RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 NADK2Q4G0N4 442 aa12.54□□□□□ -0.4
SHMT2-207ENST00000553837 FBXL19Q6PCT2 694 aa12.54□□□□□ -0.4
SHMT2-207ENST00000553837 ZNF534Q76KX8 674 aa12.54□□□□□ -0.4
SHMT2-207ENST00000553837 CRLF3Q8IUI8 442 aa12.54□□□□□ -0.4
SHMT2-207ENST00000553837 ARID3BQ8IVW6 561 aaPredicted RBP12.54□□□□□ -0.4
SHMT2-207ENST00000553837 NUP93Q8N1F7 819 aa12.54□□□□□ -0.4
SHMT2-207ENST00000553837 PYROXD2Q8N2H3 581 aa12.54□□□□□ -0.4
SHMT2-207ENST00000553837 NETO2Q8NC67 525 aa12.54□□□□□ -0.4
SHMT2-207ENST00000553837 ARRDC4Q8NCT1 418 aa12.54□□□□□ -0.4
SHMT2-207ENST00000553837 BEST2Q8NFU1 509 aa12.54□□□□□ -0.4
SHMT2-207ENST00000553837 ZFP28Q8NHY6 868 aa12.54□□□□□ -0.4
SHMT2-207ENST00000553837 DNAJB3Q8WWF6 145 aa12.54□□□□□ -0.4
SHMT2-207ENST00000553837 CENPIQ92674 756 aaPredicted RBP12.54□□□□□ -0.4
SHMT2-207ENST00000553837 KCTD15Q96SI1 283 aaPredicted RBP12.54□□□□□ -0.4
SHMT2-207ENST00000553837 RBM38Q9H0Z9 239 aaKnown RBP12.54□□□□□ -0.4
SHMT2-207ENST00000553837 ABHD16BQ9H3Z7 469 aa12.54□□□□□ -0.4
SHMT2-207ENST00000553837 POPDC2Q9HBU9 364 aa12.54□□□□□ -0.4
SHMT2-207ENST00000553837 SMYD2Q9NRG4 433 aa12.54□□□□□ -0.4
SHMT2-207ENST00000553837 PAK5Q9P286 719 aa12.54□□□□□ -0.4
SHMT2-207ENST00000553837 MAD1L1Q9Y6D9 718 aa12.54□□□□□ -0.4
SHMT2-207ENST00000553837 PDCD11Q14690 1871 aaKnown RBP12.54□□□□□ -0.4
SHMT2-207ENST00000553837 COPEO14579 308 aa12.54□□□□□ -0.4
SHMT2-207ENST00000553837 UGT1A9O60656 530 aa12.54□□□□□ -0.4
SHMT2-207ENST00000553837 ZBED1O96006 694 aa12.54□□□□□ -0.4
SHMT2-207ENST00000553837 CYP2C9P11712 490 aa12.54□□□□□ -0.4
SHMT2-207ENST00000553837 SERPINB6P35237 376 aa12.54□□□□□ -0.4
SHMT2-207ENST00000553837 FDFT1P37268 417 aa12.54□□□□□ -0.4
SHMT2-207ENST00000553837 TMPRSS15P98073 1019 aa12.54□□□□□ -0.4
SHMT2-207ENST00000553837 ADRM1Q16186 407 aa12.54□□□□□ -0.4
SHMT2-207ENST00000553837 UBXN11Q5T124 520 aa12.54□□□□□ -0.4
SHMT2-207ENST00000553837 IQSEC1Q6DN90 963 aa12.54□□□□□ -0.4
SHMT2-207ENST00000553837 DUS1LQ6P1R4 473 aaKnown RBP12.54□□□□□ -0.4
SHMT2-207ENST00000553837 NOTUMQ6P988 496 aa12.54□□□□□ -0.4
SHMT2-207ENST00000553837 BORAQ6PGQ7 559 aa12.54□□□□□ -0.4
SHMT2-207ENST00000553837 TMC7Q7Z402 723 aa12.54□□□□□ -0.4
SHMT2-207ENST00000553837 CROCCP3Q8IVE0 287 aa12.54□□□□□ -0.4
SHMT2-207ENST00000553837 CEP70Q8NHQ1 597 aa12.54□□□□□ -0.4
SHMT2-207ENST00000553837 SNRNP27Q8WVK2 155 aaKnown RBP12.54□□□□□ -0.4
SHMT2-207ENST00000553837 E2F7Q96AV8 911 aa12.54□□□□□ -0.4
SHMT2-207ENST00000553837 TBCBQ99426 244 aa12.54□□□□□ -0.4
SHMT2-207ENST00000553837 ZNF670Q9BS34 389 aa12.54□□□□□ -0.4
SHMT2-207ENST00000553837 DHX35Q9H5Z1 703 aaKnown RBP12.54□□□□□ -0.4
SHMT2-207ENST00000553837 UGT1A7Q9HAW7 530 aa12.54□□□□□ -0.4
SHMT2-207ENST00000553837 UGT1A10Q9HAW8 530 aa12.54□□□□□ -0.4
SHMT2-207ENST00000553837 UGT1A8Q9HAW9 530 aa12.54□□□□□ -0.4
SHMT2-207ENST00000553837 TMPRSS4Q9NRS4 437 aa12.54□□□□□ -0.4
SHMT2-207ENST00000553837 SLC45A1Q9Y2W3 748 aa12.54□□□□□ -0.4
SHMT2-207ENST00000553837 TRIP12Q14669 1992 aaPredicted RBP12.54□□□□□ -0.4
SHMT2-207ENST00000553837 MBLAC1A4D2B0 266 aaPredicted RBP12.53□□□□□ -0.4
SHMT2-207ENST00000553837 SUPT3HO75486 399 aa12.53□□□□□ -0.4
SHMT2-207ENST00000553837 F2P00734 622 aa12.53□□□□□ -0.4
SHMT2-207ENST00000553837 APRTP07741 180 aa12.53□□□□□ -0.4
SHMT2-207ENST00000553837 INHBAP08476 426 aa12.53□□□□□ -0.4
SHMT2-207ENST00000553837 GRIA1P42261 906 aa12.53□□□□□ -0.4
SHMT2-207ENST00000553837 PTPN9P43378 593 aa12.53□□□□□ -0.4
SHMT2-207ENST00000553837 RPL34P49207 117 aaKnown RBP12.53□□□□□ -0.4
SHMT2-207ENST00000553837 GTF2A2P52657 109 aa12.53□□□□□ -0.4
SHMT2-207ENST00000553837 PITX1P78337 314 aaPredicted RBP12.53□□□□□ -0.4
SHMT2-207ENST00000553837 GSTM4Q03013 218 aa12.53□□□□□ -0.4
SHMT2-207ENST00000553837 BST1Q10588 318 aa12.53□□□□□ -0.4
SHMT2-207ENST00000553837 CBLBQ13191 982 aa12.53□□□□□ -0.4
SHMT2-207ENST00000553837 DPYSL2Q16555 572 aa12.53□□□□□ -0.4
SHMT2-207ENST00000553837 GRAMD1BQ3KR37 738 aa12.53□□□□□ -0.4
SHMT2-207ENST00000553837 SLC26A9Q7LBE3 791 aa12.53□□□□□ -0.4
SHMT2-207ENST00000553837 PLEKHH3Q7Z736 793 aa12.53□□□□□ -0.4
SHMT2-207ENST00000553837 UNC93AQ86WB7 457 aa12.53□□□□□ -0.4
SHMT2-207ENST00000553837 OSTM1Q86WC4 334 aa12.53□□□□□ -0.4
SHMT2-207ENST00000553837 CRYBG2Q8N1P7 616 aa12.53□□□□□ -0.4
SHMT2-207ENST00000553837 MPP5Q8N3R9 675 aa12.53□□□□□ -0.4
SHMT2-207ENST00000553837 ANKRD52Q8NB46 1076 aa12.53□□□□□ -0.4
SHMT2-207ENST00000553837 SLC2A14Q8TDB8 520 aa12.53□□□□□ -0.4
SHMT2-207ENST00000553837 ABHD8Q96I13 439 aa12.53□□□□□ -0.4
SHMT2-207ENST00000553837 FLRT1Q9NZU1 646 aa12.53□□□□□ -0.4
SHMT2-207ENST00000553837 CROTQ9UKG9 612 aa12.53□□□□□ -0.4
SHMT2-207ENST00000553837 GNEQ9Y223 722 aaKnown RBP12.53□□□□□ -0.4
SHMT2-207ENST00000553837 DTNAQ9Y4J8 743 aa12.53□□□□□ -0.4
SHMT2-207ENST00000553837 DOCK3Q8IZD9 2030 aa12.53□□□□□ -0.4
SHMT2-207ENST00000553837 RRN3P2A6NIE6 340 aa12.53□□□□□ -0.4
SHMT2-207ENST00000553837 KPNA7A9QM74 516 aa12.53□□□□□ -0.4
SHMT2-207ENST00000553837 TREHO43280 583 aa12.53□□□□□ -0.4
SHMT2-207ENST00000553837 TRMUO75648 421 aaKnown RBP12.53□□□□□ -0.4
SHMT2-207ENST00000553837 KRT38O76015 456 aa12.53□□□□□ -0.4
SHMT2-207ENST00000553837 STK10O94804 968 aaKnown RBP12.53□□□□□ -0.4
SHMT2-207ENST00000553837 KLHL2O95198 593 aa12.53□□□□□ -0.4
SHMT2-207ENST00000553837 TNFAIP8O95379 198 aa12.53□□□□□ -0.4
SHMT2-207ENST00000553837 C6orf222P0C671 652 aaPredicted RBP12.53□□□□□ -0.4
SHMT2-207ENST00000553837 PMLP29590 882 aa12.53□□□□□ -0.4
SHMT2-207ENST00000553837 GNL1P36915 607 aaPredicted RBP12.53□□□□□ -0.4
SHMT2-207ENST00000553837 MAGEA6P43360 314 aa12.53□□□□□ -0.4
SHMT2-207ENST00000553837 ACADVLP49748 655 aa12.53□□□□□ -0.4
SHMT2-207ENST00000553837 ADAM17P78536 824 aa12.53□□□□□ -0.4
SHMT2-207ENST00000553837 SLC25A3Q00325 362 aa12.53□□□□□ -0.4
SHMT2-207ENST00000553837 PPIDQ08752 370 aaKnown RBP12.53□□□□□ -0.4
SHMT2-207ENST00000553837 BST2Q10589 180 aaKnown RBP12.53□□□□□ -0.4
SHMT2-207ENST00000553837 TLR1Q15399 786 aa12.53□□□□□ -0.4
SHMT2-207ENST00000553837 MYLK3Q32MK0 819 aa12.53□□□□□ -0.4
SHMT2-207ENST00000553837 FBXO47Q5MNV8 452 aa12.53□□□□□ -0.4
SHMT2-207ENST00000553837 OGFRL1Q5TC84 451 aaPredicted RBP12.53□□□□□ -0.4
SHMT2-207ENST00000553837 PGM2L1Q6PCE3 622 aa12.53□□□□□ -0.4
SHMT2-207ENST00000553837 CDHR3Q6ZTQ4 885 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms