RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 ARHGAP44Q17R89 818 aa6.82□□□□□ -1.32
SLIRP-203ENST00000554074 C5orf22Q49AR2 442 aa6.82□□□□□ -1.32
SLIRP-203ENST00000554074 ACBD5Q5T8D3 534 aaPredicted RBP6.82□□□□□ -1.32
SLIRP-203ENST00000554074 RNF219Q5W0B1 726 aaPredicted RBP6.82□□□□□ -1.32
SLIRP-203ENST00000554074 RAP1GAP2Q684P5 730 aa6.82□□□□□ -1.32
SLIRP-203ENST00000554074 GJB7Q6PEY0 223 aa6.82□□□□□ -1.32
SLIRP-203ENST00000554074 C11orf57Q6ZUT1 292 aaPredicted RBP6.82□□□□□ -1.32
SLIRP-203ENST00000554074 FAM71AQ8IYT1 594 aa6.82□□□□□ -1.32
SLIRP-203ENST00000554074 DEFB106AQ8N104 65 aa6.82□□□□□ -1.32
SLIRP-203ENST00000554074 CCAR2Q8N163 923 aaKnown RBP6.82□□□□□ -1.32
SLIRP-203ENST00000554074 CFAP52Q8N1V2 620 aa6.82□□□□□ -1.32
SLIRP-203ENST00000554074 SNX19Q92543 992 aa6.82□□□□□ -1.32
SLIRP-203ENST00000554074 PTPRN2Q92932 1015 aa6.82□□□□□ -1.32
SLIRP-203ENST00000554074 FAM131CQ96AQ9 280 aa6.82□□□□□ -1.32
SLIRP-203ENST00000554074 CDC6Q99741 560 aa6.82□□□□□ -1.32
SLIRP-203ENST00000554074 ORAI3Q9BRQ5 295 aa6.82□□□□□ -1.32
SLIRP-203ENST00000554074 NUP62CLQ9H1M0 184 aa6.82□□□□□ -1.32
SLIRP-203ENST00000554074 KDM4CQ9H3R0 1056 aa6.82□□□□□ -1.32
SLIRP-203ENST00000554074 FAM204AQ9H8W3 233 aa6.82□□□□□ -1.32
SLIRP-203ENST00000554074 TM9SF3Q9HD45 589 aa6.82□□□□□ -1.32
SLIRP-203ENST00000554074 SIX2Q9NPC8 291 aa6.82□□□□□ -1.32
SLIRP-203ENST00000554074 ACP6Q9NPH0 428 aa6.82□□□□□ -1.32
SLIRP-203ENST00000554074 DDIT4Q9NX09 232 aa6.82□□□□□ -1.32
SLIRP-203ENST00000554074 FBXL12Q9NXK8 326 aa6.82□□□□□ -1.32
SLIRP-203ENST00000554074 DACH1Q9UI36 760 aa6.82□□□□□ -1.32
SLIRP-203ENST00000554074 DNAJC12Q9UKB3 198 aa6.82□□□□□ -1.32
SLIRP-203ENST00000554074 KLK13Q9UKR3 277 aa6.82□□□□□ -1.32
SLIRP-203ENST00000554074 ZMIZ1Q9ULJ6 1067 aa6.82□□□□□ -1.32
SLIRP-203ENST00000554074 APOBEC2Q9Y235 224 aaKnown RBP6.82□□□□□ -1.32
SLIRP-203ENST00000554074 ANKRD6Q9Y2G4 727 aa6.82□□□□□ -1.32
SLIRP-203ENST00000554074 FNDC3AQ9Y2H6 1198 aaKnown RBP6.82□□□□□ -1.32
SLIRP-203ENST00000554074 CEP83Q9Y592 693 aa6.82□□□□□ -1.32
SLIRP-203ENST00000554074 DSPP15924 2871 aaKnown RBP6.82□□□□□ -1.32
SLIRP-203ENST00000554074 URB1O60287 2271 aaKnown RBP6.81□□□□□ -1.32
SLIRP-203ENST00000554074 TTC34A8MYJ7 566 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 ALOX15BO15296 676 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 MID1O15344 667 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 SLC7A4O43246 635 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 ATP9BO43861 1147 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 FTH1P19P0C7X4 201 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 HOXB3P14651 431 aaPredicted RBP6.81□□□□□ -1.32
SLIRP-203ENST00000554074 GOT1P17174 413 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 MZF1P28698 734 aaPredicted RBP6.81□□□□□ -1.32
SLIRP-203ENST00000554074 SLC8A1P32418 973 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 CLCN1P35523 988 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 KRT9P35527 623 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 NUDT1P36639 197 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 CTSOP43234 321 aaPredicted RBP6.81□□□□□ -1.32
SLIRP-203ENST00000554074 CTSKP43235 329 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 GRK6P43250 576 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 CCT8P50990 548 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 GALCP54803 685 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 PITX1P78337 314 aaPredicted RBP6.81□□□□□ -1.32
SLIRP-203ENST00000554074 SLC6A3Q01959 620 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 AUHQ13825 339 aaKnown RBP6.81□□□□□ -1.32
SLIRP-203ENST00000554074 COL9A2Q14055 689 aaPredicted RBP6.81□□□□□ -1.32
SLIRP-203ENST00000554074 TAF5Q15542 800 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 TPD52L1Q16890 204 aaPredicted RBP6.81□□□□□ -1.32
SLIRP-203ENST00000554074 KIF19Q2TAC6 998 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 KLHL40Q2TBA0 621 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 INAVAQ3KP66 663 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 PTPN20Q4JDL3 420 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 VWA3BQ502W6 1294 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 MIIPQ5JXC2 388 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 BRMS1LQ5PSV4 323 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 CCDC183Q5T5S1 534 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 CXorf57Q6NSI4 855 aaKnown RBP6.81□□□□□ -1.32
SLIRP-203ENST00000554074 DPY19L2P1Q6NXN4 242 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 FBXL22Q6P050 247 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 MMS22LQ6ZRQ5 1243 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 RBM43Q6ZSC3 357 aaKnown RBP6.81□□□□□ -1.32
SLIRP-203ENST00000554074 FAM183BPQ6ZVS7 135 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 SND1Q7KZF4 910 aaKnown RBP eCLIP6.81□□□□□ -1.326e-13■■□□□ 12.2
SLIRP-203ENST00000554074 ARCQ7LC44 396 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 DSG4Q86SJ6 1040 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 CREBRFQ8IUR6 639 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 MMAAQ8IVH4 418 aaKnown RBP6.81□□□□□ -1.32
SLIRP-203ENST00000554074 DHX40Q8IX18 779 aaKnown RBP6.81□□□□□ -1.32
SLIRP-203ENST00000554074 APCDD1Q8J025 514 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 CHCHD4Q8N4Q1 142 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 TMEM35BQ8NCS4 154 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 OR2T34Q8NGX1 318 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 SETD7Q8WTS6 366 aaKnown RBP6.81□□□□□ -1.32
SLIRP-203ENST00000554074 NT5C3BQ969T7 300 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 SKA1Q96BD8 255 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 ALG14Q96F25 216 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 PGAP3Q96FM1 320 aaPredicted RBP6.81□□□□□ -1.32
SLIRP-203ENST00000554074 CAMK1GQ96NX5 476 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 SPAG5Q96R06 1193 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 FAM129BQ96TA1 746 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 NPY6RQ99463 290 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 OMDQ99983 421 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 TUBGCP2Q9BSJ2 902 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 ACE2Q9BYF1 805 aaPredicted RBP6.81□□□□□ -1.32
SLIRP-203ENST00000554074 NDST4Q9H3R1 872 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 MTG2Q9H4K7 406 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 IL21RQ9HBE5 538 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 ARHGEF38Q9NXL2 777 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 SERGEFQ9UGK8 458 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 SLCO3A1Q9UIG8 710 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms