RNA–Protein interactions for RNA: ENST00000555332.5

LINC01197-202, Transcript of long intergenic non-protein coding RNA 1197, humanhuman

TSL 3 BASIC

Gene LINC01197, Length 3,568 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01197-202ENST00000555332 SEMA4BQ9NPR2 832 aaPredicted RBP4.8□□□□□ -1.64
LINC01197-202ENST00000555332 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.8□□□□□ -1.64
LINC01197-202ENST00000555332 SIRT3Q9NTG7 399 aaPredicted RBP4.8□□□□□ -1.64
LINC01197-202ENST00000555332 SOHLH2Q9NX45 425 aa4.8□□□□□ -1.64
LINC01197-202ENST00000555332 LIPT1Q9Y234 373 aa4.8□□□□□ -1.64
LINC01197-202ENST00000555332 CLDN16Q9Y5I7 305 aa4.8□□□□□ -1.64
LINC01197-202ENST00000555332 LAMB2P55268 1798 aa4.8□□□□□ -1.64
LINC01197-202ENST00000555332 SPATA31A1Q5TZJ5 1347 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 VGLL3A8MV65 326 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 PRPF4O43172 522 aaKnown RBP eCLIP4.79□□□□□ -1.64
LINC01197-202ENST00000555332 FOXD2O60548 495 aaPredicted RBP4.79□□□□□ -1.64
LINC01197-202ENST00000555332 PRAMEF12O95522 483 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 PRLP01236 227 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 C4BPAP04003 597 aaKnown RBP4.79□□□□□ -1.64
LINC01197-202ENST00000555332 IL10P22301 178 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 KCNA5P22460 613 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 SDHAP31040 664 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 NME5P56597 212 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 GMFBP60983 142 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 IKQ13123 557 aaPredicted RBP4.79□□□□□ -1.64
LINC01197-202ENST00000555332 KCNAB1Q14722 419 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 FAM90A1Q86YD7 464 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 ZGPATQ8N5A5 531 aaKnown RBP4.79□□□□□ -1.64
LINC01197-202ENST00000555332 RTL3Q8N8U3 475 aaKnown RBP4.79□□□□□ -1.64
LINC01197-202ENST00000555332 IL17RCQ8NAC3 791 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 NUDT8Q8WV74 236 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 DBNDD2Q9BQY9 259 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 PFDN4Q9NQP4 134 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 CNIH4Q9P003 139 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 SLCO3A1Q9UIG8 710 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 COL5A2P05997 1499 aaPredicted RBP4.79□□□□□ -1.64
LINC01197-202ENST00000555332 PSMD14O00487 310 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 ADAM11O75078 769 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 HMGCRP04035 888 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 ANXA6P08133 673 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 NCF1P14598 390 aaPredicted RBP4.79□□□□□ -1.64
LINC01197-202ENST00000555332 VAV1P15498 845 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 HOXC8P31273 242 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 BSGP35613 385 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 MAGEA4P43358 317 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 MRPL12P52815 198 aaKnown RBP4.79□□□□□ -1.64
LINC01197-202ENST00000555332 GBX2P52951 348 aaPredicted RBP4.79□□□□□ -1.64
LINC01197-202ENST00000555332 PCBP4P57723 403 aaKnown RBP4.79□□□□□ -1.64
LINC01197-202ENST00000555332 TMEM115Q12893 351 aaPredicted RBP4.79□□□□□ -1.64
LINC01197-202ENST00000555332 FOXC1Q12948 553 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 RAB32Q13637 225 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 PCLAFQ15004 111 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 NTRK2Q16620 822 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 SLC5A9Q2M3M2 681 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 SLC44A4Q53GD3 710 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 GKAP1Q5VSY0 366 aaPredicted RBP4.79□□□□□ -1.64
LINC01197-202ENST00000555332 TAF3Q5VWG9 929 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 TBC1D9BQ66K14 1250 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 ZDHHC24Q6UX98 284 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 LINC00116Q8NCU8 138 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 HIPK4Q8NE63 616 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 PRPF31Q8WWY3 499 aaKnown RBP4.79□□□□□ -1.64
LINC01197-202ENST00000555332 METTL21AQ8WXB1 218 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 ADAD1Q96M93 576 aaKnown RBP4.79□□□□□ -1.64
LINC01197-202ENST00000555332 TUBB6Q9BUF5 446 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 GCOM2Q9BZD3 368 aaPredicted RBP4.79□□□□□ -1.64
LINC01197-202ENST00000555332 WDCPQ9H6R7 721 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 YY1AP1Q9H869 796 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 FSCN3Q9NQT6 498 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 TTC41PQ6P2S7 1318 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 CNTNAP4Q9C0A0 1308 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.79□□□□□ -1.64
LINC01197-202ENST00000555332 FRMD3A2A2Y4 597 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 EME2A4GXA9 379 aaPredicted RBP4.79□□□□□ -1.64
LINC01197-202ENST00000555332 GLOD5A6NK44 160 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 J3KTA2 159 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 F2RL2O00254 374 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 MTRF1O75570 445 aaKnown RBP4.79□□□□□ -1.64
LINC01197-202ENST00000555332 PRDM1O75626 825 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 NTSR2O95665 410 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 YPEL5P62699 121 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 GABPB1Q06547 395 aaPredicted RBP4.79□□□□□ -1.64
LINC01197-202ENST00000555332 ELP6Q0PNE2 266 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 TCP10Q12799 353 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 RTP2Q5QGT7 225 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 SUSD4Q5VX71 490 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 CES4AQ5XG92 561 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 MTHFD1LQ6UB35 978 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 CLEC17AQ6ZS10 378 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 ARHGAP27Q6ZUM4 889 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 ARMCX2Q7L311 632 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 CCDC110Q8TBZ0 833 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 DUSP19Q8WTR2 217 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 SLC13A3Q8WWT9 602 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 CPT1BQ92523 772 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 NACC2Q96BF6 587 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 ZDHHC12Q96GR4 267 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 RUFY1Q96T51 708 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 PRRX2Q99811 253 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 TAOK3Q9H2K8 898 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 GIMAP4Q9NUV9 329 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 HSPBP1Q9NZL4 362 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 PRDM4Q9UKN5 801 aa4.79□□□□□ -1.64
LINC01197-202ENST00000555332 FAM171A2A8MVW0 826 aa4.78□□□□□ -1.64
LINC01197-202ENST00000555332 KIF28PB7ZC32 967 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms