RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 FSD1LQ9BXM9 530 aa12.13□□□□□ -0.47
XRCC3-208ENST00000554811 SSU72Q9NP77 194 aaKnown RBP12.13□□□□□ -0.47
XRCC3-208ENST00000554811 COPG2Q9UBF2 871 aa12.13□□□□□ -0.47
XRCC3-208ENST00000554811 ARHGAP26Q9UNA1 814 aa12.13□□□□□ -0.47
XRCC3-208ENST00000554811 DTNAQ9Y4J8 743 aa12.13□□□□□ -0.47
XRCC3-208ENST00000554811 IGKV6D-21A0A0A0MT36 114 aa12.12□□□□□ -0.47
XRCC3-208ENST00000554811 BCLAF3A2AJT9 711 aaKnown RBP12.12□□□□□ -0.47
XRCC3-208ENST00000554811 XPO1O14980 1071 aaKnown RBP12.12□□□□□ -0.47
XRCC3-208ENST00000554811 MT-CYBP00156 380 aaPredicted RBP12.12□□□□□ -0.47
XRCC3-208ENST00000554811 C2P06681 752 aa12.12□□□□□ -0.47
XRCC3-208ENST00000554811 TKTP29401 623 aaKnown RBP12.12□□□□□ -0.47
XRCC3-208ENST00000554811 CCNA1P78396 465 aa12.12□□□□□ -0.47
XRCC3-208ENST00000554811 DLG1Q12959 904 aa12.12□□□□□ -0.47
XRCC3-208ENST00000554811 ACAP1Q15027 740 aa12.12□□□□□ -0.47
XRCC3-208ENST00000554811 FSCBQ5H9T9 825 aa12.12□□□□□ -0.47
XRCC3-208ENST00000554811 ARMCX6Q7L4S7 300 aa12.12□□□□□ -0.47
XRCC3-208ENST00000554811 PLPPR4Q7Z2D5 763 aa12.12□□□□□ -0.47
XRCC3-208ENST00000554811 IFNEQ86WN2 208 aa12.12□□□□□ -0.47
XRCC3-208ENST00000554811 ENDOVQ8N8Q3 282 aaKnown RBP12.12□□□□□ -0.47
XRCC3-208ENST00000554811 CEP70Q8NHQ1 597 aa12.12□□□□□ -0.47
XRCC3-208ENST00000554811 DIS3LQ8TF46 1054 aaKnown RBP12.12□□□□□ -0.47
XRCC3-208ENST00000554811 TRPV6Q9H1D0 765 aa12.12□□□□□ -0.47
XRCC3-208ENST00000554811 DCDC2Q9UHG0 476 aa12.12□□□□□ -0.47
XRCC3-208ENST00000554811 E7ENQ6 273 aa12.12□□□□□ -0.47
XRCC3-208ENST00000554811 PGAM1P18669 254 aa12.12□□□□□ -0.47
XRCC3-208ENST00000554811 GSTT1P30711 240 aa12.12□□□□□ -0.47
XRCC3-208ENST00000554811 ARPP19P56211 112 aa12.12□□□□□ -0.47
XRCC3-208ENST00000554811 SATB1Q01826 763 aa12.12□□□□□ -0.47
XRCC3-208ENST00000554811 SLC12A1Q13621 1099 aa12.12□□□□□ -0.47
XRCC3-208ENST00000554811 KRT72Q14CN4 511 aa12.12□□□□□ -0.47
XRCC3-208ENST00000554811 DGKDQ16760 1214 aa12.12□□□□□ -0.47
XRCC3-208ENST00000554811 SFT2D3Q587I9 215 aa12.12□□□□□ -0.47
XRCC3-208ENST00000554811 FSTL4Q6MZW2 842 aa12.12□□□□□ -0.47
XRCC3-208ENST00000554811 CYP4V2Q6ZWL3 525 aaPredicted RBP12.12□□□□□ -0.47
XRCC3-208ENST00000554811 DHDDSQ86SQ9 333 aa12.12□□□□□ -0.47
XRCC3-208ENST00000554811 ZBTB46Q86UZ6 589 aa12.12□□□□□ -0.47
XRCC3-208ENST00000554811 NPAS2Q99743 824 aa12.12□□□□□ -0.47
XRCC3-208ENST00000554811 SH3GL3Q99963 347 aa12.12□□□□□ -0.47
XRCC3-208ENST00000554811 NMRAL1Q9HBL8 299 aa12.12□□□□□ -0.47
XRCC3-208ENST00000554811 COL2A1P02458 1487 aaPredicted RBP12.12□□□□□ -0.47
XRCC3-208ENST00000554811 A0A1B0GVG6 124 aa12.12□□□□□ -0.47
XRCC3-208ENST00000554811 SPTLC1O15269 473 aa12.12□□□□□ -0.47
XRCC3-208ENST00000554811 TGDSO95455 350 aa12.12□□□□□ -0.47
XRCC3-208ENST00000554811 DHRS4L1P0CG22 281 aa12.12□□□□□ -0.47
XRCC3-208ENST00000554811 GABRB2P47870 512 aa12.12□□□□□ -0.47
XRCC3-208ENST00000554811 LAMC2Q13753 1193 aa12.12□□□□□ -0.47
XRCC3-208ENST00000554811 CSHL1Q14406 222 aa12.12□□□□□ -0.47
XRCC3-208ENST00000554811 NET1Q7Z628 596 aaPredicted RBP12.12□□□□□ -0.47
XRCC3-208ENST00000554811 LDB1Q86U70 411 aaPredicted RBP12.12□□□□□ -0.47
XRCC3-208ENST00000554811 C12orf42Q96LP6 360 aa12.12□□□□□ -0.47
XRCC3-208ENST00000554811 FCRL3Q96P31 734 aaPredicted RBP12.12□□□□□ -0.47
XRCC3-208ENST00000554811 CENPKQ9BS16 269 aa12.12□□□□□ -0.47
XRCC3-208ENST00000554811 CDH22Q9UJ99 828 aa12.12□□□□□ -0.47
XRCC3-208ENST00000554811 SH3BP1Q9Y3L3 701 aa12.12□□□□□ -0.47
XRCC3-208ENST00000554811 RNASEH1O60930 286 aaKnown RBP12.11□□□□□ -0.47
XRCC3-208ENST00000554811 OR6B1O95007 311 aa12.11□□□□□ -0.47
XRCC3-208ENST00000554811 HMBSP08397 361 aa12.11□□□□□ -0.47
XRCC3-208ENST00000554811 FGF3P11487 239 aaPredicted RBP12.11□□□□□ -0.47
XRCC3-208ENST00000554811 COX4I1P13073 169 aa12.11□□□□□ -0.47
XRCC3-208ENST00000554811 TAF6P49848 677 aa12.11□□□□□ -0.47
XRCC3-208ENST00000554811 PRPSAP1Q14558 356 aa12.11□□□□□ -0.47
XRCC3-208ENST00000554811 PCLAFQ15004 111 aa12.11□□□□□ -0.47
XRCC3-208ENST00000554811 HSF5Q4G112 596 aaPredicted RBP12.11□□□□□ -0.47
XRCC3-208ENST00000554811 ZNF484Q5JVG2 852 aa12.11□□□□□ -0.47
XRCC3-208ENST00000554811 NOTUMQ6P988 496 aa12.11□□□□□ -0.47
XRCC3-208ENST00000554811 ACAD11Q709F0 780 aa12.11□□□□□ -0.47
XRCC3-208ENST00000554811 DENND6AQ8IWF6 608 aa12.11□□□□□ -0.47
XRCC3-208ENST00000554811 URGCPQ8TCY9 931 aa12.11□□□□□ -0.47
XRCC3-208ENST00000554811 DNAJC1Q96KC8 554 aaKnown RBP12.11□□□□□ -0.47
XRCC3-208ENST00000554811 ILKAPQ9H0C8 392 aaPredicted RBP12.11□□□□□ -0.47
XRCC3-208ENST00000554811 PIGVQ9NUD9 493 aa12.11□□□□□ -0.47
XRCC3-208ENST00000554811 SIRPGQ9P1W8 387 aa12.11□□□□□ -0.47
XRCC3-208ENST00000554811 SCN1AP35498 2009 aa12.11□□□□□ -0.47
XRCC3-208ENST00000554811 ASB14A6NK59 587 aa12.11□□□□□ -0.47
XRCC3-208ENST00000554811 FAM159BA6NKW6 160 aa12.11□□□□□ -0.47
XRCC3-208ENST00000554811 GOLGA8CPA6NN73 597 aa12.11□□□□□ -0.47
XRCC3-208ENST00000554811 PRKCHP24723 683 aa12.11□□□□□ -0.47
XRCC3-208ENST00000554811 ETFBP38117 255 aa12.11□□□□□ -0.47
XRCC3-208ENST00000554811 ACTR3P61158 418 aa12.11□□□□□ -0.47
XRCC3-208ENST00000554811 MPP1Q00013 466 aa12.11□□□□□ -0.47
XRCC3-208ENST00000554811 NOMO2Q5JPE7 1267 aa12.11□□□□□ -0.47
XRCC3-208ENST00000554811 KYAT3Q6YP21 454 aaKnown RBP12.11□□□□□ -0.47
XRCC3-208ENST00000554811 PDZD4Q76G19 769 aaPredicted RBP12.11□□□□□ -0.47
XRCC3-208ENST00000554811 ZNF534Q76KX8 674 aa12.11□□□□□ -0.47
XRCC3-208ENST00000554811 MAPK15Q8TD08 544 aa12.11□□□□□ -0.47
XRCC3-208ENST00000554811 SLC35F5Q8WV83 523 aa12.11□□□□□ -0.47
XRCC3-208ENST00000554811 TNIP3Q96KP6 325 aa12.11□□□□□ -0.47
XRCC3-208ENST00000554811 PHF12Q96QT6 1004 aa12.11□□□□□ -0.47
XRCC3-208ENST00000554811 GRIP2Q9C0E4 1043 aa12.11□□□□□ -0.47
XRCC3-208ENST00000554811 KLHL4Q9C0H6 718 aa12.11□□□□□ -0.47
XRCC3-208ENST00000554811 LRRC40Q9H9A6 602 aa12.11□□□□□ -0.47
XRCC3-208ENST00000554811 PRDM16Q9HAZ2 1276 aa12.11□□□□□ -0.47
XRCC3-208ENST00000554811 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.11□□□□□ -0.47
XRCC3-208ENST00000554811 DDX43Q9NXZ2 648 aaKnown RBP12.11□□□□□ -0.47
XRCC3-208ENST00000554811 ADAMTS5Q9UNA0 930 aa12.11□□□□□ -0.47
XRCC3-208ENST00000554811 QSER1Q2KHR3 1735 aa12.11□□□□□ -0.47
XRCC3-208ENST00000554811 TTC24A2A3L6 582 aaPredicted RBP12.1□□□□□ -0.47
XRCC3-208ENST00000554811 GABBR2O75899 941 aa12.1□□□□□ -0.47
XRCC3-208ENST00000554811 SLC25A27O95847 323 aa12.1□□□□□ -0.47
XRCC3-208ENST00000554811 NMBRP28336 390 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms