RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 SIK2Q9H0K1 926 aa11.89□□□□□ -0.51
SLIRP-205ENST00000556310 HAUS4Q9H6D7 363 aa11.89□□□□□ -0.51
SLIRP-205ENST00000556310 FBRSQ9HAH7 460 aa11.89□□□□□ -0.51
SLIRP-205ENST00000556310 PARD6AQ9NPB6 346 aa11.89□□□□□ -0.51
SLIRP-205ENST00000556310 INVSQ9Y283 1065 aa11.89□□□□□ -0.51
SLIRP-205ENST00000556310 PCDHGA5Q9Y5G8 931 aa11.89□□□□□ -0.51
SLIRP-205ENST00000556310 ITIH6Q6UXX5 1313 aa11.88□□□□□ -0.51
SLIRP-205ENST00000556310 ANKRD62A6NC57 917 aa11.88□□□□□ -0.51
SLIRP-205ENST00000556310 SIGLEC16A6NMB1 481 aa11.88□□□□□ -0.51
SLIRP-205ENST00000556310 HLA-EP13747 358 aa11.88□□□□□ -0.51
SLIRP-205ENST00000556310 GPD1P21695 349 aa11.88□□□□□ -0.51
SLIRP-205ENST00000556310 RFC1P35251 1148 aaPredicted RBP11.88□□□□□ -0.51
SLIRP-205ENST00000556310 COPAP53621 1224 aa11.88□□□□□ -0.51
SLIRP-205ENST00000556310 CDH4P55283 916 aa11.88□□□□□ -0.51
SLIRP-205ENST00000556310 ST8SIA6P61647 398 aa11.88□□□□□ -0.51
SLIRP-205ENST00000556310 SPEM2Q0P670 501 aa11.88□□□□□ -0.51
SLIRP-205ENST00000556310 CDO1Q16878 200 aa11.88□□□□□ -0.51
SLIRP-205ENST00000556310 C15orf59Q2T9L4 293 aaPredicted RBP11.88□□□□□ -0.51
SLIRP-205ENST00000556310 KIAA1324Q6UXG2 1013 aaKnown RBP11.88□□□□□ -0.51
SLIRP-205ENST00000556310 LRRC31Q6UY01 552 aa11.88□□□□□ -0.51
SLIRP-205ENST00000556310 ZNF571Q7Z3V5 609 aaPredicted RBP11.88□□□□□ -0.51
SLIRP-205ENST00000556310 LAPTM4BQ86VI4 370 aa11.88□□□□□ -0.51
SLIRP-205ENST00000556310 OR2T3Q8NH03 318 aa11.88□□□□□ -0.51
SLIRP-205ENST00000556310 CENPIQ92674 756 aaPredicted RBP11.88□□□□□ -0.51
SLIRP-205ENST00000556310 SYN2Q92777 582 aaPredicted RBP11.88□□□□□ -0.51
SLIRP-205ENST00000556310 ERLEC1Q96DZ1 483 aa11.88□□□□□ -0.51
SLIRP-205ENST00000556310 MYO19Q96H55 970 aa11.88□□□□□ -0.51
SLIRP-205ENST00000556310 VCPIP1Q96JH7 1222 aa11.88□□□□□ -0.51
SLIRP-205ENST00000556310 C1orf74Q96LT6 269 aa11.88□□□□□ -0.51
SLIRP-205ENST00000556310 MCEEQ96PE7 176 aa11.88□□□□□ -0.51
SLIRP-205ENST00000556310 XPO4Q9C0E2 1151 aaKnown RBP11.88□□□□□ -0.51
SLIRP-205ENST00000556310 MKRN2Q9H000 416 aaKnown RBP11.88□□□□□ -0.51
SLIRP-205ENST00000556310 SLC6A17Q9H1V8 727 aa11.88□□□□□ -0.51
SLIRP-205ENST00000556310 PRDM16Q9HAZ2 1276 aa11.88□□□□□ -0.51
SLIRP-205ENST00000556310 TAS2R14Q9NYV8 317 aa11.88□□□□□ -0.51
SLIRP-205ENST00000556310 MBD1Q9UIS9 605 aaPredicted RBP11.88□□□□□ -0.51
SLIRP-205ENST00000556310 USP18Q9UMW8 372 aa11.88□□□□□ -0.51
SLIRP-205ENST00000556310 CHD5Q8TDI0 1954 aa11.87□□□□□ -0.51
SLIRP-205ENST00000556310 IGLV3-10A0A075B6K4 115 aa11.87□□□□□ -0.51
SLIRP-205ENST00000556310 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.87□□□□□ -0.51
SLIRP-205ENST00000556310 IGHV1OR15-9A0A0B4J2B8 117 aa11.87□□□□□ -0.51
SLIRP-205ENST00000556310 E9PAM4 449 aa11.87□□□□□ -0.51
SLIRP-205ENST00000556310 DDX3XO00571 662 aaKnown RBP eCLIP11.87□□□□□ -0.514e-31■■■■□ 19.9
SLIRP-205ENST00000556310 FOXD2O60548 495 aaPredicted RBP11.87□□□□□ -0.51
SLIRP-205ENST00000556310 GYPCP04921 128 aa11.87□□□□□ -0.51
SLIRP-205ENST00000556310 SRPRAP08240 638 aaKnown RBP11.87□□□□□ -0.51
SLIRP-205ENST00000556310 GZMAP12544 262 aa11.87□□□□□ -0.51
SLIRP-205ENST00000556310 RRM1P23921 792 aa11.87□□□□□ -0.51
SLIRP-205ENST00000556310 MPLP40238 635 aa11.87□□□□□ -0.51
SLIRP-205ENST00000556310 ZNF143P52747 638 aaPredicted RBP11.87□□□□□ -0.51
SLIRP-205ENST00000556310 PLK1P53350 603 aa11.87□□□□□ -0.51
SLIRP-205ENST00000556310 HDAC4P56524 1084 aa11.87□□□□□ -0.51
SLIRP-205ENST00000556310 ZBED6P86452 979 aa11.87□□□□□ -0.51
SLIRP-205ENST00000556310 ECT2LQ008S8 904 aa11.87□□□□□ -0.51
SLIRP-205ENST00000556310 NRG1Q02297 640 aaPredicted RBP11.87□□□□□ -0.51
SLIRP-205ENST00000556310 LMNB2Q03252 620 aa11.87□□□□□ -0.51
SLIRP-205ENST00000556310 SULT2A1Q06520 285 aa11.87□□□□□ -0.51
SLIRP-205ENST00000556310 ZNF177Q13360 481 aaPredicted RBP11.87□□□□□ -0.51
SLIRP-205ENST00000556310 ARID5BQ14865 1188 aa11.87□□□□□ -0.51
SLIRP-205ENST00000556310 CSRP2Q16527 193 aa11.87□□□□□ -0.51
SLIRP-205ENST00000556310 ARL13BQ3SXY8 428 aa11.87□□□□□ -0.51
SLIRP-205ENST00000556310 TDRD12Q587J7 1177 aaKnown RBP11.87□□□□□ -0.51
SLIRP-205ENST00000556310 SPDYCQ5MJ68 293 aa11.87□□□□□ -0.51
SLIRP-205ENST00000556310 SWT1Q5T5J6 900 aaKnown RBP11.87□□□□□ -0.51
SLIRP-205ENST00000556310 WDR59Q6PJI9 974 aa11.87□□□□□ -0.51
SLIRP-205ENST00000556310 SLC36A4Q6YBV0 504 aa11.87□□□□□ -0.51
SLIRP-205ENST00000556310 LPCAT2Q7L5N7 544 aa11.87□□□□□ -0.51
SLIRP-205ENST00000556310 TMPRSS6Q8IU80 811 aa11.87□□□□□ -0.51
SLIRP-205ENST00000556310 APCDD1Q8J025 514 aa11.87□□□□□ -0.51
SLIRP-205ENST00000556310 ZNF366Q8N895 744 aa11.87□□□□□ -0.51
SLIRP-205ENST00000556310 FAM172AQ8WUF8 416 aa11.87□□□□□ -0.51
SLIRP-205ENST00000556310 NTAN1Q96AB6 310 aa11.87□□□□□ -0.51
SLIRP-205ENST00000556310 MRGPRX3Q96LB0 322 aa11.87□□□□□ -0.51
SLIRP-205ENST00000556310 PPP1R9BQ96SB3 815 aa11.87□□□□□ -0.51
SLIRP-205ENST00000556310 ARRDC1-AS1Q9H2J1 176 aa11.87□□□□□ -0.51
SLIRP-205ENST00000556310 TMPRSS4Q9NRS4 437 aa11.87□□□□□ -0.51
SLIRP-205ENST00000556310 SEMA4GQ9NTN9 838 aa11.87□□□□□ -0.51
SLIRP-205ENST00000556310 USP36Q9P275 1121 aaKnown RBP11.87□□□□□ -0.51
SLIRP-205ENST00000556310 CAPN11Q9UMQ6 739 aa11.87□□□□□ -0.51
SLIRP-205ENST00000556310 CYP8B1Q9UNU6 501 aa11.87□□□□□ -0.51
SLIRP-205ENST00000556310 ERVW-1Q9UQF0 538 aa11.87□□□□□ -0.51
SLIRP-205ENST00000556310 TBC1D30Q9Y2I9 924 aa11.87□□□□□ -0.51
SLIRP-205ENST00000556310 SNX10Q9Y5X0 201 aa11.87□□□□□ -0.51
SLIRP-205ENST00000556310 BZW2Q9Y6E2 419 aaKnown RBP11.87□□□□□ -0.51
SLIRP-205ENST00000556310 LAMA1P25391 3075 aa11.86□□□□□ -0.51
SLIRP-205ENST00000556310 BCLAF3A2AJT9 711 aaKnown RBP11.86□□□□□ -0.51
SLIRP-205ENST00000556310 DRGXA6NNA5 263 aa11.86□□□□□ -0.51
SLIRP-205ENST00000556310 TMCO5BA8MYB1 307 aa11.86□□□□□ -0.51
SLIRP-205ENST00000556310 AP5Z1O43299 807 aa11.86□□□□□ -0.51
SLIRP-205ENST00000556310 CCP110O43303 1012 aa11.86□□□□□ -0.51
SLIRP-205ENST00000556310 CBFA2T2O43439 604 aa11.86□□□□□ -0.51
SLIRP-205ENST00000556310 CNTN5O94779 1100 aa11.86□□□□□ -0.51
SLIRP-205ENST00000556310 IGLV3-19P01714 112 aa11.86□□□□□ -0.51
SLIRP-205ENST00000556310 SKILP12757 684 aa11.86□□□□□ -0.51
SLIRP-205ENST00000556310 DESP17661 470 aa11.86□□□□□ -0.51
SLIRP-205ENST00000556310 MZF1P28698 734 aaPredicted RBP11.86□□□□□ -0.51
SLIRP-205ENST00000556310 ADRA1BP35368 520 aa11.86□□□□□ -0.51
SLIRP-205ENST00000556310 CTSOP43234 321 aaPredicted RBP11.86□□□□□ -0.51
SLIRP-205ENST00000556310 RPL7AP62424 266 aaKnown RBP11.86□□□□□ -0.51
SLIRP-205ENST00000556310 RPL6Q02878 288 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms