RNA–Protein interactions for RNA: ENST00000554731.1

RDH11-207, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 888 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-207ENST00000554731 BTN2A3PQ96KV6 586 aa12.89□□□□□ -0.35
RDH11-207ENST00000554731 RPL10LQ96L21 214 aaKnown RBP12.89□□□□□ -0.35
RDH11-207ENST00000554731 TBC1D3DA0A087WVF3 549 aa12.88□□□□□ -0.35
RDH11-207ENST00000554731 TBC1D3IA0A087WXS9 549 aa12.88□□□□□ -0.35
RDH11-207ENST00000554731 TBC1D3EA0A087X179 549 aa12.88□□□□□ -0.35
RDH11-207ENST00000554731 TBC1D3KA0A087X1G2 549 aa12.88□□□□□ -0.35
RDH11-207ENST00000554731 TBC1D3FA6NER0 549 aaPredicted RBP12.88□□□□□ -0.35
RDH11-207ENST00000554731 EIF4E1BA6NMX2 242 aaKnown RBP12.88□□□□□ -0.35
RDH11-207ENST00000554731 TBC1D3LB9A6J9 549 aa12.88□□□□□ -0.35
RDH11-207ENST00000554731 F5H5T6 163 aa12.88□□□□□ -0.35
RDH11-207ENST00000554731 TLR4O00206 839 aa12.88□□□□□ -0.35
RDH11-207ENST00000554731 CBX4O00257 560 aa12.88□□□□□ -0.35
RDH11-207ENST00000554731 PLK4O00444 970 aa12.88□□□□□ -0.35
RDH11-207ENST00000554731 WNT9AO14904 365 aa12.88□□□□□ -0.35
RDH11-207ENST00000554731 RFPL3O75679 317 aa12.88□□□□□ -0.35
RDH11-207ENST00000554731 TRUB2O95900 331 aaKnown RBP12.88□□□□□ -0.35
RDH11-207ENST00000554731 IL1BP01584 269 aa12.88□□□□□ -0.35
RDH11-207ENST00000554731 TBC1D3HP0C7X1 549 aa12.88□□□□□ -0.35
RDH11-207ENST00000554731 KRT5P13647 590 aa12.88□□□□□ -0.35
RDH11-207ENST00000554731 MZF1P28698 734 aaPredicted RBP12.88□□□□□ -0.35
RDH11-207ENST00000554731 EPHA8P29322 1005 aaPredicted RBP12.88□□□□□ -0.35
RDH11-207ENST00000554731 STK19P49842 368 aaPredicted RBP12.88□□□□□ -0.35
RDH11-207ENST00000554731 SULT2A1Q06520 285 aa12.88□□□□□ -0.35
RDH11-207ENST00000554731 DNAJC3Q13217 504 aa12.88□□□□□ -0.35
RDH11-207ENST00000554731 SLC12A1Q13621 1099 aa12.88□□□□□ -0.35
RDH11-207ENST00000554731 SHBQ15464 509 aa12.88□□□□□ -0.35
RDH11-207ENST00000554731 MEA1Q16626 185 aa12.88□□□□□ -0.35
RDH11-207ENST00000554731 C6orf118Q5T5N4 469 aa12.88□□□□□ -0.35
RDH11-207ENST00000554731 TBC1D3GQ6DHY5 549 aa12.88□□□□□ -0.35
RDH11-207ENST00000554731 TBC1D3CQ6IPX1 549 aa12.88□□□□□ -0.35
RDH11-207ENST00000554731 TBC1D3Q8IZP1 549 aaPredicted RBP12.88□□□□□ -0.35
RDH11-207ENST00000554731 OXR1Q8N573 874 aa12.88□□□□□ -0.35
RDH11-207ENST00000554731 EID2Q8N6I1 236 aa12.88□□□□□ -0.35
RDH11-207ENST00000554731 ATP6V0D2Q8N8Y2 350 aa12.88□□□□□ -0.35
RDH11-207ENST00000554731 EHBP1Q8NDI1 1231 aa12.88□□□□□ -0.35
RDH11-207ENST00000554731 STK32AQ8WU08 396 aa12.88□□□□□ -0.35
RDH11-207ENST00000554731 PTPRN2Q92932 1015 aa12.88□□□□□ -0.35
RDH11-207ENST00000554731 KREMEN1Q96MU8 473 aa12.88□□□□□ -0.35
RDH11-207ENST00000554731 TIGD1Q96MW7 591 aa12.88□□□□□ -0.35
RDH11-207ENST00000554731 DCBLD2Q96PD2 775 aa12.88□□□□□ -0.35
RDH11-207ENST00000554731 SPAG5Q96R06 1193 aa12.88□□□□□ -0.35
RDH11-207ENST00000554731 MED15Q96RN5 788 aa12.88□□□□□ -0.35
RDH11-207ENST00000554731 SLC4A5Q9BY07 1137 aa12.88□□□□□ -0.35
RDH11-207ENST00000554731 POPDC2Q9HBU9 364 aa12.88□□□□□ -0.35
RDH11-207ENST00000554731 SLC12A6Q9UHW9 1150 aa12.88□□□□□ -0.35
RDH11-207ENST00000554731 PLXNA2O75051 1894 aa12.88□□□□□ -0.35
RDH11-207ENST00000554731 CELSR3Q9NYQ7 3312 aa12.88□□□□□ -0.35
RDH11-207ENST00000554731 COL5A1P20908 1838 aaPredicted RBP12.88□□□□□ -0.35
RDH11-207ENST00000554731 MED7O43513 233 aa12.87□□□□□ -0.35
RDH11-207ENST00000554731 LATO43561 262 aa12.87□□□□□ -0.35
RDH11-207ENST00000554731 CD44P16070 742 aaKnown RBP12.87□□□□□ -0.35
RDH11-207ENST00000554731 PDGFRAP16234 1089 aa12.87□□□□□ -0.35
RDH11-207ENST00000554731 ABCG1P45844 678 aa12.87□□□□□ -0.35
RDH11-207ENST00000554731 ACADVLP49748 655 aa12.87□□□□□ -0.35
RDH11-207ENST00000554731 OXCT1P55809 520 aa12.87□□□□□ -0.35
RDH11-207ENST00000554731 NXPH1P58417 271 aa12.87□□□□□ -0.35
RDH11-207ENST00000554731 PPP2CBP62714 309 aa12.87□□□□□ -0.35
RDH11-207ENST00000554731 YWHAZP63104 245 aaKnown RBP12.87□□□□□ -0.35
RDH11-207ENST00000554731 PPP2CAP67775 309 aa12.87□□□□□ -0.35
RDH11-207ENST00000554731 TTC39BQ5VTQ0 682 aaPredicted RBP12.87□□□□□ -0.35
RDH11-207ENST00000554731 ISM2Q6H9L7 571 aa12.87□□□□□ -0.35
RDH11-207ENST00000554731 NAPEPLDQ6IQ20 393 aa12.87□□□□□ -0.35
RDH11-207ENST00000554731 KLHL10Q6JEL2 608 aa12.87□□□□□ -0.35
RDH11-207ENST00000554731 TTI2Q6NXR4 508 aa12.87□□□□□ -0.35
RDH11-207ENST00000554731 DENND1BQ6P3S1 775 aa12.87□□□□□ -0.35
RDH11-207ENST00000554731 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.87□□□□□ -0.35
RDH11-207ENST00000554731 DSG4Q86SJ6 1040 aa12.87□□□□□ -0.35
RDH11-207ENST00000554731 PRPF39Q86UA1 669 aaKnown RBP12.87□□□□□ -0.35
RDH11-207ENST00000554731 CCAR2Q8N163 923 aaKnown RBP12.87□□□□□ -0.35
RDH11-207ENST00000554731 INTS2Q9H0H0 1204 aaKnown RBP12.87□□□□□ -0.35
RDH11-207ENST00000554731 KDM4CQ9H3R0 1056 aa12.87□□□□□ -0.35
RDH11-207ENST00000554731 THAP9Q9H5L6 903 aa12.87□□□□□ -0.35
RDH11-207ENST00000554731 ERVMER34-1Q9H9K5 563 aa12.87□□□□□ -0.35
RDH11-207ENST00000554731 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.87□□□□□ -0.35
RDH11-207ENST00000554731 CNTN6Q9UQ52 1028 aa12.87□□□□□ -0.35
RDH11-207ENST00000554731 A0A1B0GVM2 712 aa12.86□□□□□ -0.35
RDH11-207ENST00000554731 BICDL2A1A5D9 508 aa12.86□□□□□ -0.35
RDH11-207ENST00000554731 TCAF2A6NFQ2 919 aa12.86□□□□□ -0.35
RDH11-207ENST00000554731 KCNU1A8MYU2 1149 aa12.86□□□□□ -0.35
RDH11-207ENST00000554731 E5RJQ4 531 aa12.86□□□□□ -0.35
RDH11-207ENST00000554731 SLC7A4O43246 635 aa12.86□□□□□ -0.35
RDH11-207ENST00000554731 MAGEC1O60732 1142 aa12.86□□□□□ -0.35
RDH11-207ENST00000554731 LETM1O95202 739 aaPredicted RBP12.86□□□□□ -0.35
RDH11-207ENST00000554731 IGLV3-25P01717 112 aa12.86□□□□□ -0.35
RDH11-207ENST00000554731 SLC2A3P11169 496 aa12.86□□□□□ -0.35
RDH11-207ENST00000554731 VAV1P15498 845 aa12.86□□□□□ -0.35
RDH11-207ENST00000554731 DRD3P35462 400 aa12.86□□□□□ -0.35
RDH11-207ENST00000554731 NUDT1P36639 197 aa12.86□□□□□ -0.35
RDH11-207ENST00000554731 RXRGP48443 463 aa12.86□□□□□ -0.35
RDH11-207ENST00000554731 NUMBP49757 651 aa12.86□□□□□ -0.35
RDH11-207ENST00000554731 PLK1P53350 603 aa12.86□□□□□ -0.35
RDH11-207ENST00000554731 CLDN6P56747 220 aa12.86□□□□□ -0.35
RDH11-207ENST00000554731 KCNH2Q12809 1159 aa12.86□□□□□ -0.35
RDH11-207ENST00000554731 RABGAP1LQ5R372 815 aa12.86□□□□□ -0.35
RDH11-207ENST00000554731 FAM46CQ5VWP2 391 aa12.86□□□□□ -0.35
RDH11-207ENST00000554731 FOXR2Q6PJQ5 311 aa12.86□□□□□ -0.35
RDH11-207ENST00000554731 TMEM110Q86TL2 294 aa12.86□□□□□ -0.35
RDH11-207ENST00000554731 CIR1Q86X95 450 aaPredicted RBP12.86□□□□□ -0.35
RDH11-207ENST00000554731 TRIM59Q8IWR1 403 aa12.86□□□□□ -0.35
RDH11-207ENST00000554731 MFSD2AQ8NA29 543 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms