RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 DRD1P21728 446 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 CD70P32970 193 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 HOXD13P35453 343 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 ARL4AP40617 200 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 GRIA2P42262 883 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 IL12RB1P42701 662 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 KIF11P52732 1056 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 MAPK10P53779 464 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 TPI1P60174 286 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 PRKCQQ04759 706 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 LRRC63Q05C16 580 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 USP4Q13107 963 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 ARHGEF7Q14155 803 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 ZNF234Q14588 700 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 POLD3Q15054 466 aaPredicted RBP2.58□□□□□ -2
PRPF39-205ENST00000554081 ACOX1Q15067 660 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 ZKSCAN8Q15776 578 aaPredicted RBP2.58□□□□□ -2
PRPF39-205ENST00000554081 STX1AQ16623 288 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 DNTTIP2Q5QJE6 756 aaKnown RBP2.58□□□□□ -2
PRPF39-205ENST00000554081 PHF19Q5T6S3 580 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 ARMC12Q5T9G4 340 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 STPG1Q5TH74 334 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 NCEH1Q6PIU2 408 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 ANKS1BQ7Z6G8 1248 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 ZC3H18Q86VM9 953 aaKnown RBP2.58□□□□□ -2
PRPF39-205ENST00000554081 UNC45BQ8IWX7 931 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 MLKLQ8NB16 471 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 ANKRD52Q8NB46 1076 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 SLC4A11Q8NBS3 891 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 LEMD2Q8NC56 503 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 EHBP1Q8NDI1 1231 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 FAM46DQ8NEK8 389 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 PDZD8Q8NEN9 1154 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 SVIPQ8NHG7 77 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 CFAP61Q8NHU2 1237 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 DQX1Q8TE96 717 aaKnown RBP2.58□□□□□ -2
PRPF39-205ENST00000554081 RXFP2Q8WXD0 754 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 SLC35C1Q96A29 364 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 HVCN1Q96D96 273 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 DHTKD1Q96HY7 919 aaPredicted RBP2.58□□□□□ -2
PRPF39-205ENST00000554081 PIWIL1Q96J94 861 aaKnown RBP2.58□□□□□ -2
PRPF39-205ENST00000554081 ZFRQ96KR1 1074 aaKnown RBP2.58□□□□□ -2
PRPF39-205ENST00000554081 CCDC42Q96M95 316 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 APOL2Q9BQE5 337 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 SCNM1Q9BWG6 230 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 YIPF2Q9BWQ6 316 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 LHX5Q9H2C1 402 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 GOLPH3Q9H4A6 298 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 MAGEF1Q9HAY2 307 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 ABCC13Q9NSE7 274 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 PIH1D1Q9NWS0 290 aaKnown RBP2.58□□□□□ -2
PRPF39-205ENST00000554081 WDR35Q9P2L0 1181 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 USP25Q9UHP3 1055 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 MBD1Q9UIS9 605 aaPredicted RBP2.58□□□□□ -2
PRPF39-205ENST00000554081 AGO1Q9UL18 857 aaKnown RBP2.58□□□□□ -2
PRPF39-205ENST00000554081 LUC7L2Q9Y383 392 aaKnown RBP2.58□□□□□ -2
PRPF39-205ENST00000554081 PRKAB1Q9Y478 270 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 SCN1AP35498 2009 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 HELZ2Q9BYK8 2649 aaKnown RBP2.58□□□□□ -2
PRPF39-205ENST00000554081 ITPR3Q14573 2671 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 SMTNL1A8MU46 457 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 B4DGG1 531 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 RNF225M0QZC1 329 aaPredicted RBP2.58□□□□□ -2
PRPF39-205ENST00000554081 M0QZQ0 153 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 KIAA0391O15091 583 aaKnown RBP2.58□□□□□ -2
PRPF39-205ENST00000554081 MAPK13O15264 365 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 CBFA2T2O43439 604 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 SIN3BO75182 1162 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 STC2O76061 302 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 CNTN5O94779 1100 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 MBD3O95983 291 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 FTLP02792 175 aaPredicted RBP2.58□□□□□ -2
PRPF39-205ENST00000554081 LINC00271P0C7V0 271 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 CHRNB1P11230 501 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 ENGP17813 658 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 NDUFV2P19404 249 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 GLDCP23378 1020 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 ARRB1P49407 418 aaPredicted RBP2.58□□□□□ -2
PRPF39-205ENST00000554081 ARL4DP49703 201 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 ZNF131P52739 623 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 AP3M2P53677 418 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 RAD23BP54727 409 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 CDH6P55285 790 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 TMPRSS15P98073 1019 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 FOXM1Q08050 763 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 EHHADHQ08426 723 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 CCDC173Q0VFZ6 552 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 SEPT6Q14141 434 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 KRT31Q15323 416 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 SPA17Q15506 151 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 TEAD4Q15561 434 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 MAN2A1Q16706 1144 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 DEFB133Q30KQ1 61 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 VWA3BQ502W6 1294 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 EFHC2Q5JST6 749 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 RABGAP1LQ5R372 815 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 CCDC183Q5T5S1 534 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 CWF19L1Q69YN2 538 aaKnown RBP2.58□□□□□ -2
PRPF39-205ENST00000554081 ATL3Q6DD88 541 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 FSTL4Q6MZW2 842 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms