RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 CCDC130P13994 396 aa16.58■□□□□ 0.24
ACTN1-209ENST00000553659 MMP8P22894 467 aa16.58■□□□□ 0.24
ACTN1-209ENST00000553659 ZNF33AQ06730 810 aa16.58■□□□□ 0.24
ACTN1-209ENST00000553659 CUL1Q13616 776 aa16.58■□□□□ 0.24
ACTN1-209ENST00000553659 GRAMD4Q6IC98 578 aa16.58■□□□□ 0.24
ACTN1-209ENST00000553659 SDE2Q6IQ49 451 aa16.58■□□□□ 0.24
ACTN1-209ENST00000553659 SCARA5Q6ZMJ2 495 aa16.58■□□□□ 0.24
ACTN1-209ENST00000553659 RABEPKQ7Z6M1 372 aa16.58■□□□□ 0.24
ACTN1-209ENST00000553659 PIP4P1Q86T03 277 aa16.58■□□□□ 0.24
ACTN1-209ENST00000553659 UNC93AQ86WB7 457 aa16.58■□□□□ 0.24
ACTN1-209ENST00000553659 MIB1Q86YT6 1006 aa16.58■□□□□ 0.24
ACTN1-209ENST00000553659 DEFB119Q8N690 84 aa16.58■□□□□ 0.24
ACTN1-209ENST00000553659 SLC2A14Q8TDB8 520 aa16.58■□□□□ 0.24
ACTN1-209ENST00000553659 CPA5Q8WXQ8 436 aa16.58■□□□□ 0.24
ACTN1-209ENST00000553659 GATA6Q92908 595 aa16.58■□□□□ 0.24
ACTN1-209ENST00000553659 ELMO3Q96BJ8 720 aa16.58■□□□□ 0.24
ACTN1-209ENST00000553659 XPO6Q96QU8 1125 aaKnown RBP16.58■□□□□ 0.24
ACTN1-209ENST00000553659 KRT12Q99456 494 aa16.58■□□□□ 0.24
ACTN1-209ENST00000553659 GDF3Q9NR23 364 aa16.58■□□□□ 0.24
ACTN1-209ENST00000553659 DNAJC17Q9NVM6 304 aaKnown RBP16.58■□□□□ 0.24
ACTN1-209ENST00000553659 CALCOCO1Q9P1Z2 691 aa16.58■□□□□ 0.24
ACTN1-209ENST00000553659 WDR35Q9P2L0 1181 aa16.58■□□□□ 0.24
ACTN1-209ENST00000553659 RALYQ9UKM9 306 aaKnown RBP16.58■□□□□ 0.24
ACTN1-209ENST00000553659 ATXN2Q99700 1313 aaKnown RBP16.58■□□□□ 0.24
ACTN1-209ENST00000553659 PSTPIP1O43586 416 aa16.57■□□□□ 0.24
ACTN1-209ENST00000553659 CACNG3O60359 315 aa16.57■□□□□ 0.24
ACTN1-209ENST00000553659 ZNF217O75362 1048 aa16.57■□□□□ 0.24
ACTN1-209ENST00000553659 PROSCO94903 275 aa16.57■□□□□ 0.24
ACTN1-209ENST00000553659 HEXIM1O94992 359 aaKnown RBP16.57■□□□□ 0.24
ACTN1-209ENST00000553659 TBX18O95935 607 aa16.57■□□□□ 0.24
ACTN1-209ENST00000553659 FGGP02679 453 aa16.57■□□□□ 0.24
ACTN1-209ENST00000553659 CD58P19256 250 aa16.57■□□□□ 0.24
ACTN1-209ENST00000553659 RRM1P23921 792 aa16.57■□□□□ 0.24
ACTN1-209ENST00000553659 ATP5C1P36542 298 aaKnown RBP16.57■□□□□ 0.24
ACTN1-209ENST00000553659 WASP42768 502 aa16.57■□□□□ 0.24
ACTN1-209ENST00000553659 NDST1P52848 882 aa16.57■□□□□ 0.24
ACTN1-209ENST00000553659 ATXN3P54252 364 aaPredicted RBP16.57■□□□□ 0.24
ACTN1-209ENST00000553659 GSCP56915 257 aaPredicted RBP16.57■□□□□ 0.24
ACTN1-209ENST00000553659 MAP3K7CLP57077 242 aa16.57■□□□□ 0.24
ACTN1-209ENST00000553659 DHX34Q14147 1143 aaKnown RBP16.57■□□□□ 0.24
ACTN1-209ENST00000553659 EGFLAMQ63HQ2 1017 aa16.57■□□□□ 0.24
ACTN1-209ENST00000553659 HDDC3Q8N4P3 179 aa16.57■□□□□ 0.24
ACTN1-209ENST00000553659 PKNOX2Q96KN3 472 aa16.57■□□□□ 0.24
ACTN1-209ENST00000553659 C11orf70Q9BRQ4 267 aa16.57■□□□□ 0.24
ACTN1-209ENST00000553659 BBS2Q9BXC9 721 aa16.57■□□□□ 0.24
ACTN1-209ENST00000553659 CAPN10Q9HC96 672 aa16.57■□□□□ 0.24
ACTN1-209ENST00000553659 CYLDQ9NQC7 956 aa16.57■□□□□ 0.24
ACTN1-209ENST00000553659 SMARCAL1Q9NZC9 954 aa16.57■□□□□ 0.24
ACTN1-209ENST00000553659 MARK1Q9P0L2 795 aa16.57■□□□□ 0.24
ACTN1-209ENST00000553659 IP6K2Q9UHH9 426 aa16.57■□□□□ 0.24
ACTN1-209ENST00000553659 FRYQ5TBA9 3013 aa16.56■□□□□ 0.24
ACTN1-209ENST00000553659 IGHV1OR15-9A0A0B4J2B8 117 aa16.56■□□□□ 0.24
ACTN1-209ENST00000553659 FAM187AA6NFU0 413 aa16.56■□□□□ 0.24
ACTN1-209ENST00000553659 TMEM110-MUSTN1A8MSY1 372 aa16.56■□□□□ 0.24
ACTN1-209ENST00000553659 NEDD8-MDP1E9PL57 170 aa16.56■□□□□ 0.24
ACTN1-209ENST00000553659 ATMINO43313 823 aaPredicted RBP16.56■□□□□ 0.24
ACTN1-209ENST00000553659 CILPO75339 1184 aa16.56■□□□□ 0.24
ACTN1-209ENST00000553659 VDRP11473 427 aa16.56■□□□□ 0.24
ACTN1-209ENST00000553659 TYRP14679 529 aa16.56■□□□□ 0.24
ACTN1-209ENST00000553659 CETN2P41208 172 aa16.56■□□□□ 0.24
ACTN1-209ENST00000553659 PEX5P50542 639 aa16.56■□□□□ 0.24
ACTN1-209ENST00000553659 INCA1Q0VD86 236 aa16.56■□□□□ 0.24
ACTN1-209ENST00000553659 ORC1Q13415 861 aa16.56■□□□□ 0.24
ACTN1-209ENST00000553659 CASP8Q14790 479 aa16.56■□□□□ 0.24
ACTN1-209ENST00000553659 TPGS1Q6ZTW0 290 aa16.56■□□□□ 0.24
ACTN1-209ENST00000553659 CHPFQ8IZ52 775 aa16.56■□□□□ 0.24
ACTN1-209ENST00000553659 C12orf29Q8N999 325 aa16.56■□□□□ 0.24
ACTN1-209ENST00000553659 IPO4Q8TEX9 1081 aaKnown RBP16.56■□□□□ 0.24
ACTN1-209ENST00000553659 AENQ8WTP8 325 aaKnown RBP16.56■□□□□ 0.24
ACTN1-209ENST00000553659 CAVIN3Q969G5 261 aa16.56■□□□□ 0.24
ACTN1-209ENST00000553659 TMEM176AQ96HP8 235 aa16.56■□□□□ 0.24
ACTN1-209ENST00000553659 ACOX2Q99424 681 aa16.56■□□□□ 0.24
ACTN1-209ENST00000553659 GTPBP2Q9BX10 602 aaKnown RBP16.56■□□□□ 0.24
ACTN1-209ENST00000553659 RAB17Q9H0T7 212 aa16.56■□□□□ 0.24
ACTN1-209ENST00000553659 CD248Q9HCU0 757 aa16.56■□□□□ 0.24
ACTN1-209ENST00000553659 FSCN3Q9NQT6 498 aa16.56■□□□□ 0.24
ACTN1-209ENST00000553659 RASAL2Q9UJF2 1139 aa16.56■□□□□ 0.24
ACTN1-209ENST00000553659 LSM7Q9UK45 103 aaKnown RBP16.56■□□□□ 0.24
ACTN1-209ENST00000553659 SCML2Q9UQR0 700 aa16.56■□□□□ 0.24
ACTN1-209ENST00000553659 NEUROG3Q9Y4Z2 214 aa16.56■□□□□ 0.24
ACTN1-209ENST00000553659 CHD6Q8TD26 2715 aa16.56■□□□□ 0.24
ACTN1-209ENST00000553659 CACNA1EQ15878 2313 aa16.55■□□□□ 0.24
ACTN1-209ENST00000553659 SPAARA0A1B0GVQ0 90 aa16.55■□□□□ 0.24
ACTN1-209ENST00000553659 PRRT4C9JH25 899 aa16.55■□□□□ 0.24
ACTN1-209ENST00000553659 SART1O43290 800 aaKnown RBP16.55■□□□□ 0.24
ACTN1-209ENST00000553659 OPHN1O60890 802 aa16.55■□□□□ 0.24
ACTN1-209ENST00000553659 FAM200BP0CF97 657 aa16.55■□□□□ 0.24
ACTN1-209ENST00000553659 NDUFV2P19404 249 aa16.55■□□□□ 0.24
ACTN1-209ENST00000553659 CHRNA3P32297 505 aa16.55■□□□□ 0.24
ACTN1-209ENST00000553659 FAM193AP78312 1265 aa16.55■□□□□ 0.24
ACTN1-209ENST00000553659 MAMLD1Q13495 774 aa16.55■□□□□ 0.24
ACTN1-209ENST00000553659 KIAA1211LQ6NV74 962 aa16.55■□□□□ 0.24
ACTN1-209ENST00000553659 DNAJC24Q6P3W2 148 aa16.55■□□□□ 0.24
ACTN1-209ENST00000553659 KLHDC10Q6PID8 442 aa16.55■□□□□ 0.24
ACTN1-209ENST00000553659 MMS22LQ6ZRQ5 1243 aa16.55■□□□□ 0.24
ACTN1-209ENST00000553659 ERICH1Q86X53 443 aa16.55■□□□□ 0.24
ACTN1-209ENST00000553659 SLC41A1Q8IVJ1 513 aa16.55■□□□□ 0.24
ACTN1-209ENST00000553659 RHOT1Q8IXI2 618 aa16.55■□□□□ 0.24
ACTN1-209ENST00000553659 HNRNPABQ99729 332 aaKnown RBP16.55■□□□□ 0.24
ACTN1-209ENST00000553659 GABRG3Q99928 467 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms