 1261 aa23.24■■□□□ 1.31
ACTN1-220ENST00000556433 ATXN1LP0C7T5 689 aaKnown RBP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms