RNA–Protein interactions for RNA: ENST00000554336.5

TUBB3-205, Transcript of tubulin beta 3 class III, humanhuman

TSL 3 BASIC

Gene TUBB3, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-205ENST00000554336 ERMP1Q7Z2K6 904 aa17.72■□□□□ 0.43
TUBB3-205ENST00000554336 TFAP2DQ7Z6R9 452 aa17.72■□□□□ 0.43
TUBB3-205ENST00000554336 RHOT1Q8IXI2 618 aa17.72■□□□□ 0.43
TUBB3-205ENST00000554336 ALG3Q92685 438 aa17.72■□□□□ 0.43
TUBB3-205ENST00000554336 TBC1D31Q96DN5 1066 aa17.72■□□□□ 0.43
TUBB3-205ENST00000554336 EPAS1Q99814 870 aa17.72■□□□□ 0.43
TUBB3-205ENST00000554336 ZYG11BQ9C0D3 744 aa17.72■□□□□ 0.43
TUBB3-205ENST00000554336 C8orf33Q9H7E9 229 aaPredicted RBP17.72■□□□□ 0.43
TUBB3-205ENST00000554336 DNAJC17Q9NVM6 304 aaKnown RBP17.72■□□□□ 0.43
TUBB3-205ENST00000554336 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.72■□□□□ 0.43
TUBB3-205ENST00000554336 MRPS17Q9Y2R5 130 aaKnown RBP17.72■□□□□ 0.43
TUBB3-205ENST00000554336 MFHAS1Q9Y4C4 1052 aa17.72■□□□□ 0.43
TUBB3-205ENST00000554336 EEF2KO00418 725 aaKnown RBP17.71■□□□□ 0.43
TUBB3-205ENST00000554336 NCAM2O15394 837 aa17.71■□□□□ 0.43
TUBB3-205ENST00000554336 ZSCAN12O43309 604 aa17.71■□□□□ 0.43
TUBB3-205ENST00000554336 PSTPIP1O43586 416 aa17.71■□□□□ 0.43
TUBB3-205ENST00000554336 KRT1P04264 644 aa17.71■□□□□ 0.43
TUBB3-205ENST00000554336 KRT7P08729 469 aa17.71■□□□□ 0.43
TUBB3-205ENST00000554336 CHRM1P11229 460 aaPredicted RBP17.71■□□□□ 0.43
TUBB3-205ENST00000554336 CTNNA2P26232 953 aa17.71■□□□□ 0.43
TUBB3-205ENST00000554336 CDH6P55285 790 aa17.71■□□□□ 0.43
TUBB3-205ENST00000554336 TPI1P60174 286 aa17.71■□□□□ 0.43
TUBB3-205ENST00000554336 PON2Q15165 354 aa17.71■□□□□ 0.43
TUBB3-205ENST00000554336 IFI16Q16666 785 aaKnown RBP17.71■□□□□ 0.43
TUBB3-205ENST00000554336 LRRC31Q6UY01 552 aa17.71■□□□□ 0.43
TUBB3-205ENST00000554336 RFX8Q6ZV50 586 aa17.71■□□□□ 0.43
TUBB3-205ENST00000554336 CHST9Q7L1S5 443 aa17.71■□□□□ 0.43
TUBB3-205ENST00000554336 MFN1Q8IWA4 741 aa17.71■□□□□ 0.43
TUBB3-205ENST00000554336 CARNMT1Q8N4J0 409 aa17.71■□□□□ 0.43
TUBB3-205ENST00000554336 ZBTB44Q8NCP5 570 aa17.71■□□□□ 0.43
TUBB3-205ENST00000554336 NELL1Q92832 810 aa17.71■□□□□ 0.43
TUBB3-205ENST00000554336 CSPG4P5Q96PW8 444 aa17.71■□□□□ 0.43
TUBB3-205ENST00000554336 PRMT8Q9NR22 394 aaPredicted RBP17.71■□□□□ 0.43
TUBB3-205ENST00000554336 PCDHGA2Q9Y5H1 932 aa17.71■□□□□ 0.43
TUBB3-205ENST00000554336 ATG2BQ96BY7 2078 aa17.71■□□□□ 0.43
TUBB3-205ENST00000554336 NUP205Q92621 2012 aa17.71■□□□□ 0.42
TUBB3-205ENST00000554336 DDX3YO15523 660 aaKnown RBP17.7■□□□□ 0.42
TUBB3-205ENST00000554336 RHOQP17081 205 aa17.7■□□□□ 0.42
TUBB3-205ENST00000554336 EPHB2P29323 1055 aa17.7■□□□□ 0.42
TUBB3-205ENST00000554336 CD70P32970 193 aa17.7■□□□□ 0.42
TUBB3-205ENST00000554336 EIF2DP41214 584 aaKnown RBP17.7■□□□□ 0.42
TUBB3-205ENST00000554336 NUMBP49757 651 aa17.7■□□□□ 0.42
TUBB3-205ENST00000554336 PEX5P50542 639 aa17.7■□□□□ 0.42
TUBB3-205ENST00000554336 GALK1P51570 392 aa17.7■□□□□ 0.42
TUBB3-205ENST00000554336 CDH4P55283 916 aa17.7■□□□□ 0.42
TUBB3-205ENST00000554336 LMAN2Q12907 356 aa17.7■□□□□ 0.42
TUBB3-205ENST00000554336 GEN1Q17RS7 908 aa17.7■□□□□ 0.42
TUBB3-205ENST00000554336 TMEM215Q68D42 235 aa17.7■□□□□ 0.42
TUBB3-205ENST00000554336 FSTL4Q6MZW2 842 aa17.7■□□□□ 0.42
TUBB3-205ENST00000554336 RWDD4Q6NW29 188 aaKnown RBP17.7■□□□□ 0.42
TUBB3-205ENST00000554336 PEX26Q7Z412 305 aa17.7■□□□□ 0.42
TUBB3-205ENST00000554336 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.7■□□□□ 0.42
TUBB3-205ENST00000554336 FIBINQ8TAL6 211 aa17.7■□□□□ 0.42
TUBB3-205ENST00000554336 P2RY13Q9BPV8 354 aa17.7■□□□□ 0.42
TUBB3-205ENST00000554336 KLC2Q9H0B6 622 aa17.7■□□□□ 0.42
TUBB3-205ENST00000554336 NOL6Q9H6R4 1146 aaKnown RBP17.7■□□□□ 0.42
TUBB3-205ENST00000554336 ARHGEF4Q9NR80 690 aa17.7■□□□□ 0.42
TUBB3-205ENST00000554336 ABCB8Q9NUT2 735 aa17.7■□□□□ 0.42
TUBB3-205ENST00000554336 ETNK2Q9NVF9 386 aa17.7■□□□□ 0.42
TUBB3-205ENST00000554336 TMEM248Q9NWD8 314 aa17.7■□□□□ 0.42
TUBB3-205ENST00000554336 ZSCAN32Q9NX65 697 aa17.7■□□□□ 0.42
TUBB3-205ENST00000554336 INTS6Q9UL03 887 aaKnown RBP17.7■□□□□ 0.42
TUBB3-205ENST00000554336 TBC1D30Q9Y2I9 924 aa17.7■□□□□ 0.42
TUBB3-205ENST00000554336 CACNA1AO00555 2505 aa17.7■□□□□ 0.42
TUBB3-205ENST00000554336 TYW5A2RUC4 315 aaKnown RBP17.69■□□□□ 0.42
TUBB3-205ENST00000554336 LRRD1A4D1F6 860 aa17.69■□□□□ 0.42
TUBB3-205ENST00000554336 MAN2B1O00754 1011 aa17.69■□□□□ 0.42
TUBB3-205ENST00000554336 CLDN11O75508 207 aa17.69■□□□□ 0.42
TUBB3-205ENST00000554336 KDELR1P24390 212 aa17.69■□□□□ 0.42
TUBB3-205ENST00000554336 HCAR3P49019 387 aa17.69■□□□□ 0.42
TUBB3-205ENST00000554336 DGKGP49619 791 aa17.69■□□□□ 0.42
TUBB3-205ENST00000554336 CDH18Q13634 790 aa17.69■□□□□ 0.42
TUBB3-205ENST00000554336 KRT81Q14533 505 aa17.69■□□□□ 0.42
TUBB3-205ENST00000554336 TMEM196Q5HYL7 178 aa17.69■□□□□ 0.42
TUBB3-205ENST00000554336 DCAF12L1Q5VU92 463 aa17.69■□□□□ 0.42
TUBB3-205ENST00000554336 KIAA0907Q7Z7F0 614 aaPredicted RBP17.69■□□□□ 0.42
TUBB3-205ENST00000554336 KATNAL2Q8IYT4 538 aa17.69■□□□□ 0.42
TUBB3-205ENST00000554336 SYCE1Q8N0S2 351 aa17.69■□□□□ 0.42
TUBB3-205ENST00000554336 NPWQ8N729 165 aa17.69■□□□□ 0.42
TUBB3-205ENST00000554336 RTL3Q8N8U3 475 aaKnown RBP17.69■□□□□ 0.42
TUBB3-205ENST00000554336 TERB1Q8NA31 727 aa17.69■□□□□ 0.42
TUBB3-205ENST00000554336 FAM3CQ92520 227 aa17.69■□□□□ 0.42
TUBB3-205ENST00000554336 FAF2Q96CS3 445 aa17.69■□□□□ 0.42
TUBB3-205ENST00000554336 ALG14Q96F25 216 aa17.69■□□□□ 0.42
TUBB3-205ENST00000554336 MSANTD3Q96H12 275 aa17.69■□□□□ 0.42
TUBB3-205ENST00000554336 HES6Q96HZ4 224 aa17.69■□□□□ 0.42
TUBB3-205ENST00000554336 XPO6Q96QU8 1125 aaKnown RBP17.69■□□□□ 0.42
TUBB3-205ENST00000554336 ZNF670Q9BS34 389 aa17.69■□□□□ 0.42
TUBB3-205ENST00000554336 HERPUD2Q9BSE4 406 aa17.69■□□□□ 0.42
TUBB3-205ENST00000554336 CALN1Q9BXU9 219 aa17.69■□□□□ 0.42
TUBB3-205ENST00000554336 SLC2A11Q9BYW1 496 aa17.69■□□□□ 0.42
TUBB3-205ENST00000554336 CHRDQ9H2X0 955 aa17.69■□□□□ 0.42
TUBB3-205ENST00000554336 KCND1Q9NSA2 647 aa17.69■□□□□ 0.42
TUBB3-205ENST00000554336 DEC1Q9P2X7 70 aa17.69■□□□□ 0.42
TUBB3-205ENST00000554336 HCN2Q9UL51 889 aa17.69■□□□□ 0.42
TUBB3-205ENST00000554336 SLC27A6Q9Y2P4 619 aa17.69■□□□□ 0.42
TUBB3-205ENST00000554336 PCDHA3Q9Y5H8 950 aa17.69■□□□□ 0.42
TUBB3-205ENST00000554336 MYO18AQ92614 2054 aaKnown RBP17.68■□□□□ 0.42
TUBB3-205ENST00000554336 WASH4PA8MWX3 477 aa17.68■□□□□ 0.42
TUBB3-205ENST00000554336 PRRT4C9JH25 899 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms