RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 OR10T2Q8NGX3 314 aa5.18□□□□□ -1.58
ATXN3-239ENST00000556315 ZBTB45Q96K62 511 aaPredicted RBP5.18□□□□□ -1.58
ATXN3-239ENST00000556315 SENP8Q96LD8 212 aa5.18□□□□□ -1.58
ATXN3-239ENST00000556315 CAMK1GQ96NX5 476 aa5.18□□□□□ -1.58
ATXN3-239ENST00000556315 JMJD8Q96S16 334 aa5.18□□□□□ -1.58
ATXN3-239ENST00000556315 CYP2S1Q96SQ9 504 aa5.18□□□□□ -1.58
ATXN3-239ENST00000556315 BHMT2Q9H2M3 363 aa5.18□□□□□ -1.58
ATXN3-239ENST00000556315 LINC00597Q9H2U6 94 aa5.18□□□□□ -1.58
ATXN3-239ENST00000556315 FAM124BQ9H5Z6 455 aaPredicted RBP5.18□□□□□ -1.58
ATXN3-239ENST00000556315 TMEM206Q9H813 350 aa5.18□□□□□ -1.58
ATXN3-239ENST00000556315 C17orf75Q9HAS0 396 aa5.18□□□□□ -1.58
ATXN3-239ENST00000556315 KMT5AQ9NQR1 393 aa5.18□□□□□ -1.58
ATXN3-239ENST00000556315 GPR27Q9NS67 375 aa5.18□□□□□ -1.58
ATXN3-239ENST00000556315 GJB4Q9NTQ9 266 aa5.18□□□□□ -1.58
ATXN3-239ENST00000556315 BCCIPQ9P287 314 aaKnown RBP eCLIP5.18□□□□□ -1.58
ATXN3-239ENST00000556315 ARHGAP28Q9P2N2 729 aa5.18□□□□□ -1.58
ATXN3-239ENST00000556315 UXTQ9UBK9 157 aaPredicted RBP5.18□□□□□ -1.58
ATXN3-239ENST00000556315 NPFFR2Q9Y5X5 522 aa5.18□□□□□ -1.58
ATXN3-239ENST00000556315 CYP46A1Q9Y6A2 500 aa5.18□□□□□ -1.58
ATXN3-239ENST00000556315 WNT6Q9Y6F9 365 aa5.18□□□□□ -1.58
ATXN3-239ENST00000556315 FLNBO75369 2602 aaKnown RBP5.18□□□□□ -1.58
ATXN3-239ENST00000556315 ZZEF1O43149 2961 aa5.18□□□□□ -1.58
ATXN3-239ENST00000556315 STK36Q9NRP7 1315 aa5.18□□□□□ -1.58
ATXN3-239ENST00000556315 TRAV19A0A0A6YYK7 116 aa5.17□□□□□ -1.58
ATXN3-239ENST00000556315 C7orf72A4D263 438 aa5.17□□□□□ -1.58
ATXN3-239ENST00000556315 TRABD2BA6NFA1 517 aa5.17□□□□□ -1.58
ATXN3-239ENST00000556315 CAPN8A6NHC0 703 aa5.17□□□□□ -1.58
ATXN3-239ENST00000556315 LACTBL1A8MY62 500 aa5.17□□□□□ -1.58
ATXN3-239ENST00000556315 BTBD18B2RXH4 712 aa5.17□□□□□ -1.58
ATXN3-239ENST00000556315 SGK1O00141 431 aa5.17□□□□□ -1.58
ATXN3-239ENST00000556315 PIRO00625 290 aa5.17□□□□□ -1.58
ATXN3-239ENST00000556315 GJB3O75712 270 aa5.17□□□□□ -1.58
ATXN3-239ENST00000556315 KLF8O95600 359 aaPredicted RBP5.17□□□□□ -1.58
ATXN3-239ENST00000556315 ASMTLO95671 621 aa5.17□□□□□ -1.58
ATXN3-239ENST00000556315 CKMP06732 381 aa5.17□□□□□ -1.58
ATXN3-239ENST00000556315 ADRB2P07550 413 aa5.17□□□□□ -1.58
ATXN3-239ENST00000556315 PLA2G2AP14555 144 aa5.17□□□□□ -1.58
ATXN3-239ENST00000556315 HNRNPLP14866 589 aaKnown RBP eCLIP5.17□□□□□ -1.58
ATXN3-239ENST00000556315 GNSP15586 552 aa5.17□□□□□ -1.58
ATXN3-239ENST00000556315 HDCP19113 662 aa5.17□□□□□ -1.58
ATXN3-239ENST00000556315 CCT6AP40227 531 aaKnown RBP5.17□□□□□ -1.58
ATXN3-239ENST00000556315 OPRD1P41143 372 aa5.17□□□□□ -1.58
ATXN3-239ENST00000556315 TNFRSF4P43489 277 aa5.17□□□□□ -1.58
ATXN3-239ENST00000556315 RPL10AP62906 217 aaKnown RBP5.17□□□□□ -1.58
ATXN3-239ENST00000556315 RPL11P62913 178 aaKnown RBP5.17□□□□□ -1.58
ATXN3-239ENST00000556315 NFKB2Q00653 900 aa5.17□□□□□ -1.58
ATXN3-239ENST00000556315 ZNF33AQ06730 810 aa5.17□□□□□ -1.58
ATXN3-239ENST00000556315 MCL1Q07820 350 aa5.17□□□□□ -1.58
ATXN3-239ENST00000556315 NOLC1Q14978 699 aaKnown RBP eCLIP5.17□□□□□ -1.58
ATXN3-239ENST00000556315 ZNF77Q15935 545 aa5.17□□□□□ -1.58
ATXN3-239ENST00000556315 NFE2Q16621 373 aaPredicted RBP5.17□□□□□ -1.58
ATXN3-239ENST00000556315 FNDC3BQ53EP0 1204 aaKnown RBP5.17□□□□□ -1.58
ATXN3-239ENST00000556315 SPATA1Q5VX52 437 aa5.17□□□□□ -1.58
ATXN3-239ENST00000556315 HAUS3Q68CZ6 603 aa5.17□□□□□ -1.58
ATXN3-239ENST00000556315 DENND5AQ6IQ26 1287 aa5.17□□□□□ -1.58
ATXN3-239ENST00000556315 TMC6Q7Z403 805 aa5.17□□□□□ -1.58
ATXN3-239ENST00000556315 LRRTM3Q86VH5 581 aa5.17□□□□□ -1.58
ATXN3-239ENST00000556315 CCDC103Q8IW40 242 aa5.17□□□□□ -1.58
ATXN3-239ENST00000556315 NAXDQ8IW45 347 aa5.17□□□□□ -1.58
ATXN3-239ENST00000556315 CD302Q8IX05 232 aa5.17□□□□□ -1.58
ATXN3-239ENST00000556315 ADGRG2Q8IZP9 1017 aa5.17□□□□□ -1.58
ATXN3-239ENST00000556315 ALLCQ8N6M5 410 aa5.17□□□□□ -1.58
ATXN3-239ENST00000556315 KIAA1958Q8N8K9 716 aa5.17□□□□□ -1.58
ATXN3-239ENST00000556315 FSIP1Q8NA03 581 aa5.17□□□□□ -1.58
ATXN3-239ENST00000556315 IL17RCQ8NAC3 791 aa5.17□□□□□ -1.58
ATXN3-239ENST00000556315 TP53I13Q8NBR0 393 aaPredicted RBP5.17□□□□□ -1.58
ATXN3-239ENST00000556315 SH3RF2Q8TEC5 729 aa5.17□□□□□ -1.58
ATXN3-239ENST00000556315 LRRC15Q8TF66 581 aa5.17□□□□□ -1.58
ATXN3-239ENST00000556315 HMGB4Q8WW32 186 aa5.17□□□□□ -1.58
ATXN3-239ENST00000556315 PNKPQ96T60 521 aa5.17□□□□□ -1.58
ATXN3-239ENST00000556315 ZDHHC5Q9C0B5 715 aa5.17□□□□□ -1.58
ATXN3-239ENST00000556315 TMEM60Q9H2L4 133 aa5.17□□□□□ -1.58
ATXN3-239ENST00000556315 FSCN3Q9NQT6 498 aa5.17□□□□□ -1.58
ATXN3-239ENST00000556315 SFMBT1Q9UHJ3 866 aa5.17□□□□□ -1.58
ATXN3-239ENST00000556315 TMEFF2Q9UIK5 374 aaPredicted RBP5.17□□□□□ -1.58
ATXN3-239ENST00000556315 MAGED2Q9UNF1 606 aaPredicted RBP5.17□□□□□ -1.58
ATXN3-239ENST00000556315 DNM3Q9UQ16 869 aa5.17□□□□□ -1.58
ATXN3-239ENST00000556315 RAI2Q9Y5P3 530 aa5.17□□□□□ -1.58
ATXN3-239ENST00000556315 COL4A2P08572 1712 aa5.17□□□□□ -1.58
ATXN3-239ENST00000556315 GREB1Q4ZG55 1949 aa5.17□□□□□ -1.58
ATXN3-239ENST00000556315 RALGAPA1Q6GYQ0 2036 aa5.16□□□□□ -1.58
ATXN3-239ENST00000556315 TCRBV21S2A2A0A5A6 115 aa5.16□□□□□ -1.58
ATXN3-239ENST00000556315 BLACEA4D250 179 aa5.16□□□□□ -1.58
ATXN3-239ENST00000556315 E9PAM4 449 aa5.16□□□□□ -1.58
ATXN3-239ENST00000556315 CYB561D2O14569 222 aa5.16□□□□□ -1.58
ATXN3-239ENST00000556315 SLC9A3R1O14745 358 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-239ENST00000556315 CAPN9O14815 690 aa5.16□□□□□ -1.58
ATXN3-239ENST00000556315 SLC16A4O15374 487 aa5.16□□□□□ -1.58
ATXN3-239ENST00000556315 BUB1BO60566 1050 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-239ENST00000556315 PFKFB2O60825 505 aa5.16□□□□□ -1.58
ATXN3-239ENST00000556315 CBFA2T3O75081 653 aa5.16□□□□□ -1.58
ATXN3-239ENST00000556315 HIP1RO75146 1068 aa5.16□□□□□ -1.58
ATXN3-239ENST00000556315 ZNF217O75362 1048 aa5.16□□□□□ -1.58
ATXN3-239ENST00000556315 NOL4O94818 638 aa5.16□□□□□ -1.58
ATXN3-239ENST00000556315 KAT7O95251 611 aa5.16□□□□□ -1.58
ATXN3-239ENST00000556315 PRB1P04280 392 aa5.16□□□□□ -1.58
ATXN3-239ENST00000556315 APODP05090 189 aa5.16□□□□□ -1.58
ATXN3-239ENST00000556315 CELA3BP08861 270 aa5.16□□□□□ -1.58
ATXN3-239ENST00000556315 CXCL8P10145 99 aa5.16□□□□□ -1.58
ATXN3-239ENST00000556315 PFKLP17858 780 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms