RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 LMLNQ96KR4 655 aa9.94□□□□□ -0.82
ACTN1-215ENST00000555616 BTN2A3PQ96KV6 586 aa9.94□□□□□ -0.82
ACTN1-215ENST00000555616 MRGPRX1Q96LB2 322 aa9.94□□□□□ -0.82
ACTN1-215ENST00000555616 C16orf45Q96MC5 204 aaPredicted RBP9.94□□□□□ -0.82
ACTN1-215ENST00000555616 CIPCQ9C0C6 399 aa9.94□□□□□ -0.82
ACTN1-215ENST00000555616 ARRDC1-AS1Q9H2J1 176 aa9.94□□□□□ -0.82
ACTN1-215ENST00000555616 OSGEPQ9NPF4 335 aa9.94□□□□□ -0.82
ACTN1-215ENST00000555616 VPS45Q9NRW7 570 aa9.94□□□□□ -0.82
ACTN1-215ENST00000555616 ABCB8Q9NUT2 735 aa9.94□□□□□ -0.82
ACTN1-215ENST00000555616 XPO7Q9UIA9 1087 aaKnown RBP9.94□□□□□ -0.82
ACTN1-215ENST00000555616 MBD1Q9UIS9 605 aaPredicted RBP9.94□□□□□ -0.82
ACTN1-215ENST00000555616 GGA2Q9UJY4 613 aa9.94□□□□□ -0.82
ACTN1-215ENST00000555616 INVSQ9Y283 1065 aa9.94□□□□□ -0.82
ACTN1-215ENST00000555616 RAD54BQ9Y620 910 aa9.94□□□□□ -0.82
ACTN1-215ENST00000555616 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.94□□□□□ -0.82
ACTN1-215ENST00000555616 PLXND1Q9Y4D7 1925 aa9.94□□□□□ -0.82
ACTN1-215ENST00000555616 TCRBV5S1A1TA0A578 114 aa9.93□□□□□ -0.82
ACTN1-215ENST00000555616 TYW5A2RUC4 315 aaKnown RBP9.93□□□□□ -0.82
ACTN1-215ENST00000555616 TMEM191CA6NGB0 347 aa9.93□□□□□ -0.82
ACTN1-215ENST00000555616 KCNU1A8MYU2 1149 aa9.93□□□□□ -0.82
ACTN1-215ENST00000555616 ZNF217O75362 1048 aa9.93□□□□□ -0.82
ACTN1-215ENST00000555616 GRAP2O75791 330 aa9.93□□□□□ -0.82
ACTN1-215ENST00000555616 MOCS2O96007 188 aaPredicted RBP9.93□□□□□ -0.82
ACTN1-215ENST00000555616 C7P10643 843 aa9.93□□□□□ -0.82
ACTN1-215ENST00000555616 GPD1P21695 349 aa9.93□□□□□ -0.82
ACTN1-215ENST00000555616 SDHBP21912 280 aa9.93□□□□□ -0.82
ACTN1-215ENST00000555616 PRKCHP24723 683 aa9.93□□□□□ -0.82
ACTN1-215ENST00000555616 CCR1P32246 355 aa9.93□□□□□ -0.82
ACTN1-215ENST00000555616 CD70P32970 193 aa9.93□□□□□ -0.82
ACTN1-215ENST00000555616 RFC1P35251 1148 aaPredicted RBP9.93□□□□□ -0.82
ACTN1-215ENST00000555616 MATKP42679 507 aa9.93□□□□□ -0.82
ACTN1-215ENST00000555616 RNASE9P60153 205 aaKnown RBP9.93□□□□□ -0.82
ACTN1-215ENST00000555616 RPL7AP62424 266 aaKnown RBP9.93□□□□□ -0.82
ACTN1-215ENST00000555616 RPS24P62847 133 aaKnown RBP9.93□□□□□ -0.82
ACTN1-215ENST00000555616 MTA1Q13330 715 aa9.93□□□□□ -0.82
ACTN1-215ENST00000555616 PIGHQ14442 188 aaPredicted RBP9.93□□□□□ -0.82
ACTN1-215ENST00000555616 PUM1Q14671 1186 aaKnown RBP eCLIP9.93□□□□□ -0.825e-6■■■□□ 17
ACTN1-215ENST00000555616 STARD3Q14849 445 aa9.93□□□□□ -0.82
ACTN1-215ENST00000555616 RSPO4Q2I0M5 234 aaPredicted RBP9.93□□□□□ -0.82
ACTN1-215ENST00000555616 FUT11Q495W5 492 aa9.93□□□□□ -0.82
ACTN1-215ENST00000555616 ZNF569Q5MCW4 686 aa9.93□□□□□ -0.82
ACTN1-215ENST00000555616 SPDYCQ5MJ68 293 aa9.93□□□□□ -0.82
ACTN1-215ENST00000555616 C11orf63Q6NUN7 778 aa9.93□□□□□ -0.82
ACTN1-215ENST00000555616 CHST9Q7L1S5 443 aa9.93□□□□□ -0.82
ACTN1-215ENST00000555616 DAAM2Q86T65 1068 aa9.93□□□□□ -0.82
ACTN1-215ENST00000555616 CHSY1Q86X52 802 aa9.93□□□□□ -0.82
ACTN1-215ENST00000555616 MFN1Q8IWA4 741 aa9.93□□□□□ -0.82
ACTN1-215ENST00000555616 FIBINQ8TAL6 211 aa9.93□□□□□ -0.82
ACTN1-215ENST00000555616 NETO1Q8TDF5 533 aa9.93□□□□□ -0.82
ACTN1-215ENST00000555616 SORCS1Q8WY21 1168 aa9.93□□□□□ -0.82
ACTN1-215ENST00000555616 PRMT1Q99873 361 aaKnown RBP9.93□□□□□ -0.82
ACTN1-215ENST00000555616 NCAPGQ9BPX3 1015 aa9.93□□□□□ -0.82
ACTN1-215ENST00000555616 TMEM245Q9H330 911 aa9.93□□□□□ -0.82
ACTN1-215ENST00000555616 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.93□□□□□ -0.82
ACTN1-215ENST00000555616 DDIT4Q9NX09 232 aa9.93□□□□□ -0.82
ACTN1-215ENST00000555616 SALL4Q9UJQ4 1053 aa9.93□□□□□ -0.82
ACTN1-215ENST00000555616 TMEM59LQ9UK28 342 aa9.93□□□□□ -0.82
ACTN1-215ENST00000555616 CDV3Q9UKY7 258 aaKnown RBP9.93□□□□□ -0.82
ACTN1-215ENST00000555616 CAPN6Q9Y6Q1 641 aa9.93□□□□□ -0.82
ACTN1-215ENST00000555616 ATG2BQ96BY7 2078 aa9.92□□□□□ -0.82
ACTN1-215ENST00000555616 IGHV1OR15-9A0A0B4J2B8 117 aa9.92□□□□□ -0.82
ACTN1-215ENST00000555616 C2CD4BA6NLJ0 364 aa9.92□□□□□ -0.82
ACTN1-215ENST00000555616 TMEM110-MUSTN1A8MSY1 372 aa9.92□□□□□ -0.82
ACTN1-215ENST00000555616 WASH3PC4AMC7 463 aa9.92□□□□□ -0.82
ACTN1-215ENST00000555616 ZBTB24O43167 697 aaPredicted RBP9.92□□□□□ -0.82
ACTN1-215ENST00000555616 BUB1BO60566 1050 aaPredicted RBP9.92□□□□□ -0.82
ACTN1-215ENST00000555616 PALMO75781 387 aa9.92□□□□□ -0.82
ACTN1-215ENST00000555616 PROSCO94903 275 aa9.92□□□□□ -0.82
ACTN1-215ENST00000555616 LUC7L3O95232 432 aaKnown RBP9.92□□□□□ -0.82
ACTN1-215ENST00000555616 GJB6O95452 261 aa9.92□□□□□ -0.82
ACTN1-215ENST00000555616 DLDP09622 509 aaKnown RBP9.92□□□□□ -0.82
ACTN1-215ENST00000555616 PDGFRAP16234 1089 aa9.92□□□□□ -0.82
ACTN1-215ENST00000555616 TACR2P21452 398 aa9.92□□□□□ -0.82
ACTN1-215ENST00000555616 PSMA2P25787 234 aa9.92□□□□□ -0.82
ACTN1-215ENST00000555616 SDC4P31431 198 aa9.92□□□□□ -0.82
ACTN1-215ENST00000555616 MAN1A1P33908 653 aa9.92□□□□□ -0.82
ACTN1-215ENST00000555616 NOS2P35228 1153 aa9.92□□□□□ -0.82
ACTN1-215ENST00000555616 SLC1A1P43005 524 aa9.92□□□□□ -0.82
ACTN1-215ENST00000555616 ZNF143P52747 638 aaPredicted RBP9.92□□□□□ -0.82
ACTN1-215ENST00000555616 ETF1P62495 437 aaKnown RBP9.92□□□□□ -0.82
ACTN1-215ENST00000555616 CREB5Q02930 508 aa9.92□□□□□ -0.82
ACTN1-215ENST00000555616 CAMK2GQ13555 558 aaPredicted RBP9.92□□□□□ -0.82
ACTN1-215ENST00000555616 CDH18Q13634 790 aa9.92□□□□□ -0.82
ACTN1-215ENST00000555616 MESDQ14696 234 aa9.92□□□□□ -0.82
ACTN1-215ENST00000555616 ACAP1Q15027 740 aa9.92□□□□□ -0.82
ACTN1-215ENST00000555616 SF3A2Q15428 464 aaKnown RBP9.92□□□□□ -0.82
ACTN1-215ENST00000555616 PTPRNQ16849 979 aa9.92□□□□□ -0.82
ACTN1-215ENST00000555616 DNTTIP2Q5QJE6 756 aaKnown RBP9.92□□□□□ -0.82
ACTN1-215ENST00000555616 TTC39BQ5VTQ0 682 aaPredicted RBP9.92□□□□□ -0.82
ACTN1-215ENST00000555616 RAP1GAP2Q684P5 730 aa9.92□□□□□ -0.82
ACTN1-215ENST00000555616 MBLAC2Q68D91 279 aa9.92□□□□□ -0.82
ACTN1-215ENST00000555616 SERPINA13PQ6UXR4 307 aa9.92□□□□□ -0.82
ACTN1-215ENST00000555616 NYAP1Q6ZVC0 841 aa9.92□□□□□ -0.82
ACTN1-215ENST00000555616 LPCAT2Q7L5N7 544 aa9.92□□□□□ -0.82
ACTN1-215ENST00000555616 PEX26Q7Z412 305 aa9.92□□□□□ -0.82
ACTN1-215ENST00000555616 CYP2U1Q7Z449 544 aa9.92□□□□□ -0.82
ACTN1-215ENST00000555616 METTL3Q86U44 580 aaKnown RBP9.92□□□□□ -0.82
ACTN1-215ENST00000555616 LGI2Q8N0V4 545 aa9.92□□□□□ -0.82
ACTN1-215ENST00000555616 PGBD3Q8N328 593 aa9.92□□□□□ -0.82
ACTN1-215ENST00000555616 FRMD1Q8N878 549 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms