RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 SERPINF2P08697 491 aa18.77■□□□□ 0.6
SHMT2-206ENST00000553529 ECT2LQ008S8 904 aa18.77■□□□□ 0.6
SHMT2-206ENST00000553529 KCNT1Q5JUK3 1230 aa18.77■□□□□ 0.6
SHMT2-206ENST00000553529 SPDYCQ5MJ68 293 aa18.77■□□□□ 0.6
SHMT2-206ENST00000553529 RNF219Q5W0B1 726 aaPredicted RBP18.77■□□□□ 0.6
SHMT2-206ENST00000553529 BNIPLQ7Z465 357 aa18.77■□□□□ 0.6
SHMT2-206ENST00000553529 AADATQ8N5Z0 425 aa18.77■□□□□ 0.6
SHMT2-206ENST00000553529 RSPH9Q9H1X1 276 aaPredicted RBP18.77■□□□□ 0.6
SHMT2-206ENST00000553529 EBF2Q9HAK2 575 aa18.77■□□□□ 0.6
SHMT2-206ENST00000553529 SLC6A14Q9UN76 642 aa18.77■□□□□ 0.6
SHMT2-206ENST00000553529 OR51B4Q9Y5P0 310 aa18.77■□□□□ 0.6
SHMT2-206ENST00000553529 TMEM131Q92545 1883 aa18.77■□□□□ 0.6
SHMT2-206ENST00000553529 ASCC3Q8N3C0 2202 aaKnown RBP18.76■□□□□ 0.59
SHMT2-206ENST00000553529 A0A0D9SEW6 157 aa18.76■□□□□ 0.59
SHMT2-206ENST00000553529 A0A1B0GVM2 712 aa18.76■□□□□ 0.59
SHMT2-206ENST00000553529 TCAF2A6NFQ2 919 aa18.76■□□□□ 0.59
SHMT2-206ENST00000553529 KCNK3O14649 394 aa18.76■□□□□ 0.59
SHMT2-206ENST00000553529 MBD3O95983 291 aa18.76■□□□□ 0.59
SHMT2-206ENST00000553529 MT-CO1P00395 513 aa18.76■□□□□ 0.59
SHMT2-206ENST00000553529 UNGP13051 313 aaPredicted RBP18.76■□□□□ 0.59
SHMT2-206ENST00000553529 GRIK2Q13002 908 aa18.76■□□□□ 0.59
SHMT2-206ENST00000553529 E4F1Q66K89 784 aaPredicted RBP18.76■□□□□ 0.59
SHMT2-206ENST00000553529 ZNF776Q68DI1 518 aaPredicted RBP18.76■□□□□ 0.59
SHMT2-206ENST00000553529 C1orf216Q8TAB5 229 aa18.76■□□□□ 0.59
SHMT2-206ENST00000553529 BIRC7Q96CA5 298 aa18.76■□□□□ 0.59
SHMT2-206ENST00000553529 SPAG5Q96R06 1193 aa18.76■□□□□ 0.59
SHMT2-206ENST00000553529 ORAI3Q9BRQ5 295 aa18.76■□□□□ 0.59
SHMT2-206ENST00000553529 PABPC3Q9H361 631 aaKnown RBP18.76■□□□□ 0.59
SHMT2-206ENST00000553529 WDCPQ9H6R7 721 aa18.76■□□□□ 0.59
SHMT2-206ENST00000553529 TAS2R14Q9NYV8 317 aa18.76■□□□□ 0.59
SHMT2-206ENST00000553529 SARDHQ9UL12 918 aa18.76■□□□□ 0.59
SHMT2-206ENST00000553529 ITIH6Q6UXX5 1313 aa18.75■□□□□ 0.59
SHMT2-206ENST00000553529 SPAARA0A1B0GVQ0 90 aa18.75■□□□□ 0.59
SHMT2-206ENST00000553529 ARHGAP33O14559 1287 aa18.75■□□□□ 0.59
SHMT2-206ENST00000553529 WNT9AO14904 365 aa18.75■□□□□ 0.59
SHMT2-206ENST00000553529 BNIP3LO60238 219 aa18.75■□□□□ 0.59
SHMT2-206ENST00000553529 SRGAP2O75044 1071 aa18.75■□□□□ 0.59
SHMT2-206ENST00000553529 FSBPO95073 299 aa18.75■□□□□ 0.59
SHMT2-206ENST00000553529 LSM8O95777 96 aaKnown RBP18.75■□□□□ 0.59
SHMT2-206ENST00000553529 DNTTP04053 509 aa18.75■□□□□ 0.59
SHMT2-206ENST00000553529 CDK11BP21127 795 aaKnown RBP18.75■□□□□ 0.59
SHMT2-206ENST00000553529 MMP8P22894 467 aa18.75■□□□□ 0.59
SHMT2-206ENST00000553529 STAT1P42224 750 aa18.75■□□□□ 0.59
SHMT2-206ENST00000553529 ST8SIA6P61647 398 aa18.75■□□□□ 0.59
SHMT2-206ENST00000553529 GFPT1Q06210 699 aaPredicted RBP18.75■□□□□ 0.59
SHMT2-206ENST00000553529 CST6Q15828 149 aa18.75■□□□□ 0.59
SHMT2-206ENST00000553529 SLC25A52Q3SY17 297 aa18.75■□□□□ 0.59
SHMT2-206ENST00000553529 CCDC14Q49A88 953 aa18.75■□□□□ 0.59
SHMT2-206ENST00000553529 RABGAP1LQ5R372 815 aa18.75■□□□□ 0.59
SHMT2-206ENST00000553529 LINGO4Q6UY18 593 aa18.75■□□□□ 0.59
SHMT2-206ENST00000553529 NEK11Q8NG66 645 aa18.75■□□□□ 0.59
SHMT2-206ENST00000553529 OR7D4Q8NG98 312 aa18.75■□□□□ 0.59
SHMT2-206ENST00000553529 FRS2Q8WU20 508 aa18.75■□□□□ 0.59
SHMT2-206ENST00000553529 RXFP2Q8WXD0 754 aa18.75■□□□□ 0.59
SHMT2-206ENST00000553529 DNASE2BQ8WZ79 361 aa18.75■□□□□ 0.59
SHMT2-206ENST00000553529 FEM1AQ9BSK4 669 aa18.75■□□□□ 0.59
SHMT2-206ENST00000553529 FUCA2Q9BTY2 467 aa18.75■□□□□ 0.59
SHMT2-206ENST00000553529 NUP58Q9BVL2 599 aa18.75■□□□□ 0.59
SHMT2-206ENST00000553529 IRX2Q9BZI1 471 aaPredicted RBP18.75■□□□□ 0.59
SHMT2-206ENST00000553529 NEUROG2Q9H2A3 272 aa18.75■□□□□ 0.59
SHMT2-206ENST00000553529 CAAP1Q9H8G2 361 aa18.75■□□□□ 0.59
SHMT2-206ENST00000553529 SLC12A6Q9UHW9 1150 aa18.75■□□□□ 0.59
SHMT2-206ENST00000553529 STAP1Q9ULZ2 295 aa18.75■□□□□ 0.59
SHMT2-206ENST00000553529 A0A1B0GVT2 93 aa18.74■□□□□ 0.59
SHMT2-206ENST00000553529 FAM72CH0Y354 149 aa18.74■□□□□ 0.59
SHMT2-206ENST00000553529 SEMA4FO95754 770 aa18.74■□□□□ 0.59
SHMT2-206ENST00000553529 ASLP04424 464 aa18.74■□□□□ 0.59
SHMT2-206ENST00000553529 IGHV4-34P06331 123 aa18.74■□□□□ 0.59
SHMT2-206ENST00000553529 SLC2A3P11169 496 aa18.74■□□□□ 0.59
SHMT2-206ENST00000553529 CSNK1EP49674 416 aaKnown RBP18.74■□□□□ 0.59
SHMT2-206ENST00000553529 ZNF252P-AS1Q0IIN9 211 aa18.74■□□□□ 0.59
SHMT2-206ENST00000553529 CLEC16AQ2KHT3 1053 aa18.74■□□□□ 0.59
SHMT2-206ENST00000553529 FAM72AQ5TYM5 149 aa18.74■□□□□ 0.59
SHMT2-206ENST00000553529 FAM72DQ6L9T8 149 aa18.74■□□□□ 0.59
SHMT2-206ENST00000553529 Q6ZVU0 165 aa18.74■□□□□ 0.59
SHMT2-206ENST00000553529 FAM72BQ86X60 149 aa18.74■□□□□ 0.59
SHMT2-206ENST00000553529 ZDHHC17Q8IUH5 632 aa18.74■□□□□ 0.59
SHMT2-206ENST00000553529 CCDC117Q8IWD4 279 aaPredicted RBP18.74■□□□□ 0.59
SHMT2-206ENST00000553529 CCDC185Q8N715 623 aa18.74■□□□□ 0.59
SHMT2-206ENST00000553529 GANCQ8TET4 914 aa18.74■□□□□ 0.59
SHMT2-206ENST00000553529 PGAP3Q96FM1 320 aaPredicted RBP18.74■□□□□ 0.59
SHMT2-206ENST00000553529 NAP1L5Q96NT1 182 aaPredicted RBP18.74■□□□□ 0.59
SHMT2-206ENST00000553529 ERGIC2Q96RQ1 377 aa18.74■□□□□ 0.59
SHMT2-206ENST00000553529 NDFIP2Q9NV92 336 aa18.74■□□□□ 0.59
SHMT2-206ENST00000553529 SEPT11Q9NVA2 429 aaKnown RBP18.74■□□□□ 0.59
SHMT2-206ENST00000553529 FBXL12Q9NXK8 326 aa18.74■□□□□ 0.59
SHMT2-206ENST00000553529 ZNF212Q9UDV6 495 aa18.74■□□□□ 0.59
SHMT2-206ENST00000553529 SUN2Q9UH99 717 aa18.74■□□□□ 0.59
SHMT2-206ENST00000553529 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.74■□□□□ 0.59
SHMT2-206ENST00000553529 TP53BP1Q12888 1972 aaPredicted RBP18.73■□□□□ 0.59
SHMT2-206ENST00000553529 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.73■□□□□ 0.59
SHMT2-206ENST00000553529 LRRC10BA6NIK2 292 aa18.73■□□□□ 0.59
SHMT2-206ENST00000553529 E9PAM4 449 aa18.73■□□□□ 0.59
SHMT2-206ENST00000553529 SMAD6O43541 496 aaKnown RBP18.73■□□□□ 0.59
SHMT2-206ENST00000553529 GJB3O75712 270 aa18.73■□□□□ 0.59
SHMT2-206ENST00000553529 RNASEH2AO75792 299 aaKnown RBP18.73■□□□□ 0.59
SHMT2-206ENST00000553529 SRPRAP08240 638 aaKnown RBP18.73■□□□□ 0.59
SHMT2-206ENST00000553529 CD59P13987 128 aa18.73■□□□□ 0.59
SHMT2-206ENST00000553529 PMLP29590 882 aa18.73■□□□□ 0.59
SHMT2-206ENST00000553529 PPP2CBP62714 309 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms