RNA–Protein interactions for RNA: ENST00000555709.6

MTHFD1-211, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-211ENST00000555709 CPQQ9Y646 472 aa12.12□□□□□ -0.47
MTHFD1-211ENST00000555709 PCNX2A6NKB5 2137 aa12.11□□□□□ -0.47
MTHFD1-211ENST00000555709 EML5Q05BV3 1969 aa12.11□□□□□ -0.47
MTHFD1-211ENST00000555709 C3orf70A6NLC5 250 aaPredicted RBP12.11□□□□□ -0.47
MTHFD1-211ENST00000555709 RPP40O75818 363 aaKnown RBP12.11□□□□□ -0.47
MTHFD1-211ENST00000555709 APOEP02649 317 aa12.11□□□□□ -0.47
MTHFD1-211ENST00000555709 KRT1P04264 644 aa12.11□□□□□ -0.47
MTHFD1-211ENST00000555709 SLC2A3P11169 496 aa12.11□□□□□ -0.47
MTHFD1-211ENST00000555709 CASQ1P31415 396 aa12.11□□□□□ -0.47
MTHFD1-211ENST00000555709 DNA2P51530 1060 aa12.11□□□□□ -0.47
MTHFD1-211ENST00000555709 RWDD2BP57060 319 aa12.11□□□□□ -0.47
MTHFD1-211ENST00000555709 COG7P83436 770 aa12.11□□□□□ -0.47
MTHFD1-211ENST00000555709 USP4Q13107 963 aa12.11□□□□□ -0.47
MTHFD1-211ENST00000555709 SEMA3BQ13214 749 aa12.11□□□□□ -0.47
MTHFD1-211ENST00000555709 ARTNQ5T4W7 220 aa12.11□□□□□ -0.47
MTHFD1-211ENST00000555709 ERMARDQ5T6L9 678 aa12.11□□□□□ -0.47
MTHFD1-211ENST00000555709 NUGGCQ68CJ6 796 aa12.11□□□□□ -0.47
MTHFD1-211ENST00000555709 RIN3Q8TB24 985 aa12.11□□□□□ -0.47
MTHFD1-211ENST00000555709 RAPGEF5Q92565 580 aa12.11□□□□□ -0.47
MTHFD1-211ENST00000555709 IRF7Q92985 503 aa12.11□□□□□ -0.47
MTHFD1-211ENST00000555709 WBP2Q969T9 261 aa12.11□□□□□ -0.47
MTHFD1-211ENST00000555709 ZC3H10Q96K80 434 aaKnown RBP12.11□□□□□ -0.47
MTHFD1-211ENST00000555709 ZSWIM3Q96MP5 696 aa12.11□□□□□ -0.47
MTHFD1-211ENST00000555709 TRMT61BQ9BVS5 477 aaKnown RBP12.11□□□□□ -0.47
MTHFD1-211ENST00000555709 SMG9Q9H0W8 520 aaKnown RBP12.11□□□□□ -0.47
MTHFD1-211ENST00000555709 CARD9Q9H257 536 aa12.11□□□□□ -0.47
MTHFD1-211ENST00000555709 WDCPQ9H6R7 721 aa12.11□□□□□ -0.47
MTHFD1-211ENST00000555709 GKN1Q9NS71 199 aa12.11□□□□□ -0.47
MTHFD1-211ENST00000555709 DDX56Q9NY93 547 aaKnown RBP12.11□□□□□ -0.47
MTHFD1-211ENST00000555709 XPO7Q9UIA9 1087 aaKnown RBP12.11□□□□□ -0.47
MTHFD1-211ENST00000555709 NEU3Q9UQ49 428 aa12.11□□□□□ -0.47
MTHFD1-211ENST00000555709 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.11□□□□□ -0.47
MTHFD1-211ENST00000555709 ACACAQ13085 2346 aa12.11□□□□□ -0.47
MTHFD1-211ENST00000555709 ASCC3Q8N3C0 2202 aaKnown RBP12.11□□□□□ -0.47
MTHFD1-211ENST00000555709 DOCK4Q8N1I0 1966 aa12.1□□□□□ -0.47
MTHFD1-211ENST00000555709 APC2O95996 2303 aa12.1□□□□□ -0.47
MTHFD1-211ENST00000555709 FAM221BA6H8Z2 402 aa12.1□□□□□ -0.47
MTHFD1-211ENST00000555709 ARNTLO00327 626 aa12.1□□□□□ -0.47
MTHFD1-211ENST00000555709 KCNK3O14649 394 aa12.1□□□□□ -0.47
MTHFD1-211ENST00000555709 PAGE1O75459 146 aa12.1□□□□□ -0.47
MTHFD1-211ENST00000555709 KLKB1P03952 638 aa12.1□□□□□ -0.47
MTHFD1-211ENST00000555709 HMBSP08397 361 aa12.1□□□□□ -0.47
MTHFD1-211ENST00000555709 TCF3P15923 654 aa12.1□□□□□ -0.47
MTHFD1-211ENST00000555709 PRLRP16471 622 aa12.1□□□□□ -0.47
MTHFD1-211ENST00000555709 AVPR1AP37288 418 aa12.1□□□□□ -0.47
MTHFD1-211ENST00000555709 MLLT6P55198 1093 aaPredicted RBP12.1□□□□□ -0.47
MTHFD1-211ENST00000555709 TAZQ16635 292 aa12.1□□□□□ -0.47
MTHFD1-211ENST00000555709 ARL13BQ3SXY8 428 aa12.1□□□□□ -0.47
MTHFD1-211ENST00000555709 EFHC2Q5JST6 749 aa12.1□□□□□ -0.47
MTHFD1-211ENST00000555709 PIK3R6Q5UE93 754 aa12.1□□□□□ -0.47
MTHFD1-211ENST00000555709 MANEALQ5VSG8 457 aa12.1□□□□□ -0.47
MTHFD1-211ENST00000555709 Q6ZNB5 142 aa12.1□□□□□ -0.47
MTHFD1-211ENST00000555709 ANKS1BQ7Z6G8 1248 aa12.1□□□□□ -0.47
MTHFD1-211ENST00000555709 VSIG1Q86XK7 387 aa12.1□□□□□ -0.47
MTHFD1-211ENST00000555709 EXD1Q8NHP7 514 aa12.1□□□□□ -0.47
MTHFD1-211ENST00000555709 TSC1Q92574 1164 aa12.1□□□□□ -0.47
MTHFD1-211ENST00000555709 HSPH1Q92598 858 aa12.1□□□□□ -0.47
MTHFD1-211ENST00000555709 USP13Q92995 863 aaPredicted RBP12.1□□□□□ -0.47
MTHFD1-211ENST00000555709 RNF34Q969K3 372 aa12.1□□□□□ -0.47
MTHFD1-211ENST00000555709 BTN2A3PQ96KV6 586 aa12.1□□□□□ -0.47
MTHFD1-211ENST00000555709 HAPLN3Q96S86 360 aa12.1□□□□□ -0.47
MTHFD1-211ENST00000555709 KCTD15Q96SI1 283 aaPredicted RBP12.1□□□□□ -0.47
MTHFD1-211ENST00000555709 OSBPL9Q96SU4 736 aa12.1□□□□□ -0.47
MTHFD1-211ENST00000555709 PSMB7Q99436 277 aa12.1□□□□□ -0.47
MTHFD1-211ENST00000555709 MAGEB5Q9BZ81 275 aa12.1□□□□□ -0.47
MTHFD1-211ENST00000555709 SLITRK6Q9H5Y7 841 aa12.1□□□□□ -0.47
MTHFD1-211ENST00000555709 PCDH18Q9HCL0 1135 aa12.1□□□□□ -0.47
MTHFD1-211ENST00000555709 CCL26Q9Y258 94 aa12.1□□□□□ -0.47
MTHFD1-211ENST00000555709 CFAP46Q8IYW2 2715 aa12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 CCDC163A0A0D9SF12 145 aa12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 LNP1A1A4G5 178 aa12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 LRRD1A4D1F6 860 aa12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 LEFTY2O00292 366 aa12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 CES2O00748 559 aa12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 LATS1O95835 1130 aa12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 MOCS2O96007 188 aaPredicted RBP12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 CD48P09326 243 aa12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 IRF1P10914 325 aa12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 PYGMP11217 842 aa12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 TCP1P17987 556 aaKnown RBP12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 CORO1AP31146 461 aaKnown RBP12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 GDI1P31150 447 aa12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 L1CAMP32004 1257 aa12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 CXCR5P32302 372 aa12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 PTPN7P35236 360 aa12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 CDKN2BP42772 138 aa12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 CDH6P55285 790 aa12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 NRG1Q02297 640 aaPredicted RBP12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 MTA1Q13330 715 aa12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 ZNF211Q13398 564 aaPredicted RBP12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 DPYSL3Q14195 570 aa12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 LRRC32Q14392 662 aa12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 PDK2Q15119 407 aa12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 ZNF77Q15935 545 aa12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 PPP2R5EQ16537 467 aa12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 FAM133BQ5BKY9 247 aaKnown RBP12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 MS4A13Q5J8X5 152 aa12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 FAM78AQ5JUQ0 283 aa12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 NADSYN1Q6IA69 706 aa12.09□□□□□ -0.47
MTHFD1-211ENST00000555709 MFSD7Q6UXD7 560 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms