RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 PUM3Q15397 648 aaKnown RBP2.63□□□□□ -1.99
SRP54-204ENST00000553923 CNGA2Q16280 664 aa2.63□□□□□ -1.99
SRP54-204ENST00000553923 KIAA0753Q2KHM9 967 aa2.63□□□□□ -1.99
SRP54-204ENST00000553923 ZNF718Q3SXZ3 478 aa2.63□□□□□ -1.99
SRP54-204ENST00000553923 ZNF672Q499Z4 452 aaPredicted RBP2.63□□□□□ -1.99
SRP54-204ENST00000553923 JAKMIP3Q5VZ66 844 aa2.63□□□□□ -1.99
SRP54-204ENST00000553923 MEX3BQ6ZN04 569 aaKnown RBP2.63□□□□□ -1.99
SRP54-204ENST00000553923 LAS2Q8IYD9 372 aa2.63□□□□□ -1.99
SRP54-204ENST00000553923 FSTL5Q8N475 847 aaPredicted RBP2.63□□□□□ -1.99
SRP54-204ENST00000553923 CCDC89Q8N998 374 aa2.63□□□□□ -1.99
SRP54-204ENST00000553923 C1orf131Q8NDD1 294 aaKnown RBP2.63□□□□□ -1.99
SRP54-204ENST00000553923 PPHLN1Q8NEY8 458 aaKnown RBP2.63□□□□□ -1.99
SRP54-204ENST00000553923 ASB12Q8WXK4 309 aa2.63□□□□□ -1.99
SRP54-204ENST00000553923 HES6Q96HZ4 224 aa2.63□□□□□ -1.99
SRP54-204ENST00000553923 TBCBQ99426 244 aa2.63□□□□□ -1.99
SRP54-204ENST00000553923 HTATIP2Q9BUP3 242 aa2.63□□□□□ -1.99
SRP54-204ENST00000553923 NAA15Q9BXJ9 866 aaKnown RBP2.63□□□□□ -1.99
SRP54-204ENST00000553923 KRTAP4-3Q9BYR4 195 aa2.63□□□□□ -1.99
SRP54-204ENST00000553923 SPRY4Q9C004 299 aa2.63□□□□□ -1.99
SRP54-204ENST00000553923 ZCWPW1Q9H0M4 648 aa2.63□□□□□ -1.99
SRP54-204ENST00000553923 DDX31Q9H8H2 851 aaKnown RBP2.63□□□□□ -1.99
SRP54-204ENST00000553923 ERVK-5Q9HDB9 667 aa2.63□□□□□ -1.99
SRP54-204ENST00000553923 FNIP2Q9P278 1114 aa2.63□□□□□ -1.99
SRP54-204ENST00000553923 NRBP1Q9UHY1 535 aa2.63□□□□□ -1.99
SRP54-204ENST00000553923 IPO11Q9UI26 975 aaKnown RBP2.63□□□□□ -1.99
SRP54-204ENST00000553923 ITGB1BP2Q9UKP3 347 aa2.63□□□□□ -1.99
SRP54-204ENST00000553923 L1RE1Q9UN81 338 aa2.63□□□□□ -1.99
SRP54-204ENST00000553923 LRCH1Q9Y2L9 728 aa2.63□□□□□ -1.99
SRP54-204ENST00000553923 PCDHGB3Q9Y5G1 929 aa2.63□□□□□ -1.99
SRP54-204ENST00000553923 MMP24Q9Y5R2 645 aa2.63□□□□□ -1.99
SRP54-204ENST00000553923 hCG_1642624A0A1W2PR95 340 aa2.62□□□□□ -1.99
SRP54-204ENST00000553923 GAGE12JA6NER3 117 aa2.62□□□□□ -1.99
SRP54-204ENST00000553923 RHODO00212 210 aa2.62□□□□□ -1.99
SRP54-204ENST00000553923 INMTO95050 263 aa2.62□□□□□ -1.99
SRP54-204ENST00000553923 SP1P08047 785 aa2.62□□□□□ -1.99
SRP54-204ENST00000553923 RFPL3SP0C7P2 107 aa2.62□□□□□ -1.99
SRP54-204ENST00000553923 TNFAIP3P21580 790 aa2.62□□□□□ -1.99
SRP54-204ENST00000553923 YY1P25490 414 aa2.62□□□□□ -1.99
SRP54-204ENST00000553923 IGHMBP2P38935 993 aaKnown RBP2.62□□□□□ -1.99
SRP54-204ENST00000553923 CACNB3P54284 484 aa2.62□□□□□ -1.99
SRP54-204ENST00000553923 FMO1Q01740 532 aa2.62□□□□□ -1.99
SRP54-204ENST00000553923 EEF1A2Q05639 463 aaKnown RBP2.62□□□□□ -1.99
SRP54-204ENST00000553923 ILF3Q12906 894 aaKnown RBP eCLIP2.62□□□□□ -1.99
SRP54-204ENST00000553923 IFIT5Q13325 482 aaKnown RBP2.62□□□□□ -1.99
SRP54-204ENST00000553923 SIM2Q14190 667 aaPredicted RBP2.62□□□□□ -1.99
SRP54-204ENST00000553923 RBM39Q14498 530 aaKnown RBP2.62□□□□□ -1.99
SRP54-204ENST00000553923 KCTD2Q14681 263 aa2.62□□□□□ -1.99
SRP54-204ENST00000553923 ELF2Q15723 593 aa2.62□□□□□ -1.99
SRP54-204ENST00000553923 DHRS13Q6UX07 377 aa2.62□□□□□ -1.99
SRP54-204ENST00000553923 CLIP4Q8N3C7 705 aa2.62□□□□□ -1.99
SRP54-204ENST00000553923 MYCT1Q8N699 235 aa2.62□□□□□ -1.99
SRP54-204ENST00000553923 IPCEF1Q8WWN9 437 aaPredicted RBP2.62□□□□□ -1.99
SRP54-204ENST00000553923 ADAMTS14Q8WXS8 1223 aa2.62□□□□□ -1.99
SRP54-204ENST00000553923 LRTOMTQ8WZ04 291 aa2.62□□□□□ -1.99
SRP54-204ENST00000553923 SKA1Q96BD8 255 aa2.62□□□□□ -1.99
SRP54-204ENST00000553923 MPP4Q96JB8 637 aa2.62□□□□□ -1.99
SRP54-204ENST00000553923 C1QTNF4Q9BXJ3 329 aa2.62□□□□□ -1.99
SRP54-204ENST00000553923 LRRC27Q9C0I9 530 aa2.62□□□□□ -1.99
SRP54-204ENST00000553923 ZNF287Q9HBT7 754 aa2.62□□□□□ -1.99
SRP54-204ENST00000553923 ARFGAP3Q9NP61 516 aa2.62□□□□□ -1.99
SRP54-204ENST00000553923 DDX21Q9NR30 783 aaKnown RBP eCLIP2.62□□□□□ -1.99
SRP54-204ENST00000553923 SMC4Q9NTJ3 1288 aa2.62□□□□□ -1.99
SRP54-204ENST00000553923 RRN3Q9NYV6 651 aa2.62□□□□□ -1.99
SRP54-204ENST00000553923 CDC23Q9UJX2 597 aa2.62□□□□□ -1.99
SRP54-204ENST00000553923 FBXO2Q9UK22 296 aaPredicted RBP2.62□□□□□ -1.99
SRP54-204ENST00000553923 CORO2BQ9UQ03 480 aa2.62□□□□□ -1.99
SRP54-204ENST00000553923 FOXO6A8MYZ6 492 aa2.61□□□□□ -1.99
SRP54-204ENST00000553923 KPNA5O15131 536 aa2.61□□□□□ -1.99
SRP54-204ENST00000553923 KCNQ3O43525 872 aa2.61□□□□□ -1.99
SRP54-204ENST00000553923 TIMM44O43615 452 aa2.61□□□□□ -1.99
SRP54-204ENST00000553923 MGEA5O60502 916 aa2.61□□□□□ -1.99
SRP54-204ENST00000553923 RNASEH2AO75792 299 aaKnown RBP2.61□□□□□ -1.99
SRP54-204ENST00000553923 KRT36O76013 467 aa2.61□□□□□ -1.99
SRP54-204ENST00000553923 ZBED1O96006 694 aa2.61□□□□□ -1.99
SRP54-204ENST00000553923 GLUD1P00367 558 aa2.61□□□□□ -1.99
SRP54-204ENST00000553923 SLC5A1P13866 664 aa2.61□□□□□ -1.99
SRP54-204ENST00000553923 ZNF12P17014 697 aa2.61□□□□□ -1.99
SRP54-204ENST00000553923 CASP2P42575 452 aa2.61□□□□□ -1.99
SRP54-204ENST00000553923 CCT5P48643 541 aa2.61□□□□□ -1.99
SRP54-204ENST00000553923 GLUD2P49448 558 aa2.61□□□□□ -1.99
SRP54-204ENST00000553923 CARSP49589 748 aaKnown RBP2.61□□□□□ -1.99
SRP54-204ENST00000553923 SEC61A1P61619 476 aaKnown RBP2.61□□□□□ -1.99
SRP54-204ENST00000553923 POLD3Q15054 466 aaPredicted RBP2.61□□□□□ -1.99
SRP54-204ENST00000553923 ZRSR1Q15695 479 aaKnown RBP2.61□□□□□ -1.99
SRP54-204ENST00000553923 ANXA2RQ3ZCQ2 193 aa2.61□□□□□ -1.99
SRP54-204ENST00000553923 RNF220Q5VTB9 566 aa2.61□□□□□ -1.99
SRP54-204ENST00000553923 ACSM6Q6P461 480 aa2.61□□□□□ -1.99
SRP54-204ENST00000553923 GGT6Q6P531 493 aa2.61□□□□□ -1.99
SRP54-204ENST00000553923 ZNF449Q6P9G9 518 aa2.61□□□□□ -1.99
SRP54-204ENST00000553923 DARS2Q6PI48 645 aaKnown RBP2.61□□□□□ -1.99
SRP54-204ENST00000553923 LDHAL6AQ6ZMR3 332 aa2.61□□□□□ -1.99
SRP54-204ENST00000553923 Q6ZTK2 550 aa2.61□□□□□ -1.99
SRP54-204ENST00000553923 UNC13DQ70J99 1090 aa2.61□□□□□ -1.99
SRP54-204ENST00000553923 RSRC2Q7L4I2 434 aaKnown RBP2.61□□□□□ -1.99
SRP54-204ENST00000553923 SESTD1Q86VW0 696 aa2.61□□□□□ -1.99
SRP54-204ENST00000553923 EXD3Q8N9H8 876 aa2.61□□□□□ -1.99
SRP54-204ENST00000553923 SPATA5Q8NB90 893 aa2.61□□□□□ -1.99
SRP54-204ENST00000553923 OR52N4Q8NGI2 321 aa2.61□□□□□ -1.99
SRP54-204ENST00000553923 WBP2Q969T9 261 aa2.61□□□□□ -1.99
SRP54-204ENST00000553923 LTV1Q96GA3 475 aaPredicted RBP2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms